RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PLA2G4DQ86XP0 818 aa24.04■■□□□ 1.44
SHOX2-203ENST00000441443 CEP170BQ9Y4F5 1589 aaPredicted RBP24.04■■□□□ 1.44
SHOX2-203ENST00000441443 GOLGA6L4A6NEF3 574 aa24.04■■□□□ 1.44
SHOX2-203ENST00000441443 DNAJC25Q9H1X3 360 aa24.04■■□□□ 1.44
SHOX2-203ENST00000441443 CYP46A1Q9Y6A2 500 aa24.03■■□□□ 1.44
SHOX2-203ENST00000441443 MORC2Q9Y6X9 1032 aaPredicted RBP24.03■■□□□ 1.44
SHOX2-203ENST00000441443 COL9A3Q14050 684 aaPredicted RBP24.03■■□□□ 1.44
SHOX2-203ENST00000441443 ARID5BQ14865 1188 aa24.03■■□□□ 1.44
SHOX2-203ENST00000441443 VPS53Q5VIR6 699 aa24.03■■□□□ 1.44
SHOX2-203ENST00000441443 CEP135Q66GS9 1140 aa24.03■■□□□ 1.44
SHOX2-203ENST00000441443 SSH3Q8TE77 659 aa24.03■■□□□ 1.44
SHOX2-203ENST00000441443 TMEM51Q9NW97 253 aa24.03■■□□□ 1.44
SHOX2-203ENST00000441443 EIF2S2P20042 333 aaKnown RBP24.02■■□□□ 1.44
SHOX2-203ENST00000441443 TAF3Q5VWG9 929 aa24.02■■□□□ 1.44
SHOX2-203ENST00000441443 USP27XA6NNY8 438 aa24.02■■□□□ 1.44
SHOX2-203ENST00000441443 ANKLE2Q86XL3 938 aa24.02■■□□□ 1.44
SHOX2-203ENST00000441443 KLHL34Q8N239 644 aa24.02■■□□□ 1.44
SHOX2-203ENST00000441443 IL17REQ8NFR9 667 aa24.02■■□□□ 1.44
SHOX2-203ENST00000441443 ZNF165P49910 485 aa24.02■■□□□ 1.44
SHOX2-203ENST00000441443 CCDC30Q5VVM6 783 aa24.02■■□□□ 1.44
SHOX2-203ENST00000441443 TPCN1Q9ULQ1 816 aa24.02■■□□□ 1.44
SHOX2-203ENST00000441443 NRKQ7Z2Y5 1582 aa24.01■■□□□ 1.43
SHOX2-203ENST00000441443 SH2B1Q9NRF2 756 aaPredicted RBP24.01■■□□□ 1.43
SHOX2-203ENST00000441443 SRGAP3O43295 1099 aa24.01■■□□□ 1.43
SHOX2-203ENST00000441443 KMT5BQ4FZB7 885 aa24.01■■□□□ 1.43
SHOX2-203ENST00000441443 ZSCAN31Q96LW9 406 aaPredicted RBP24.01■■□□□ 1.43
SHOX2-203ENST00000441443 ZNF215Q9UL58 517 aaPredicted RBP24.01■■□□□ 1.43
SHOX2-203ENST00000441443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24■■□□□ 1.43
SHOX2-203ENST00000441443 TCEANC2Q96MN5 208 aa24■■□□□ 1.43
SHOX2-203ENST00000441443 TERF2Q15554 542 aa24■■□□□ 1.43
SHOX2-203ENST00000441443 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
SHOX2-203ENST00000441443 SPATA32Q96LK8 384 aa24■■□□□ 1.43
SHOX2-203ENST00000441443 ZSWIM6Q9HCJ5 1215 aa24■■□□□ 1.43
SHOX2-203ENST00000441443 TOPAZ1Q8N9V7 1692 aa23.99■■□□□ 1.43
SHOX2-203ENST00000441443 RAB11FIP3O75154 756 aa23.99■■□□□ 1.43
SHOX2-203ENST00000441443 NR1I2O75469 434 aa23.99■■□□□ 1.43
SHOX2-203ENST00000441443 LRRC59Q96AG4 307 aaKnown RBP23.99■■□□□ 1.43
SHOX2-203ENST00000441443 SLIT1O75093 1534 aa23.99■■□□□ 1.43
SHOX2-203ENST00000441443 TDRD7Q8NHU6 1098 aaKnown RBP23.99■■□□□ 1.43
SHOX2-203ENST00000441443 KRT222Q8N1A0 295 aa23.98■■□□□ 1.43
SHOX2-203ENST00000441443 KIF1BPQ96EK5 621 aa23.98■■□□□ 1.43
SHOX2-203ENST00000441443 NPHP1O15259 732 aa23.97■■□□□ 1.43
SHOX2-203ENST00000441443 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.97■■□□□ 1.43
SHOX2-203ENST00000441443 PHAXQ9H814 394 aaKnown RBP23.97■■□□□ 1.43
SHOX2-203ENST00000441443 ST7Q9NRC1 585 aa23.97■■□□□ 1.43
SHOX2-203ENST00000441443 FER1L4A9Z1Z3 1794 aa23.97■■□□□ 1.43
SHOX2-203ENST00000441443 ERICH4A6NGS2 130 aa23.97■■□□□ 1.43
SHOX2-203ENST00000441443 BICD2Q8TD16 824 aa23.97■■□□□ 1.43
SHOX2-203ENST00000441443 TRMT1Q9NXH9 659 aaKnown RBP23.97■■□□□ 1.43
SHOX2-203ENST00000441443 ELP1O95163 1332 aa23.96■■□□□ 1.43
SHOX2-203ENST00000441443 KCNJ4P48050 445 aa23.96■■□□□ 1.43
SHOX2-203ENST00000441443 CLSTN2Q9H4D0 955 aa23.96■■□□□ 1.43
SHOX2-203ENST00000441443 KDRP35968 1356 aa23.96■■□□□ 1.43
SHOX2-203ENST00000441443 NBPF6Q5VWK0 638 aa23.96■■□□□ 1.43
SHOX2-203ENST00000441443 ZNF397Q8NF99 534 aaPredicted RBP23.96■■□□□ 1.43
SHOX2-203ENST00000441443 NBPF4Q96M43 638 aa23.96■■□□□ 1.43
SHOX2-203ENST00000441443 ORAI2Q96SN7 254 aa23.96■■□□□ 1.43
SHOX2-203ENST00000441443 LRRC8AQ8IWT6 810 aa23.95■■□□□ 1.43
SHOX2-203ENST00000441443 LEO1Q8WVC0 666 aaPredicted RBP23.95■■□□□ 1.43
SHOX2-203ENST00000441443 DDX19AQ9NUU7 478 aaKnown RBP23.95■■□□□ 1.43
SHOX2-203ENST00000441443 ELF2Q15723 593 aa23.95■■□□□ 1.42
SHOX2-203ENST00000441443 VGLL3A8MV65 326 aa23.94■■□□□ 1.42
SHOX2-203ENST00000441443 ANXA1P04083 346 aa23.94■■□□□ 1.42
SHOX2-203ENST00000441443 NBPF7P0C2Y1 421 aaPredicted RBP23.94■■□□□ 1.42
SHOX2-203ENST00000441443 OS9Q13438 667 aaPredicted RBP23.94■■□□□ 1.42
SHOX2-203ENST00000441443 FBXO38Q6PIJ6 1188 aa23.94■■□□□ 1.42
SHOX2-203ENST00000441443 LARP1Q6PKG0 1096 aaKnown RBP23.94■■□□□ 1.42
SHOX2-203ENST00000441443 LGR6Q9HBX8 967 aa23.94■■□□□ 1.42
SHOX2-203ENST00000441443 STK3Q13188 491 aa23.94■■□□□ 1.42
SHOX2-203ENST00000441443 POLA2Q14181 598 aa23.94■■□□□ 1.42
SHOX2-203ENST00000441443 TAF7Q15545 349 aaPredicted RBP23.94■■□□□ 1.42
SHOX2-203ENST00000441443 PTPN14Q15678 1187 aa23.94■■□□□ 1.42
SHOX2-203ENST00000441443 HDGFL1Q5TGJ6 251 aa23.94■■□□□ 1.42
SHOX2-203ENST00000441443 SCAND2PQ9GZW5 306 aaPredicted RBP23.94■■□□□ 1.42
SHOX2-203ENST00000441443 NPHP3Q7Z494 1330 aa23.93■■□□□ 1.42
SHOX2-203ENST00000441443 ZKSCAN1P17029 563 aaPredicted RBP23.93■■□□□ 1.42
SHOX2-203ENST00000441443 RUFY2Q8WXA3 655 aa23.93■■□□□ 1.42
SHOX2-203ENST00000441443 PGBD1Q96JS3 809 aa23.93■■□□□ 1.42
SHOX2-203ENST00000441443 SKILP12757 684 aa23.92■■□□□ 1.42
SHOX2-203ENST00000441443 NECTIN1Q15223 517 aa23.92■■□□□ 1.42
SHOX2-203ENST00000441443 FILIP1Q7Z7B0 1213 aa23.92■■□□□ 1.42
SHOX2-203ENST00000441443 TM6SF1Q9BZW5 370 aa23.92■■□□□ 1.42
SHOX2-203ENST00000441443 PIK3C2AO00443 1686 aa23.92■■□□□ 1.42
SHOX2-203ENST00000441443 RBM43Q6ZSC3 357 aaKnown RBP23.92■■□□□ 1.42
SHOX2-203ENST00000441443 RBM8AQ9Y5S9 174 aaKnown RBP23.92■■□□□ 1.42
SHOX2-203ENST00000441443 USP16Q9Y5T5 823 aa23.92■■□□□ 1.42
SHOX2-203ENST00000441443 RBM6P78332 1123 aaKnown RBP23.92■■□□□ 1.42
SHOX2-203ENST00000441443 MPRIPQ6WCQ1 1025 aa23.92■■□□□ 1.42
SHOX2-203ENST00000441443 MAP3K5Q99683 1374 aa23.91■■□□□ 1.42
SHOX2-203ENST00000441443 A0A087WWV3 80 aa23.91■■□□□ 1.42
SHOX2-203ENST00000441443 GOLGA6L19H0YKK7 550 aa23.91■■□□□ 1.42
SHOX2-203ENST00000441443 GLRX3O76003 335 aaKnown RBP23.91■■□□□ 1.42
SHOX2-203ENST00000441443 CREB3L3Q68CJ9 461 aa23.91■■□□□ 1.42
SHOX2-203ENST00000441443 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
SHOX2-203ENST00000441443 KCNQ3O43525 872 aa23.9■■□□□ 1.42
SHOX2-203ENST00000441443 PDCP20941 246 aa23.9■■□□□ 1.42
SHOX2-203ENST00000441443 C11orf57Q6ZUT1 292 aaPredicted RBP23.9■■□□□ 1.42
SHOX2-203ENST00000441443 NALCNQ8IZF0 1738 aa23.89■■□□□ 1.42
SHOX2-203ENST00000441443 FAM227BQ96M60 508 aa23.89■■□□□ 1.42
SHOX2-203ENST00000441443 CCDC171Q6TFL3 1326 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms