RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 KLRG2A4D1S0 409 aaPredicted RBP11.35□□□□□ -0.59
USP6NL-203ENST00000443016 PRELPP51888 382 aa11.35□□□□□ -0.59
USP6NL-203ENST00000443016 PARP10Q53GL7 1025 aa11.35□□□□□ -0.59
USP6NL-203ENST00000443016 CCDC93Q567U6 631 aa11.35□□□□□ -0.59
USP6NL-203ENST00000443016 XAGE3Q8WTP9 111 aa11.35□□□□□ -0.59
USP6NL-203ENST00000443016 DDX21Q9NR30 783 aaKnown RBP eCLIP11.35□□□□□ -0.59
USP6NL-203ENST00000443016 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
USP6NL-203ENST00000443016 COL11A2P13942 1736 aaPredicted RBP11.35□□□□□ -0.59
USP6NL-203ENST00000443016 GLTPD2A6NH11 291 aa11.35□□□□□ -0.59
USP6NL-203ENST00000443016 ZNF34Q8IZ26 560 aa11.35□□□□□ -0.59
USP6NL-203ENST00000443016 CHPF2Q9P2E5 772 aa11.35□□□□□ -0.59
USP6NL-203ENST00000443016 PCNTO95613 3336 aa11.34□□□□□ -0.59
USP6NL-203ENST00000443016 HSP90AB3PQ58FF7 597 aa11.34□□□□□ -0.59
USP6NL-203ENST00000443016 MBIPQ9NS73 344 aa11.34□□□□□ -0.59
USP6NL-203ENST00000443016 ABCC12Q96J65 1359 aa11.34□□□□□ -0.59
USP6NL-203ENST00000443016 IGSF3O75054 1194 aa11.34□□□□□ -0.59
USP6NL-203ENST00000443016 HOXB7P09629 217 aa11.34□□□□□ -0.59
USP6NL-203ENST00000443016 GNAI1P63096 354 aa11.34□□□□□ -0.59
USP6NL-203ENST00000443016 DUSP27Q5VZP5 1158 aa11.34□□□□□ -0.59
USP6NL-203ENST00000443016 LRP10Q7Z4F1 713 aa11.34□□□□□ -0.59
USP6NL-203ENST00000443016 UTP14AQ9BVJ6 771 aaKnown RBP11.34□□□□□ -0.59
USP6NL-203ENST00000443016 DBF4Q9UBU7 674 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-203ENST00000443016 SBF1O95248 1867 aa11.34□□□□□ -0.59
USP6NL-203ENST00000443016 ELL2O00472 640 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-203ENST00000443016 VEGFAP15692 232 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-203ENST00000443016 RTKN2Q8IZC4 609 aa11.33□□□□□ -0.6
USP6NL-203ENST00000443016 NLRP3Q96P20 1036 aa11.33□□□□□ -0.6
USP6NL-203ENST00000443016 MRS2Q9HD23 443 aa11.33□□□□□ -0.6
USP6NL-203ENST00000443016 LTBP3Q9NS15 1303 aa11.33□□□□□ -0.6
USP6NL-203ENST00000443016 NUP98P52948 1817 aa11.33□□□□□ -0.6
USP6NL-203ENST00000443016 SLX4Q8IY92 1834 aa11.33□□□□□ -0.6
USP6NL-203ENST00000443016 NTSR2O95665 410 aa11.33□□□□□ -0.6
USP6NL-203ENST00000443016 CRY2Q49AN0 593 aa11.33□□□□□ -0.6
USP6NL-203ENST00000443016 CCDC184Q52MB2 194 aa11.33□□□□□ -0.6
USP6NL-203ENST00000443016 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
USP6NL-203ENST00000443016 TMX4Q9H1E5 349 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-203ENST00000443016 IFT57Q9NWB7 429 aa11.33□□□□□ -0.6
USP6NL-203ENST00000443016 OLFM4Q6UX06 510 aa11.32□□□□□ -0.6
USP6NL-203ENST00000443016 C7orf43Q8WVR3 580 aa11.32□□□□□ -0.6
USP6NL-203ENST00000443016 IBTKQ9P2D0 1353 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-203ENST00000443016 TCERG1O14776 1098 aaKnown RBP11.32□□□□□ -0.6
USP6NL-203ENST00000443016 SLC4A2P04920 1241 aa11.32□□□□□ -0.6
USP6NL-203ENST00000443016 ANKRD13DQ6ZTN6 518 aa11.32□□□□□ -0.6
USP6NL-203ENST00000443016 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
USP6NL-203ENST00000443016 ZNF277Q9NRM2 450 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-203ENST00000443016 HYPKQ9NX55 129 aa11.32□□□□□ -0.6
USP6NL-203ENST00000443016 TRMT112Q9UI30 125 aaKnown RBP11.32□□□□□ -0.6
USP6NL-203ENST00000443016 FKBP4Q02790 459 aaKnown RBP eCLIP11.31□□□□□ -0.6
USP6NL-203ENST00000443016 TCIRG1Q13488 830 aa11.31□□□□□ -0.6
USP6NL-203ENST00000443016 ZNF428Q96B54 188 aa11.31□□□□□ -0.6
USP6NL-203ENST00000443016 CACNA1SQ13698 1873 aa11.31□□□□□ -0.6
USP6NL-203ENST00000443016 ARID3AQ99856 593 aa11.31□□□□□ -0.6
USP6NL-203ENST00000443016 ZNF853P0CG23 659 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 APLP1P51693 650 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 NLRP10Q86W26 655 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 PLBD2Q8NHP8 589 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 CHMP4AQ9BY43 222 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 HOXA10P31260 410 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-203ENST00000443016 FSTL1Q12841 308 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 CCDC88AQ3V6T2 1871 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 CC2D2BQ6DHV5 1058 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 SMC1BQ8NDV3 1235 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 SH3TC1Q8TE82 1336 aa11.3□□□□□ -0.6
USP6NL-203ENST00000443016 FER1L6Q2WGJ9 1857 aa11.29□□□□□ -0.6
USP6NL-203ENST00000443016 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-203ENST00000443016 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-203ENST00000443016 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-203ENST00000443016 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
USP6NL-203ENST00000443016 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
USP6NL-203ENST00000443016 SYNE4Q8N205 404 aa11.29□□□□□ -0.6
USP6NL-203ENST00000443016 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
USP6NL-203ENST00000443016 JDP2Q8WYK2 163 aa11.29□□□□□ -0.6
USP6NL-203ENST00000443016 CRAMP1Q96RY5 1269 aa11.29□□□□□ -0.6
USP6NL-203ENST00000443016 ATP5J2-PTCD1G3V325 749 aa11.29□□□□□ -0.6
USP6NL-203ENST00000443016 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-203ENST00000443016 C3orf67Q6ZVT6 689 aa11.29□□□□□ -0.6
USP6NL-203ENST00000443016 RIC1Q4ADV7 1423 aa11.28□□□□□ -0.6
USP6NL-203ENST00000443016 TIAM2Q8IVF5 1701 aa11.28□□□□□ -0.6
USP6NL-203ENST00000443016 IARSP41252 1262 aaKnown RBP11.28□□□□□ -0.6
USP6NL-203ENST00000443016 SLC10A5Q5PT55 438 aa11.28□□□□□ -0.6
USP6NL-203ENST00000443016 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-203ENST00000443016 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
USP6NL-203ENST00000443016 VASPP50552 380 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-203ENST00000443016 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
USP6NL-203ENST00000443016 DDX46Q7L014 1031 aaKnown RBP11.28□□□□□ -0.6
USP6NL-203ENST00000443016 C8orf58Q8NAV2 365 aa11.28□□□□□ -0.6
USP6NL-203ENST00000443016 PSMD1Q99460 953 aa11.28□□□□□ -0.6
USP6NL-203ENST00000443016 RTL5Q5HYW3 569 aaPredicted RBP11.27□□□□□ -0.61
USP6NL-203ENST00000443016 CCDC30Q5VVM6 783 aa11.27□□□□□ -0.61
USP6NL-203ENST00000443016 WWC1Q8IX03 1113 aa11.27□□□□□ -0.61
USP6NL-203ENST00000443016 TSR2Q969E8 191 aaKnown RBP11.27□□□□□ -0.61
USP6NL-203ENST00000443016 PHAXQ9H814 394 aaKnown RBP11.27□□□□□ -0.61
USP6NL-203ENST00000443016 ARFGEF2Q9Y6D5 1785 aa11.27□□□□□ -0.61
USP6NL-203ENST00000443016 IQCA1LA6NCM1 817 aa11.27□□□□□ -0.61
USP6NL-203ENST00000443016 FAM89AQ96GI7 184 aa11.27□□□□□ -0.61
USP6NL-203ENST00000443016 DDX58O95786 925 aaKnown RBP11.26□□□□□ -0.61
USP6NL-203ENST00000443016 CCDC27Q2M243 656 aa11.26□□□□□ -0.61
USP6NL-203ENST00000443016 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
USP6NL-203ENST00000443016 ABCC4O15439 1325 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms