RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 NLRP10Q86W26 655 aa28.63■■■□□ 2.17
HDLBP-220ENST00000442730 C7orf43Q8WVR3 580 aa28.63■■■□□ 2.17
HDLBP-220ENST00000442730 UTP14AQ9BVJ6 771 aaKnown RBP28.63■■■□□ 2.17
HDLBP-220ENST00000442730 RNF123Q5XPI4 1314 aa28.63■■■□□ 2.17
HDLBP-220ENST00000442730 TSPYL6Q8N831 410 aa28.62■■■□□ 2.17
HDLBP-220ENST00000442730 TIAM2Q8IVF5 1701 aa28.62■■■□□ 2.17
HDLBP-220ENST00000442730 SOGA3Q5TF21 947 aa28.61■■■□□ 2.17
HDLBP-220ENST00000442730 ANKRD13DQ6ZTN6 518 aa28.61■■■□□ 2.17
HDLBP-220ENST00000442730 LTBP3Q9NS15 1303 aa28.61■■■□□ 2.17
HDLBP-220ENST00000442730 ZC3H4Q9UPT8 1303 aaKnown RBP28.61■■■□□ 2.17
HDLBP-220ENST00000442730 C3orf67Q6ZVT6 689 aa28.6■■■□□ 2.17
HDLBP-220ENST00000442730 TAOK3Q9H2K8 898 aa28.59■■■□□ 2.17
HDLBP-220ENST00000442730 SALL2Q9Y467 1007 aaPredicted RBP28.59■■■□□ 2.17
HDLBP-220ENST00000442730 FANCIQ9NVI1 1328 aa28.59■■■□□ 2.17
HDLBP-220ENST00000442730 ALDH1B1P30837 517 aa28.58■■■□□ 2.17
HDLBP-220ENST00000442730 HOXA10P31260 410 aaPredicted RBP28.58■■■□□ 2.17
HDLBP-220ENST00000442730 SLC10A5Q5PT55 438 aa28.58■■■□□ 2.17
HDLBP-220ENST00000442730 CCDC30Q5VVM6 783 aa28.58■■■□□ 2.17
HDLBP-220ENST00000442730 PHAXQ9H814 394 aaKnown RBP28.58■■■□□ 2.17
HDLBP-220ENST00000442730 KIF3CO14782 793 aa28.57■■■□□ 2.16
HDLBP-220ENST00000442730 CCDC93Q567U6 631 aa28.57■■■□□ 2.16
HDLBP-220ENST00000442730 WDR63Q8IWG1 891 aa28.57■■■□□ 2.16
HDLBP-220ENST00000442730 RPGRQ92834 1020 aaKnown RBP28.57■■■□□ 2.16
HDLBP-220ENST00000442730 CHMP4AQ9BY43 222 aa28.57■■■□□ 2.16
HDLBP-220ENST00000442730 OLFM4Q6UX06 510 aa28.56■■■□□ 2.16
HDLBP-220ENST00000442730 ISCA1Q9BUE6 129 aa28.56■■■□□ 2.16
HDLBP-220ENST00000442730 SNED1Q8TER0 1413 aa28.55■■■□□ 2.16
HDLBP-220ENST00000442730 GOLGA2Q08379 1002 aa28.55■■■□□ 2.16
HDLBP-220ENST00000442730 NMRK2Q9NPI5 230 aa28.55■■■□□ 2.16
HDLBP-220ENST00000442730 TRMT112Q9UI30 125 aaKnown RBP28.55■■■□□ 2.16
HDLBP-220ENST00000442730 SH3TC1Q8TE82 1336 aa28.54■■■□□ 2.16
HDLBP-220ENST00000442730 TWISTNBQ3B726 338 aaPredicted RBP28.54■■■□□ 2.16
HDLBP-220ENST00000442730 CCDC88AQ3V6T2 1871 aa28.53■■■□□ 2.16
HDLBP-220ENST00000442730 LAMB2P55268 1798 aa28.53■■■□□ 2.16
HDLBP-220ENST00000442730 KDM2BQ8NHM5 1336 aa28.53■■■□□ 2.16
HDLBP-220ENST00000442730 SYNE4Q8N205 404 aa28.53■■■□□ 2.16
HDLBP-220ENST00000442730 NLRP3Q96P20 1036 aa28.53■■■□□ 2.16
HDLBP-220ENST00000442730 CRAMP1Q96RY5 1269 aa28.53■■■□□ 2.16
HDLBP-220ENST00000442730 ATP5J2-PTCD1G3V325 749 aa28.52■■■□□ 2.16
HDLBP-220ENST00000442730 HCLS1P14317 486 aaPredicted RBP28.52■■■□□ 2.16
HDLBP-220ENST00000442730 RIC3Q7Z5B4 369 aa28.52■■■□□ 2.16
HDLBP-220ENST00000442730 ZNF428Q96B54 188 aa28.52■■■□□ 2.16
HDLBP-220ENST00000442730 RBM17Q96I25 401 aaKnown RBP28.52■■■□□ 2.16
HDLBP-220ENST00000442730 DICER1Q9UPY3 1922 aaKnown RBP28.51■■■□□ 2.15
HDLBP-220ENST00000442730 DDX60Q8IY21 1712 aaKnown RBP28.5■■■□□ 2.15
HDLBP-220ENST00000442730 TRIM28Q13263 835 aaKnown RBP28.5■■■□□ 2.15
HDLBP-220ENST00000442730 SPINK5Q9NQ38 1064 aaPredicted RBP28.5■■■□□ 2.15
HDLBP-220ENST00000442730 FKBP4Q02790 459 aaKnown RBP eCLIP28.49■■■□□ 2.15
HDLBP-220ENST00000442730 RTKN2Q8IZC4 609 aa28.49■■■□□ 2.15
HDLBP-220ENST00000442730 STK31Q9BXU1 1019 aa28.49■■■□□ 2.15
HDLBP-220ENST00000442730 TCERG1O14776 1098 aaKnown RBP28.48■■■□□ 2.15
HDLBP-220ENST00000442730 ABCC4O15439 1325 aa28.47■■■□□ 2.15
HDLBP-220ENST00000442730 PPEF1O14829 653 aaPredicted RBP28.47■■■□□ 2.15
HDLBP-220ENST00000442730 DDX58O95786 925 aaKnown RBP28.47■■■□□ 2.15
HDLBP-220ENST00000442730 SLC51AQ86UW1 340 aa28.47■■■□□ 2.15
HDLBP-220ENST00000442730 ZNF521Q96K83 1311 aa28.46■■■□□ 2.15
HDLBP-220ENST00000442730 GLTPD2A6NH11 291 aa28.46■■■□□ 2.15
HDLBP-220ENST00000442730 FAM89AQ96GI7 184 aa28.46■■■□□ 2.15
HDLBP-220ENST00000442730 MYD88Q99836 296 aa28.46■■■□□ 2.15
HDLBP-220ENST00000442730 EXOSC9Q06265 439 aaKnown RBP28.45■■■□□ 2.14
HDLBP-220ENST00000442730 CC2D2BQ6DHV5 1058 aa28.45■■■□□ 2.14
HDLBP-220ENST00000442730 ZNF277Q9NRM2 450 aaPredicted RBP28.45■■■□□ 2.14
HDLBP-220ENST00000442730 PSMD1Q99460 953 aa28.44■■■□□ 2.14
HDLBP-220ENST00000442730 METTL22Q9BUU2 404 aaPredicted RBP28.44■■■□□ 2.14
HDLBP-220ENST00000442730 MYH16Q9H6N6 1097 aa28.44■■■□□ 2.14
HDLBP-220ENST00000442730 G2E3Q7L622 706 aa28.43■■■□□ 2.14
HDLBP-220ENST00000442730 MAP3K2Q9Y2U5 619 aa28.43■■■□□ 2.14
HDLBP-220ENST00000442730 VAMP4O75379 141 aa28.42■■■□□ 2.14
HDLBP-220ENST00000442730 SLC4A2P04920 1241 aa28.42■■■□□ 2.14
HDLBP-220ENST00000442730 KSR2Q6VAB6 950 aa28.42■■■□□ 2.14
HDLBP-220ENST00000442730 RRAGCQ9HB90 399 aa28.42■■■□□ 2.14
HDLBP-220ENST00000442730 PI4KAP2A4QPH2 592 aa28.41■■■□□ 2.14
HDLBP-220ENST00000442730 TOMM70O94826 608 aa28.41■■■□□ 2.14
HDLBP-220ENST00000442730 RTL5Q5HYW3 569 aaPredicted RBP28.41■■■□□ 2.14
HDLBP-220ENST00000442730 PI4KAP1Q8N8J0 262 aa28.41■■■□□ 2.14
HDLBP-220ENST00000442730 ZBTB38Q8NAP3 1195 aaPredicted RBP28.41■■■□□ 2.14
HDLBP-220ENST00000442730 CCDC191Q8NCU4 936 aa28.41■■■□□ 2.14
HDLBP-220ENST00000442730 WDR90Q96KV7 1748 aa28.4■■■□□ 2.14
HDLBP-220ENST00000442730 CCER2I3L3R5 266 aa28.4■■■□□ 2.14
HDLBP-220ENST00000442730 GRIPAP1Q4V328 841 aa28.4■■■□□ 2.14
HDLBP-220ENST00000442730 DDX46Q7L014 1031 aaKnown RBP28.4■■■□□ 2.14
HDLBP-220ENST00000442730 ATP6V0A2Q9Y487 856 aa28.4■■■□□ 2.14
HDLBP-220ENST00000442730 IRS4O14654 1257 aaPredicted RBP28.39■■■□□ 2.14
HDLBP-220ENST00000442730 IARSP41252 1262 aaKnown RBP28.39■■■□□ 2.14
HDLBP-220ENST00000442730 CWC25Q9NXE8 425 aaPredicted RBP28.39■■■□□ 2.14
HDLBP-220ENST00000442730 GRAPQ13588 217 aa28.38■■■□□ 2.13
HDLBP-220ENST00000442730 SF3B3Q15393 1217 aaKnown RBP28.38■■■□□ 2.13
HDLBP-220ENST00000442730 DPY19L2Q6NUT2 758 aa28.38■■■□□ 2.13
HDLBP-220ENST00000442730 GRAPLQ8TC17 118 aaPredicted RBP28.38■■■□□ 2.13
HDLBP-220ENST00000442730 COL4A5P29400 1685 aa28.38■■■□□ 2.13
HDLBP-220ENST00000442730 BBOX1O75936 387 aa28.37■■■□□ 2.13
HDLBP-220ENST00000442730 FLIIQ13045 1269 aa28.37■■■□□ 2.13
HDLBP-220ENST00000442730 COL4A1P02462 1669 aa28.37■■■□□ 2.13
HDLBP-220ENST00000442730 LRRC37AA6NMS7 1700 aa28.36■■■□□ 2.13
HDLBP-220ENST00000442730 PCCAP05165 728 aaPredicted RBP28.36■■■□□ 2.13
HDLBP-220ENST00000442730 IGKV5-2P06315 115 aa28.36■■■□□ 2.13
HDLBP-220ENST00000442730 C16orf71Q8IYS4 520 aaPredicted RBP28.36■■■□□ 2.13
HDLBP-220ENST00000442730 RBM46Q8TBY0 533 aaKnown RBP28.36■■■□□ 2.13
HDLBP-220ENST00000442730 ZNF541Q9H0D2 1346 aa28.35■■■□□ 2.13
HDLBP-220ENST00000442730 TAF1P21675 1872 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms