RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
LINC01271-201ENST00000441214 MED4Q9NPJ6 270 aa16.59■□□□□ 0.25
LINC01271-201ENST00000441214 SPATA31A1Q5TZJ5 1347 aa16.59■□□□□ 0.25
LINC01271-201ENST00000441214 KDM6AO15550 1401 aaPredicted RBP16.59■□□□□ 0.25
LINC01271-201ENST00000441214 CHL1O00533 1208 aa16.59■□□□□ 0.25
LINC01271-201ENST00000441214 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
LINC01271-201ENST00000441214 TNNQ9UQP3 1299 aa16.59■□□□□ 0.25
LINC01271-201ENST00000441214 HMGB1P09429 215 aaKnown RBP16.58■□□□□ 0.25
LINC01271-201ENST00000441214 GOLGA6L1Q8N7Z2 621 aa16.58■□□□□ 0.25
LINC01271-201ENST00000441214 NFATC2IPQ8NCF5 419 aa16.58■□□□□ 0.25
LINC01271-201ENST00000441214 AFF2P51816 1311 aa16.58■□□□□ 0.25
LINC01271-201ENST00000441214 PARP4Q9UKK3 1724 aaKnown RBP16.58■□□□□ 0.25
LINC01271-201ENST00000441214 RARSP54136 660 aaKnown RBP16.58■□□□□ 0.24
LINC01271-201ENST00000441214 PDE3AQ14432 1141 aa16.58■□□□□ 0.24
LINC01271-201ENST00000441214 TAF7Q15545 349 aaPredicted RBP16.57■□□□□ 0.24
LINC01271-201ENST00000441214 TWISTNBQ3B726 338 aaPredicted RBP16.57■□□□□ 0.24
LINC01271-201ENST00000441214 PKD1L3Q7Z443 1732 aa16.57■□□□□ 0.24
LINC01271-201ENST00000441214 CEMIPQ8WUJ3 1361 aa16.57■□□□□ 0.24
LINC01271-201ENST00000441214 SPATA31A5Q5VU36 1347 aa16.57■□□□□ 0.24
LINC01271-201ENST00000441214 SPATA31A7Q8IWB4 1347 aa16.57■□□□□ 0.24
LINC01271-201ENST00000441214 BTBD11A6QL63 1104 aa16.57■□□□□ 0.24
LINC01271-201ENST00000441214 TRERF1Q96PN7 1200 aa16.57■□□□□ 0.24
LINC01271-201ENST00000441214 SH3BP1Q9Y3L3 701 aa16.57■□□□□ 0.24
LINC01271-201ENST00000441214 PCDH11XQ9BZA7 1347 aa16.56■□□□□ 0.24
LINC01271-201ENST00000441214 PCDH11YQ9BZA8 1340 aa16.56■□□□□ 0.24
LINC01271-201ENST00000441214 HTATSF1O43719 755 aaKnown RBP16.56■□□□□ 0.24
LINC01271-201ENST00000441214 FAM182BQ5T319 152 aa16.56■□□□□ 0.24
LINC01271-201ENST00000441214 SSH1Q8WYL5 1049 aa16.56■□□□□ 0.24
LINC01271-201ENST00000441214 CLUAP1Q96AJ1 413 aa16.56■□□□□ 0.24
LINC01271-201ENST00000441214 SHANK3Q9BYB0 1731 aa16.56■□□□□ 0.24
LINC01271-201ENST00000441214 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
LINC01271-201ENST00000441214 NBPF11Q86T75 865 aa16.56■□□□□ 0.24
LINC01271-201ENST00000441214 IRF6O14896 467 aa16.55■□□□□ 0.24
LINC01271-201ENST00000441214 SETQ01105 290 aaPredicted RBP16.55■□□□□ 0.24
LINC01271-201ENST00000441214 UVSSAQ2YD98 709 aa16.55■□□□□ 0.24
LINC01271-201ENST00000441214 CCDC91Q7Z6B0 441 aa16.55■□□□□ 0.24
LINC01271-201ENST00000441214 NWD2Q9ULI1 1742 aa16.54■□□□□ 0.24
LINC01271-201ENST00000441214 PRAMEF22A3QJZ6 481 aa16.54■□□□□ 0.24
LINC01271-201ENST00000441214 VAMP4O75379 141 aa16.54■□□□□ 0.24
LINC01271-201ENST00000441214 FNBP4Q8N3X1 1017 aaPredicted RBP16.54■□□□□ 0.24
LINC01271-201ENST00000441214 LMBRD1Q9NUN5 540 aa16.54■□□□□ 0.24
LINC01271-201ENST00000441214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC01271-201ENST00000441214 EXOC5O00471 708 aa16.54■□□□□ 0.24
LINC01271-201ENST00000441214 TPM3P06753 285 aa16.54■□□□□ 0.24
LINC01271-201ENST00000441214 SYTL4Q96C24 671 aaPredicted RBP16.54■□□□□ 0.24
LINC01271-201ENST00000441214 JRKLQ9Y4A0 524 aa16.54■□□□□ 0.24
LINC01271-201ENST00000441214 CALRP27797 417 aaKnown RBP16.53■□□□□ 0.24
LINC01271-201ENST00000441214 TDO2P48775 406 aa16.53■□□□□ 0.24
LINC01271-201ENST00000441214 TXLNBQ8N3L3 684 aa16.53■□□□□ 0.24
LINC01271-201ENST00000441214 DISP2A7MBM2 1401 aa16.53■□□□□ 0.24
LINC01271-201ENST00000441214 SSFA2P28290 1259 aa16.53■□□□□ 0.24
LINC01271-201ENST00000441214 NBPF9Q3BBW0 867 aa16.53■□□□□ 0.24
LINC01271-201ENST00000441214 GPATCH11Q8N954 259 aa16.53■□□□□ 0.24
LINC01271-201ENST00000441214 DCAF5Q96JK2 942 aa16.53■□□□□ 0.24
LINC01271-201ENST00000441214 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
LINC01271-201ENST00000441214 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.53■□□□□ 0.24
LINC01271-201ENST00000441214 SCN11AQ9UI33 1791 aa16.53■□□□□ 0.24
LINC01271-201ENST00000441214 GSCP56915 257 aaPredicted RBP16.52■□□□□ 0.24
LINC01271-201ENST00000441214 CABP4P57796 275 aa16.52■□□□□ 0.24
LINC01271-201ENST00000441214 DDB1Q16531 1140 aa16.52■□□□□ 0.24
LINC01271-201ENST00000441214 ZNF397Q8NF99 534 aaPredicted RBP16.52■□□□□ 0.24
LINC01271-201ENST00000441214 RNF217Q8TC41 542 aa16.52■□□□□ 0.24
LINC01271-201ENST00000441214 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
LINC01271-201ENST00000441214 BSDC1Q9NW68 430 aaPredicted RBP16.52■□□□□ 0.24
LINC01271-201ENST00000441214 FBXO41Q8TF61 875 aa16.52■□□□□ 0.23
LINC01271-201ENST00000441214 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.23
LINC01271-201ENST00000441214 ACSBG1Q96GR2 724 aa16.52■□□□□ 0.23
LINC01271-201ENST00000441214 CXorf56Q9H5V9 222 aa16.52■□□□□ 0.23
LINC01271-201ENST00000441214 TTC36A6NLP5 189 aa16.51■□□□□ 0.23
LINC01271-201ENST00000441214 MYO1CO00159 1063 aa16.51■□□□□ 0.23
LINC01271-201ENST00000441214 EIF2S2P20042 333 aaKnown RBP16.51■□□□□ 0.23
LINC01271-201ENST00000441214 NUCB2P80303 420 aa16.51■□□□□ 0.23
LINC01271-201ENST00000441214 VPS72Q15906 364 aa16.51■□□□□ 0.23
LINC01271-201ENST00000441214 PANK1Q8TE04 598 aa16.51■□□□□ 0.23
LINC01271-201ENST00000441214 CWC15Q9P013 229 aaKnown RBP16.51■□□□□ 0.23
LINC01271-201ENST00000441214 A0A1B0GUL7 405 aa16.5■□□□□ 0.23
LINC01271-201ENST00000441214 DEF6Q9H4E7 631 aa16.5■□□□□ 0.23
LINC01271-201ENST00000441214 SMTNL1A8MU46 457 aa16.5■□□□□ 0.23
LINC01271-201ENST00000441214 SSR1P43307 286 aaKnown RBP16.5■□□□□ 0.23
LINC01271-201ENST00000441214 SEMA3FQ13275 785 aa16.5■□□□□ 0.23
LINC01271-201ENST00000441214 FAM184AQ8NB25 1140 aa16.5■□□□□ 0.23
LINC01271-201ENST00000441214 ZNF592Q92610 1267 aa16.5■□□□□ 0.23
LINC01271-201ENST00000441214 WNK3Q9BYP7 1800 aa16.5■□□□□ 0.23
LINC01271-201ENST00000441214 ATP2B1P20020 1258 aa16.49■□□□□ 0.23
LINC01271-201ENST00000441214 SWT1Q5T5J6 900 aaKnown RBP16.49■□□□□ 0.23
LINC01271-201ENST00000441214 NBPF10Q6P3W6 841 aaKnown RBP16.49■□□□□ 0.23
LINC01271-201ENST00000441214 KIAA1524Q8TCG1 905 aa16.49■□□□□ 0.23
LINC01271-201ENST00000441214 NOB1Q9ULX3 412 aaKnown RBP16.49■□□□□ 0.23
LINC01271-201ENST00000441214 ANXA1P04083 346 aa16.49■□□□□ 0.23
LINC01271-201ENST00000441214 NOM1Q5C9Z4 860 aaKnown RBP16.49■□□□□ 0.23
LINC01271-201ENST00000441214 RPAINQ86UA6 219 aa16.49■□□□□ 0.23
LINC01271-201ENST00000441214 MARCH10Q8NA82 808 aaPredicted RBP16.49■□□□□ 0.23
LINC01271-201ENST00000441214 TMX1Q9H3N1 280 aa16.49■□□□□ 0.23
LINC01271-201ENST00000441214 SUFUQ9UMX1 484 aa16.49■□□□□ 0.23
LINC01271-201ENST00000441214 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
LINC01271-201ENST00000441214 K7ELQ4 463 aaPredicted RBP16.48■□□□□ 0.23
LINC01271-201ENST00000441214 PTCD1O75127 700 aaKnown RBP16.48■□□□□ 0.23
LINC01271-201ENST00000441214 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
LINC01271-201ENST00000441214 TRDNQ13061 729 aa16.48■□□□□ 0.23
LINC01271-201ENST00000441214 MCTP1Q6DN14 999 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms