RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CWC25Q9NXE8 425 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPA-208ENST00000442054 COL15A1P39059 1388 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 SH3TC1Q8TE82 1336 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 SLIT3O75094 1523 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 PI4KAP2A4QPH2 592 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 ALDH1L2Q3SY69 923 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 PI4KAP1Q8N8J0 262 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 ZC3H12CQ9C0D7 883 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 CNTNAP4Q9C0A0 1308 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 GYS1P13807 737 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 ERFEQ4G0M1 354 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 SOGA3Q5TF21 947 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 ATF7IPQ6VMQ6 1270 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 DZIP1LQ8IYY4 767 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 CDC5LQ99459 802 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 MAP3K2Q9Y2U5 619 aa9.11□□□□□ -0.95
CDC42BPA-208ENST00000442054 FAM208AQ9UK61 1670 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 RBM25P49756 843 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 NUCB1Q02818 461 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 ZKSCAN2Q63HK3 967 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 SIRT2Q8IXJ6 389 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 FAM89AQ96GI7 184 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 SRCIN1Q9C0H9 1055 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 ABCC4O15439 1325 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 APBB1O00213 710 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 DISP2A7MBM2 1401 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 RIMBP2O15034 1052 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 RBM5P52756 815 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 CCDC152Q4G0S7 254 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 TBC1D9BQ66K14 1250 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 ITPRIPQ8IWB1 547 aa9.1□□□□□ -0.95
CDC42BPA-208ENST00000442054 BCL9O00512 1426 aa9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 IRS4O14654 1257 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 RBM26Q5T8P6 1007 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 UBE3BQ7Z3V4 1068 aa9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 API5Q9BZZ5 524 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 GLI3P10071 1580 aa9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 ATP10DQ9P241 1426 aa9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 ZBTB7BO15156 539 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 DPP8Q6V1X1 898 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 TMEM57Q8N5G2 664 aa9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 AKT1S1Q96B36 256 aa9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 TAOK3Q9H2K8 898 aa9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 CHMP4BQ9H444 224 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 USP42Q9H9J4 1324 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-208ENST00000442054 PPIP5K2O43314 1243 aa9.09□□□□□ -0.96
CDC42BPA-208ENST00000442054 TGFB2P61812 414 aa9.09□□□□□ -0.96
CDC42BPA-208ENST00000442054 ANKRD18AQ8IVF6 992 aa9.09□□□□□ -0.96
CDC42BPA-208ENST00000442054 NIM1KQ8IY84 436 aa9.09□□□□□ -0.96
CDC42BPA-208ENST00000442054 BABAM1Q9NWV8 329 aa9.09□□□□□ -0.96
CDC42BPA-208ENST00000442054 NOB1Q9ULX3 412 aaKnown RBP9.09□□□□□ -0.96
CDC42BPA-208ENST00000442054 CCDC93Q567U6 631 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 CLEC4GQ6UXB4 293 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 NLGN2Q8NFZ4 835 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 DNAAF4Q8WXU2 420 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 MASTLQ96GX5 879 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 MAP3K15Q6ZN16 1313 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 VAMP4O75379 141 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 TTLL12Q14166 644 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 MRPL50Q8N5N7 158 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 RWDD1Q9H446 243 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 CRYBG1Q9Y4K1 1723 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 UBTFL1P0CB47 393 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 EIF5P55010 431 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 FLIIQ13045 1269 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 IFIT5Q13325 482 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 C8orf58Q8NAV2 365 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 BRIP1Q9BX63 1249 aa9.08□□□□□ -0.96
CDC42BPA-208ENST00000442054 PIK3C2AO00443 1686 aa9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 F6X3S4 739 aa9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 CHL1O00533 1208 aa9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 PLBD2Q8NHP8 589 aa9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 ARHGAP45Q92619 1136 aa9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 EYA3Q99504 573 aa9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 ZNF408Q9H9D4 720 aa9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 GIGYF2Q6Y7W6 1299 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 NPR1P16066 1061 aa9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 TCIRG1Q13488 830 aa9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 MPNDQ8N594 471 aa9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 PHAXQ9H814 394 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-208ENST00000442054 NFAT5O94916 1531 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 KDRP35968 1356 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 ANKRD18BA2A2Z9 1011 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 C9orf131Q5VYM1 1079 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 SUPT20HQ8NEM7 779 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 DDX19BQ9UMR2 479 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 SOS1Q07889 1333 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 ERBB4Q15303 1308 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 INTS5Q6P9B9 1019 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 KSR2Q6VAB6 950 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 SNX21Q969T3 373 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 CARMIL3Q8ND23 1372 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 HLFQ16534 295 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 OGFOD1Q8N543 542 aa9.06□□□□□ -0.96
CDC42BPA-208ENST00000442054 NCAPD2Q15021 1401 aa9.05□□□□□ -0.96
CDC42BPA-208ENST00000442054 NEUROD6Q96NK8 337 aa9.05□□□□□ -0.96
CDC42BPA-208ENST00000442054 HOXB7P09629 217 aa9.05□□□□□ -0.96
CDC42BPA-208ENST00000442054 BEGAINQ9BUH8 593 aa9.05□□□□□ -0.96
CDC42BPA-208ENST00000442054 ERVV-1B6SEH8 477 aa9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 PRR5LQ6MZQ0 368 aa9.04□□□□□ -0.96
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