RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 PTCH1Q13635 1447 aa12.62□□□□□ -0.39
CALD1-210ENST00000443197 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
CALD1-210ENST00000443197 UNC5CLQ8IV45 518 aa12.62□□□□□ -0.39
CALD1-210ENST00000443197 NECAB1Q8N987 351 aa12.62□□□□□ -0.39
CALD1-210ENST00000443197 DBNDD2Q9BQY9 259 aa12.62□□□□□ -0.39
CALD1-210ENST00000443197 RAD21O60216 631 aa12.61□□□□□ -0.39
CALD1-210ENST00000443197 ZPR1O75312 459 aa12.61□□□□□ -0.39
CALD1-210ENST00000443197 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
CALD1-210ENST00000443197 FAM98CQ17RN3 349 aaKnown RBP12.61□□□□□ -0.39
CALD1-210ENST00000443197 RAI14Q9P0K7 980 aa12.61□□□□□ -0.39
CALD1-210ENST00000443197 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
CALD1-210ENST00000443197 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
CALD1-210ENST00000443197 ATP2B1P20020 1258 aa12.61□□□□□ -0.39
CALD1-210ENST00000443197 AKAP17AQ02040 695 aaKnown RBP12.61□□□□□ -0.39
CALD1-210ENST00000443197 CHAF1AQ13111 956 aaPredicted RBP12.61□□□□□ -0.39
CALD1-210ENST00000443197 KIF24Q5T7B8 1368 aa12.6□□□□□ -0.39
CALD1-210ENST00000443197 WDR33Q9C0J8 1336 aaKnown RBP12.6□□□□□ -0.39
CALD1-210ENST00000443197 NIP7Q9Y221 180 aaKnown RBP eCLIP12.6□□□□□ -0.39
CALD1-210ENST00000443197 MYOM1P52179 1685 aa12.6□□□□□ -0.39
CALD1-210ENST00000443197 RAB11FIP4Q86YS3 637 aa12.6□□□□□ -0.39
CALD1-210ENST00000443197 LIMCH1Q9UPQ0 1083 aa12.6□□□□□ -0.39
CALD1-210ENST00000443197 ERICH2A1L162 156 aa12.6□□□□□ -0.39
CALD1-210ENST00000443197 FAM227BQ96M60 508 aa12.6□□□□□ -0.39
CALD1-210ENST00000443197 HCLS1P14317 486 aaPredicted RBP12.59□□□□□ -0.39
CALD1-210ENST00000443197 MPNDQ8N594 471 aa12.59□□□□□ -0.39
CALD1-210ENST00000443197 AIDAQ96BJ3 306 aa12.59□□□□□ -0.39
CALD1-210ENST00000443197 EAF2Q96CJ1 260 aaPredicted RBP12.59□□□□□ -0.39
CALD1-210ENST00000443197 ZNF652Q9Y2D9 606 aa12.59□□□□□ -0.39
CALD1-210ENST00000443197 WDR17Q8IZU2 1322 aa12.59□□□□□ -0.39
CALD1-210ENST00000443197 DIP2AQ14689 1571 aa12.59□□□□□ -0.39
CALD1-210ENST00000443197 IRS4O14654 1257 aaPredicted RBP12.59□□□□□ -0.39
CALD1-210ENST00000443197 CCT2P78371 535 aaKnown RBP12.59□□□□□ -0.39
CALD1-210ENST00000443197 TRIM29Q14134 588 aa12.59□□□□□ -0.39
CALD1-210ENST00000443197 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
CALD1-210ENST00000443197 NOL10Q9BSC4 688 aaKnown RBP12.59□□□□□ -0.39
CALD1-210ENST00000443197 MAP2P11137 1827 aaKnown RBP12.58□□□□□ -0.4
CALD1-210ENST00000443197 ANKRD1Q15327 319 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 ATP2B3Q16720 1220 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 CCDC129Q6ZRS4 1044 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 SNX21Q969T3 373 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 PDCP20941 246 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 TDO2P48775 406 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 NASPP49321 788 aaPredicted RBP12.58□□□□□ -0.4
CALD1-210ENST00000443197 KCNQ4P56696 695 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 GUCY1B3Q02153 619 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 CCDC24Q8N4L8 307 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 C1orf167Q5SNV9 1468 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
CALD1-210ENST00000443197 FAM182BQ5T319 152 aa12.58□□□□□ -0.4
CALD1-210ENST00000443197 GNL3LQ9NVN8 582 aaKnown RBP12.58□□□□□ -0.4
CALD1-210ENST00000443197 MRE11P49959 708 aa12.57□□□□□ -0.4
CALD1-210ENST00000443197 KRT32Q14532 448 aa12.57□□□□□ -0.4
CALD1-210ENST00000443197 CRB1P82279 1406 aa12.57□□□□□ -0.4
CALD1-210ENST00000443197 ERVV-2B6SEH9 535 aa12.57□□□□□ -0.4
CALD1-210ENST00000443197 CHST3Q7LGC8 479 aa12.57□□□□□ -0.4
CALD1-210ENST00000443197 CCDC82Q8N4S0 544 aa12.57□□□□□ -0.4
CALD1-210ENST00000443197 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.42e-7■■■□□ 15.9
CALD1-210ENST00000443197 IMMTQ16891 758 aaKnown RBP12.57□□□□□ -0.4
CALD1-210ENST00000443197 TNNI3KQ59H18 835 aa12.57□□□□□ -0.4
CALD1-210ENST00000443197 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
CALD1-210ENST00000443197 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
CALD1-210ENST00000443197 FPGT-TNNI3KV9GXZ4 949 aa12.57□□□□□ -0.4
CALD1-210ENST00000443197 MINDY4BA8MYZ0 360 aa12.56□□□□□ -0.4
CALD1-210ENST00000443197 CD2BP2O95400 341 aaKnown RBP12.56□□□□□ -0.4
CALD1-210ENST00000443197 ZSCAN31Q96LW9 406 aaPredicted RBP12.56□□□□□ -0.4
CALD1-210ENST00000443197 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
CALD1-210ENST00000443197 PALD1Q9ULE6 856 aa12.56□□□□□ -0.4
CALD1-210ENST00000443197 RIMS1Q86UR5 1692 aaKnown RBP12.56□□□□□ -0.4
CALD1-210ENST00000443197 KDRP35968 1356 aa12.56□□□□□ -0.4
CALD1-210ENST00000443197 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
CALD1-210ENST00000443197 ZSCAN25Q6NSZ9 544 aa12.56□□□□□ -0.4
CALD1-210ENST00000443197 CREBRFQ8IUR6 639 aa12.56□□□□□ -0.4
CALD1-210ENST00000443197 RASSF8Q8NHQ8 419 aa12.56□□□□□ -0.4
CALD1-210ENST00000443197 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
CALD1-210ENST00000443197 PAG1Q9NWQ8 432 aa12.56□□□□□ -0.4
CALD1-210ENST00000443197 TLR7Q9NYK1 1049 aaKnown RBP12.56□□□□□ -0.4
CALD1-210ENST00000443197 CTNNA3Q9UI47 895 aa12.56□□□□□ -0.4
CALD1-210ENST00000443197 COL3A1P02461 1466 aaPredicted RBP12.55□□□□□ -0.4
CALD1-210ENST00000443197 MBD3O95983 291 aa12.55□□□□□ -0.4
CALD1-210ENST00000443197 GJB2P29033 226 aa12.55□□□□□ -0.4
CALD1-210ENST00000443197 AK2P54819 239 aa12.55□□□□□ -0.4
CALD1-210ENST00000443197 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
CALD1-210ENST00000443197 BRF1Q92994 677 aa12.55□□□□□ -0.4
CALD1-210ENST00000443197 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.55□□□□□ -0.4
CALD1-210ENST00000443197 CEP170BQ9Y4F5 1589 aaPredicted RBP12.55□□□□□ -0.4
CALD1-210ENST00000443197 SYCE3A1L190 88 aa12.55□□□□□ -0.4
CALD1-210ENST00000443197 SLC4A8Q2Y0W8 1093 aa12.55□□□□□ -0.4
CALD1-210ENST00000443197 NEK1Q96PY6 1258 aa12.55□□□□□ -0.4
CALD1-210ENST00000443197 TFIP11Q9UBB9 837 aaKnown RBP12.55□□□□□ -0.4
CALD1-210ENST00000443197 EYA2O00167 538 aa12.55□□□□□ -0.4
CALD1-210ENST00000443197 DHX16O60231 1041 aaKnown RBP12.55□□□□□ -0.4
CALD1-210ENST00000443197 SGSM2O43147 1006 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 SLC5A1P13866 664 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 ITGA6P23229 1130 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 NACAP1Q9BZK3 213 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 GRPEL1Q9HAV7 217 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 ZNF213O14771 459 aa12.54□□□□□ -0.4
CALD1-210ENST00000443197 KIAA2012Q0VF49 1180 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms