RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 NBPF5PQ86XG9 351 aaPredicted RBP17.16■□□□□ 0.34
TM9SF4-204ENST00000442842 ITPRIPQ8IWB1 547 aa17.16■□□□□ 0.34
TM9SF4-204ENST00000442842 MS4A1P11836 297 aa17.15■□□□□ 0.34
TM9SF4-204ENST00000442842 TM4SF1P30408 202 aa17.15■□□□□ 0.34
TM9SF4-204ENST00000442842 RTL5Q5HYW3 569 aaPredicted RBP17.15■□□□□ 0.34
TM9SF4-204ENST00000442842 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
TM9SF4-204ENST00000442842 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.34
TM9SF4-204ENST00000442842 SERPINB2P05120 415 aa17.14■□□□□ 0.33
TM9SF4-204ENST00000442842 GTF2E1P29083 439 aaPredicted RBP17.14■□□□□ 0.33
TM9SF4-204ENST00000442842 NUTM1Q86Y26 1132 aa17.14■□□□□ 0.33
TM9SF4-204ENST00000442842 CCDC24Q8N4L8 307 aa17.14■□□□□ 0.33
TM9SF4-204ENST00000442842 CNBD1Q8NA66 436 aa17.14■□□□□ 0.33
TM9SF4-204ENST00000442842 CCDC191Q8NCU4 936 aa17.14■□□□□ 0.33
TM9SF4-204ENST00000442842 JARID2Q92833 1246 aaPredicted RBP17.14■□□□□ 0.33
TM9SF4-204ENST00000442842 UTP14AQ9BVJ6 771 aaKnown RBP17.14■□□□□ 0.33
TM9SF4-204ENST00000442842 TRMT112Q9UI30 125 aaKnown RBP17.14■□□□□ 0.33
TM9SF4-204ENST00000442842 N4BP2Q86UW6 1770 aaPredicted RBP17.13■□□□□ 0.33
TM9SF4-204ENST00000442842 ALDH1L1O75891 902 aa17.13■□□□□ 0.33
TM9SF4-204ENST00000442842 NTSR2O95665 410 aa17.13■□□□□ 0.33
TM9SF4-204ENST00000442842 GCKRQ14397 625 aa17.13■□□□□ 0.33
TM9SF4-204ENST00000442842 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
TM9SF4-204ENST00000442842 SPON1Q9HCB6 807 aa17.13■□□□□ 0.33
TM9SF4-204ENST00000442842 IBTKQ9P2D0 1353 aaPredicted RBP17.13■□□□□ 0.33
TM9SF4-204ENST00000442842 ST5P78524 1137 aa17.12■□□□□ 0.33
TM9SF4-204ENST00000442842 TRIM28Q13263 835 aaKnown RBP17.12■□□□□ 0.33
TM9SF4-204ENST00000442842 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
TM9SF4-204ENST00000442842 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
TM9SF4-204ENST00000442842 ABCC12Q96J65 1359 aa17.12■□□□□ 0.33
TM9SF4-204ENST00000442842 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
TM9SF4-204ENST00000442842 ERFEQ4G0M1 354 aa17.11■□□□□ 0.33
TM9SF4-204ENST00000442842 PRR5LQ6MZQ0 368 aa17.11■□□□□ 0.33
TM9SF4-204ENST00000442842 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
TM9SF4-204ENST00000442842 FAM89AQ96GI7 184 aa17.11■□□□□ 0.33
TM9SF4-204ENST00000442842 C9orf78Q9NZ63 289 aaPredicted RBP17.11■□□□□ 0.33
TM9SF4-204ENST00000442842 RNF123Q5XPI4 1314 aa17.11■□□□□ 0.33
TM9SF4-204ENST00000442842 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
TM9SF4-204ENST00000442842 GRM8O00222 908 aa17.1■□□□□ 0.33
TM9SF4-204ENST00000442842 PTGER2P43116 358 aa17.1■□□□□ 0.33
TM9SF4-204ENST00000442842 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
TM9SF4-204ENST00000442842 MVPQ14764 893 aaKnown RBP17.1■□□□□ 0.33
TM9SF4-204ENST00000442842 TPTE2Q6XPS3 522 aa17.1■□□□□ 0.33
TM9SF4-204ENST00000442842 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
TM9SF4-204ENST00000442842 ZBTB38Q8NAP3 1195 aaPredicted RBP17.1■□□□□ 0.33
TM9SF4-204ENST00000442842 PCCAP05165 728 aaPredicted RBP17.09■□□□□ 0.33
TM9SF4-204ENST00000442842 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
TM9SF4-204ENST00000442842 MEIS3Q99687 375 aa17.09■□□□□ 0.33
TM9SF4-204ENST00000442842 SGIP1Q9BQI5 828 aa17.09■□□□□ 0.33
TM9SF4-204ENST00000442842 PPP1R1BQ9UD71 204 aaPredicted RBP17.09■□□□□ 0.33
TM9SF4-204ENST00000442842 C10orf71Q711Q0 1435 aa17.08■□□□□ 0.32
TM9SF4-204ENST00000442842 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
TM9SF4-204ENST00000442842 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
TM9SF4-204ENST00000442842 TNRC6CQ9HCJ0 1690 aaKnown RBP17.07■□□□□ 0.32
TM9SF4-204ENST00000442842 IRS4O14654 1257 aaPredicted RBP17.07■□□□□ 0.32
TM9SF4-204ENST00000442842 NBPF7P0C2Y1 421 aaPredicted RBP17.07■□□□□ 0.32
TM9SF4-204ENST00000442842 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
TM9SF4-204ENST00000442842 HCLS1P14317 486 aaPredicted RBP17.07■□□□□ 0.32
TM9SF4-204ENST00000442842 H7C1W4 665 aa17.06■□□□□ 0.32
TM9SF4-204ENST00000442842 SUCLG2Q96I99 432 aa17.06■□□□□ 0.32
TM9SF4-204ENST00000442842 USP44Q9H0E7 712 aa17.06■□□□□ 0.32
TM9SF4-204ENST00000442842 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
TM9SF4-204ENST00000442842 CDHR2Q9BYE9 1310 aa17.05■□□□□ 0.32
TM9SF4-204ENST00000442842 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
TM9SF4-204ENST00000442842 LAMB2P55268 1798 aa17.05■□□□□ 0.32
TM9SF4-204ENST00000442842 GNAI3P08754 354 aa17.04■□□□□ 0.32
TM9SF4-204ENST00000442842 CASP7P55210 303 aa17.04■□□□□ 0.32
TM9SF4-204ENST00000442842 C3orf67Q6ZVT6 689 aa17.04■□□□□ 0.32
TM9SF4-204ENST00000442842 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
TM9SF4-204ENST00000442842 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
TM9SF4-204ENST00000442842 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
TM9SF4-204ENST00000442842 UTYO14607 1347 aa17.03■□□□□ 0.32
TM9SF4-204ENST00000442842 LRRFIP2Q9Y608 721 aaKnown RBP17.03■□□□□ 0.32
TM9SF4-204ENST00000442842 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
TM9SF4-204ENST00000442842 PDE8AO60658 829 aa17.02■□□□□ 0.32
TM9SF4-204ENST00000442842 HSP90B1P14625 803 aaKnown RBP17.02■□□□□ 0.32
TM9SF4-204ENST00000442842 CTSWP56202 376 aa17.02■□□□□ 0.32
TM9SF4-204ENST00000442842 NLRP3Q96P20 1036 aa17.02■□□□□ 0.32
TM9SF4-204ENST00000442842 BRIP1Q9BX63 1249 aa17.02■□□□□ 0.32
TM9SF4-204ENST00000442842 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
TM9SF4-204ENST00000442842 LRP5O75197 1615 aa17.01■□□□□ 0.31
TM9SF4-204ENST00000442842 GNAI2P04899 355 aa17.01■□□□□ 0.31
TM9SF4-204ENST00000442842 NEFLP07196 543 aa17.01■□□□□ 0.31
TM9SF4-204ENST00000442842 PDE6BP35913 854 aa17.01■□□□□ 0.31
TM9SF4-204ENST00000442842 EXOC6Q8TAG9 804 aa17.01■□□□□ 0.31
TM9SF4-204ENST00000442842 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
TM9SF4-204ENST00000442842 COL11A2P13942 1736 aaPredicted RBP17■□□□□ 0.31
TM9SF4-204ENST00000442842 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
TM9SF4-204ENST00000442842 SLC10A5Q5PT55 438 aa17■□□□□ 0.31
TM9SF4-204ENST00000442842 C2CD5Q86YS7 1000 aa17■□□□□ 0.31
TM9SF4-204ENST00000442842 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
TM9SF4-204ENST00000442842 CHMP4BQ9H444 224 aaKnown RBP17■□□□□ 0.31
TM9SF4-204ENST00000442842 ANKRD31Q8N7Z5 1873 aa16.99■□□□□ 0.31
TM9SF4-204ENST00000442842 CHRNA5P30532 468 aa16.99■□□□□ 0.31
TM9SF4-204ENST00000442842 FOXO4P98177 505 aa16.99■□□□□ 0.31
TM9SF4-204ENST00000442842 KAZALD1Q96I82 304 aa16.99■□□□□ 0.31
TM9SF4-204ENST00000442842 FHDC1Q9C0D6 1143 aaPredicted RBP16.99■□□□□ 0.31
TM9SF4-204ENST00000442842 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
TM9SF4-204ENST00000442842 CCDC152Q4G0S7 254 aa16.98■□□□□ 0.31
TM9SF4-204ENST00000442842 LMBR1LQ6UX01 489 aa16.98■□□□□ 0.31
TM9SF4-204ENST00000442842 PLA2G12BQ9BX93 195 aa16.98■□□□□ 0.31
TM9SF4-204ENST00000442842 HDAC5Q9UQL6 1122 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms