RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CRY2Q49AN0 593 aa27.19■■□□□ 1.94
CDKN3-204ENST00000442975 ANKRD13DQ6ZTN6 518 aa27.19■■□□□ 1.94
CDKN3-204ENST00000442975 TAOK3Q9H2K8 898 aa27.19■■□□□ 1.94
CDKN3-204ENST00000442975 NCBP3Q53F19 620 aaKnown RBP27.18■■□□□ 1.94
CDKN3-204ENST00000442975 CCDC93Q567U6 631 aa27.18■■□□□ 1.94
CDKN3-204ENST00000442975 CCDC30Q5VVM6 783 aa27.17■■□□□ 1.94
CDKN3-204ENST00000442975 C3orf67Q6ZVT6 689 aa27.17■■□□□ 1.94
CDKN3-204ENST00000442975 TRMT112Q9UI30 125 aaKnown RBP27.17■■□□□ 1.94
CDKN3-204ENST00000442975 FANCIQ9NVI1 1328 aa27.16■■□□□ 1.94
CDKN3-204ENST00000442975 ALDH1B1P30837 517 aa27.16■■□□□ 1.94
CDKN3-204ENST00000442975 OLFM4Q6UX06 510 aa27.16■■□□□ 1.94
CDKN3-204ENST00000442975 PHAXQ9H814 394 aaKnown RBP27.16■■□□□ 1.94
CDKN3-204ENST00000442975 RNF123Q5XPI4 1314 aa27.16■■□□□ 1.94
CDKN3-204ENST00000442975 ATP5J2-PTCD1G3V325 749 aa27.15■■□□□ 1.94
CDKN3-204ENST00000442975 RIC3Q7Z5B4 369 aa27.15■■□□□ 1.94
CDKN3-204ENST00000442975 CHMP4AQ9BY43 222 aa27.15■■□□□ 1.94
CDKN3-204ENST00000442975 NMRK2Q9NPI5 230 aa27.15■■□□□ 1.94
CDKN3-204ENST00000442975 SLX4Q8IY92 1834 aa27.15■■□□□ 1.94
CDKN3-204ENST00000442975 TCERG1O14776 1098 aaKnown RBP27.14■■□□□ 1.94
CDKN3-204ENST00000442975 TWISTNBQ3B726 338 aaPredicted RBP27.14■■□□□ 1.94
CDKN3-204ENST00000442975 C7orf43Q8WVR3 580 aa27.14■■□□□ 1.94
CDKN3-204ENST00000442975 NLRP3Q96P20 1036 aa27.14■■□□□ 1.94
CDKN3-204ENST00000442975 KDM2BQ8NHM5 1336 aa27.14■■□□□ 1.93
CDKN3-204ENST00000442975 SH3TC1Q8TE82 1336 aa27.14■■□□□ 1.93
CDKN3-204ENST00000442975 LTBP3Q9NS15 1303 aa27.14■■□□□ 1.93
CDKN3-204ENST00000442975 ZC3H4Q9UPT8 1303 aaKnown RBP27.14■■□□□ 1.93
CDKN3-204ENST00000442975 HCLS1P14317 486 aaPredicted RBP27.13■■□□□ 1.93
CDKN3-204ENST00000442975 WDR63Q8IWG1 891 aa27.13■■□□□ 1.93
CDKN3-204ENST00000442975 RBM17Q96I25 401 aaKnown RBP27.13■■□□□ 1.93
CDKN3-204ENST00000442975 STK31Q9BXU1 1019 aa27.13■■□□□ 1.93
CDKN3-204ENST00000442975 ARFGEF2Q9Y6D5 1785 aa27.12■■□□□ 1.93
CDKN3-204ENST00000442975 KIF3CO14782 793 aa27.12■■□□□ 1.93
CDKN3-204ENST00000442975 SYNE4Q8N205 404 aa27.12■■□□□ 1.93
CDKN3-204ENST00000442975 CACNA1SQ13698 1873 aa27.12■■□□□ 1.93
CDKN3-204ENST00000442975 ANKRD36CQ5JPF3 1778 aa27.12■■□□□ 1.93
CDKN3-204ENST00000442975 HOXA10P31260 410 aaPredicted RBP27.11■■□□□ 1.93
CDKN3-204ENST00000442975 ISCA1Q9BUE6 129 aa27.11■■□□□ 1.93
CDKN3-204ENST00000442975 SLC10A5Q5PT55 438 aa27.1■■□□□ 1.93
CDKN3-204ENST00000442975 PPEF1O14829 653 aaPredicted RBP27.09■■□□□ 1.93
CDKN3-204ENST00000442975 DDX58O95786 925 aaKnown RBP27.09■■□□□ 1.93
CDKN3-204ENST00000442975 MYD88Q99836 296 aa27.09■■□□□ 1.93
CDKN3-204ENST00000442975 TIAM2Q8IVF5 1701 aa27.08■■□□□ 1.93
CDKN3-204ENST00000442975 FKBP4Q02790 459 aaKnown RBP eCLIP27.08■■□□□ 1.93
CDKN3-204ENST00000442975 RTL5Q5HYW3 569 aaPredicted RBP27.08■■□□□ 1.93
CDKN3-204ENST00000442975 RTKN2Q8IZC4 609 aa27.08■■□□□ 1.93
CDKN3-204ENST00000442975 FAM89AQ96GI7 184 aa27.08■■□□□ 1.93
CDKN3-204ENST00000442975 ZNF277Q9NRM2 450 aaPredicted RBP27.08■■□□□ 1.93
CDKN3-204ENST00000442975 CRAMP1Q96RY5 1269 aa27.07■■□□□ 1.92
CDKN3-204ENST00000442975 SLC51AQ86UW1 340 aa27.06■■□□□ 1.92
CDKN3-204ENST00000442975 MYH16Q9H6N6 1097 aa27.06■■□□□ 1.92
CDKN3-204ENST00000442975 ABCC4O15439 1325 aa27.06■■□□□ 1.92
CDKN3-204ENST00000442975 SBF1O95248 1867 aa27.06■■□□□ 1.92
CDKN3-204ENST00000442975 FER1L6Q2WGJ9 1857 aa27.05■■□□□ 1.92
CDKN3-204ENST00000442975 EXOSC9Q06265 439 aaKnown RBP27.05■■□□□ 1.92
CDKN3-204ENST00000442975 C16orf71Q8IYS4 520 aaPredicted RBP27.05■■□□□ 1.92
CDKN3-204ENST00000442975 SPINK5Q9NQ38 1064 aaPredicted RBP27.05■■□□□ 1.92
CDKN3-204ENST00000442975 GLTPD2A6NH11 291 aa27.04■■□□□ 1.92
CDKN3-204ENST00000442975 RRAGCQ9HB90 399 aa27.04■■□□□ 1.92
CDKN3-204ENST00000442975 MAP3K2Q9Y2U5 619 aa27.04■■□□□ 1.92
CDKN3-204ENST00000442975 DDX46Q7L014 1031 aaKnown RBP27.03■■□□□ 1.92
CDKN3-204ENST00000442975 SLC4A2P04920 1241 aa27.02■■□□□ 1.92
CDKN3-204ENST00000442975 TRIM28Q13263 835 aaKnown RBP27.02■■□□□ 1.92
CDKN3-204ENST00000442975 CC2D2BQ6DHV5 1058 aa27.02■■□□□ 1.92
CDKN3-204ENST00000442975 METTL22Q9BUU2 404 aaPredicted RBP27.02■■□□□ 1.92
CDKN3-204ENST00000442975 TMX4Q9H1E5 349 aaPredicted RBP27.02■■□□□ 1.92
CDKN3-204ENST00000442975 PI4KAP2A4QPH2 592 aa27.01■■□□□ 1.91
CDKN3-204ENST00000442975 G2E3Q7L622 706 aa27.01■■□□□ 1.91
CDKN3-204ENST00000442975 PI4KAP1Q8N8J0 262 aa27.01■■□□□ 1.91
CDKN3-204ENST00000442975 SNED1Q8TER0 1413 aa27■■□□□ 1.91
CDKN3-204ENST00000442975 IRS4O14654 1257 aaPredicted RBP27■■□□□ 1.91
CDKN3-204ENST00000442975 TOMM70O94826 608 aa27■■□□□ 1.91
CDKN3-204ENST00000442975 IARSP41252 1262 aaKnown RBP27■■□□□ 1.91
CDKN3-204ENST00000442975 DPY19L2Q6NUT2 758 aa27■■□□□ 1.91
CDKN3-204ENST00000442975 KSR2Q6VAB6 950 aa27■■□□□ 1.91
CDKN3-204ENST00000442975 CWC25Q9NXE8 425 aaPredicted RBP27■■□□□ 1.91
CDKN3-204ENST00000442975 ZBTB38Q8NAP3 1195 aaPredicted RBP26.99■■□□□ 1.91
CDKN3-204ENST00000442975 CCDC191Q8NCU4 936 aa26.99■■□□□ 1.91
CDKN3-204ENST00000442975 PSMD1Q99460 953 aa26.99■■□□□ 1.91
CDKN3-204ENST00000442975 FLIIQ13045 1269 aa26.98■■□□□ 1.91
CDKN3-204ENST00000442975 GRAPQ13588 217 aa26.98■■□□□ 1.91
CDKN3-204ENST00000442975 GRAPLQ8TC17 118 aaPredicted RBP26.98■■□□□ 1.91
CDKN3-204ENST00000442975 ATP6V0A2Q9Y487 856 aa26.98■■□□□ 1.91
CDKN3-204ENST00000442975 VAMP4O75379 141 aa26.97■■□□□ 1.91
CDKN3-204ENST00000442975 NEXNQ0ZGT2 675 aa26.97■■□□□ 1.91
CDKN3-204ENST00000442975 ZNF521Q96K83 1311 aa26.96■■□□□ 1.91
CDKN3-204ENST00000442975 CCER2I3L3R5 266 aa26.96■■□□□ 1.91
CDKN3-204ENST00000442975 FKBP5Q13451 457 aaPredicted RBP26.96■■□□□ 1.91
CDKN3-204ENST00000442975 JARID2Q92833 1246 aaPredicted RBP26.96■■□□□ 1.91
CDKN3-204ENST00000442975 BBOX1O75936 387 aa26.95■■□□□ 1.9
CDKN3-204ENST00000442975 GRIPAP1Q4V328 841 aa26.95■■□□□ 1.9
CDKN3-204ENST00000442975 ZNF541Q9H0D2 1346 aa26.94■■□□□ 1.9
CDKN3-204ENST00000442975 DDNO94850 711 aaPredicted RBP26.94■■□□□ 1.9
CDKN3-204ENST00000442975 PCCAP05165 728 aaPredicted RBP26.94■■□□□ 1.9
CDKN3-204ENST00000442975 HSP90B1P14625 803 aaKnown RBP26.94■■□□□ 1.9
CDKN3-204ENST00000442975 VEGFAP15692 232 aaPredicted RBP26.94■■□□□ 1.9
CDKN3-204ENST00000442975 LAMB2P55268 1798 aa26.94■■□□□ 1.9
CDKN3-204ENST00000442975 DDX60Q8IY21 1712 aaKnown RBP26.93■■□□□ 1.9
CDKN3-204ENST00000442975 IGKV5-2P06315 115 aa26.93■■□□□ 1.9
CDKN3-204ENST00000442975 SF3B3Q15393 1217 aaKnown RBP26.93■■□□□ 1.9
CDKN3-204ENST00000442975 CWF19L2Q2TBE0 894 aaKnown RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms