RNA–Protein interactions for RNA: ENST00000440827.3

PXN-205, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-205ENST00000440827 NMRK2Q9NPI5 230 aa20.78■□□□□ 0.92
PXN-205ENST00000440827 TRMT112Q9UI30 125 aaKnown RBP20.78■□□□□ 0.92
PXN-205ENST00000440827 CACNA1SQ13698 1873 aa20.77■□□□□ 0.92
PXN-205ENST00000440827 ATP5J2-PTCD1G3V325 749 aa20.77■□□□□ 0.92
PXN-205ENST00000440827 TCERG1O14776 1098 aaKnown RBP20.77■□□□□ 0.92
PXN-205ENST00000440827 CCDC30Q5VVM6 783 aa20.77■□□□□ 0.92
PXN-205ENST00000440827 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
PXN-205ENST00000440827 RIC3Q7Z5B4 369 aa20.77■□□□□ 0.92
PXN-205ENST00000440827 NLRP3Q96P20 1036 aa20.77■□□□□ 0.92
PXN-205ENST00000440827 PHAXQ9H814 394 aaKnown RBP20.77■□□□□ 0.92
PXN-205ENST00000440827 GOLGA2Q08379 1002 aa20.76■□□□□ 0.91
PXN-205ENST00000440827 CRY2Q49AN0 593 aa20.76■□□□□ 0.91
PXN-205ENST00000440827 CCDC93Q567U6 631 aa20.76■□□□□ 0.91
PXN-205ENST00000440827 C3orf67Q6ZVT6 689 aa20.76■□□□□ 0.91
PXN-205ENST00000440827 SYNE4Q8N205 404 aa20.76■□□□□ 0.91
PXN-205ENST00000440827 KDM2BQ8NHM5 1336 aa20.76■□□□□ 0.91
PXN-205ENST00000440827 TNRC6CQ9HCJ0 1690 aaKnown RBP20.75■□□□□ 0.91
PXN-205ENST00000440827 KIF3CO14782 793 aa20.75■□□□□ 0.91
PXN-205ENST00000440827 HCLS1P14317 486 aaPredicted RBP20.75■□□□□ 0.91
PXN-205ENST00000440827 C7orf43Q8WVR3 580 aa20.75■□□□□ 0.91
PXN-205ENST00000440827 CHMP4AQ9BY43 222 aa20.75■□□□□ 0.91
PXN-205ENST00000440827 SBF1O95248 1867 aa20.75■□□□□ 0.91
PXN-205ENST00000440827 IL16Q14005 1332 aa20.75■□□□□ 0.91
PXN-205ENST00000440827 TWISTNBQ3B726 338 aaPredicted RBP20.74■□□□□ 0.91
PXN-205ENST00000440827 RBM17Q96I25 401 aaKnown RBP20.74■□□□□ 0.91
PXN-205ENST00000440827 SH3TC1Q8TE82 1336 aa20.74■□□□□ 0.91
PXN-205ENST00000440827 NCBP3Q53F19 620 aaKnown RBP20.73■□□□□ 0.91
PXN-205ENST00000440827 RTL5Q5HYW3 569 aaPredicted RBP20.73■□□□□ 0.91
PXN-205ENST00000440827 SLC10A5Q5PT55 438 aa20.73■□□□□ 0.91
PXN-205ENST00000440827 STK31Q9BXU1 1019 aa20.73■□□□□ 0.91
PXN-205ENST00000440827 RRAGCQ9HB90 399 aa20.73■□□□□ 0.91
PXN-205ENST00000440827 HOXA10P31260 410 aaPredicted RBP20.72■□□□□ 0.91
PXN-205ENST00000440827 WDR63Q8IWG1 891 aa20.72■□□□□ 0.91
PXN-205ENST00000440827 ISCA1Q9BUE6 129 aa20.72■□□□□ 0.91
PXN-205ENST00000440827 RIC1Q4ADV7 1423 aa20.71■□□□□ 0.91
PXN-205ENST00000440827 C16orf71Q8IYS4 520 aaPredicted RBP20.71■□□□□ 0.91
PXN-205ENST00000440827 RTKN2Q8IZC4 609 aa20.71■□□□□ 0.91
PXN-205ENST00000440827 FAM89AQ96GI7 184 aa20.71■□□□□ 0.91
PXN-205ENST00000440827 MYD88Q99836 296 aa20.71■□□□□ 0.91
PXN-205ENST00000440827 RNF123Q5XPI4 1314 aa20.71■□□□□ 0.91
PXN-205ENST00000440827 LTBP3Q9NS15 1303 aa20.71■□□□□ 0.91
PXN-205ENST00000440827 FANCIQ9NVI1 1328 aa20.71■□□□□ 0.91
PXN-205ENST00000440827 DDX58O95786 925 aaKnown RBP20.7■□□□□ 0.9
PXN-205ENST00000440827 FKBP4Q02790 459 aaKnown RBP eCLIP20.7■□□□□ 0.9
PXN-205ENST00000440827 CRAMP1Q96RY5 1269 aa20.7■□□□□ 0.9
PXN-205ENST00000440827 ZNF277Q9NRM2 450 aaPredicted RBP20.7■□□□□ 0.9
PXN-205ENST00000440827 CCDC88AQ3V6T2 1871 aa20.7■□□□□ 0.9
PXN-205ENST00000440827 ZC3H4Q9UPT8 1303 aaKnown RBP20.7■□□□□ 0.9
PXN-205ENST00000440827 ANKRD36CQ5JPF3 1778 aa20.69■□□□□ 0.9
PXN-205ENST00000440827 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
PXN-205ENST00000440827 FER1L6Q2WGJ9 1857 aa20.69■□□□□ 0.9
PXN-205ENST00000440827 GLTPD2A6NH11 291 aa20.69■□□□□ 0.9
PXN-205ENST00000440827 PPEF1O14829 653 aaPredicted RBP20.69■□□□□ 0.9
PXN-205ENST00000440827 DPY19L2Q6NUT2 758 aa20.69■□□□□ 0.9
PXN-205ENST00000440827 EXOSC9Q06265 439 aaKnown RBP20.68■□□□□ 0.9
PXN-205ENST00000440827 TMX4Q9H1E5 349 aaPredicted RBP20.68■□□□□ 0.9
PXN-205ENST00000440827 TOMM70O94826 608 aa20.67■□□□□ 0.9
PXN-205ENST00000440827 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
PXN-205ENST00000440827 SLC51AQ86UW1 340 aa20.67■□□□□ 0.9
PXN-205ENST00000440827 SPINK5Q9NQ38 1064 aaPredicted RBP20.67■□□□□ 0.9
PXN-205ENST00000440827 MAP3K2Q9Y2U5 619 aa20.67■□□□□ 0.9
PXN-205ENST00000440827 CC2D2BQ6DHV5 1058 aa20.66■□□□□ 0.9
PXN-205ENST00000440827 DDX46Q7L014 1031 aaKnown RBP20.66■□□□□ 0.9
PXN-205ENST00000440827 ABCC4O15439 1325 aa20.66■□□□□ 0.9
PXN-205ENST00000440827 PI4KAP2A4QPH2 592 aa20.65■□□□□ 0.9
PXN-205ENST00000440827 TRIM28Q13263 835 aaKnown RBP20.65■□□□□ 0.9
PXN-205ENST00000440827 G2E3Q7L622 706 aa20.65■□□□□ 0.9
PXN-205ENST00000440827 PI4KAP1Q8N8J0 262 aa20.65■□□□□ 0.9
PXN-205ENST00000440827 JARID2Q92833 1246 aaPredicted RBP20.65■□□□□ 0.9
PXN-205ENST00000440827 METTL22Q9BUU2 404 aaPredicted RBP20.65■□□□□ 0.9
PXN-205ENST00000440827 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
PXN-205ENST00000440827 TIAM2Q8IVF5 1701 aa20.64■□□□□ 0.9
PXN-205ENST00000440827 IRS4O14654 1257 aaPredicted RBP20.64■□□□□ 0.89
PXN-205ENST00000440827 IARSP41252 1262 aaKnown RBP20.64■□□□□ 0.89
PXN-205ENST00000440827 KSR2Q6VAB6 950 aa20.64■□□□□ 0.89
PXN-205ENST00000440827 DDNO94850 711 aaPredicted RBP20.63■□□□□ 0.89
PXN-205ENST00000440827 VEGFAP15692 232 aaPredicted RBP20.63■□□□□ 0.89
PXN-205ENST00000440827 CCDC191Q8NCU4 936 aa20.63■□□□□ 0.89
PXN-205ENST00000440827 CWC25Q9NXE8 425 aaPredicted RBP20.63■□□□□ 0.89
PXN-205ENST00000440827 VAMP4O75379 141 aa20.62■□□□□ 0.89
PXN-205ENST00000440827 BBOX1O75936 387 aa20.62■□□□□ 0.89
PXN-205ENST00000440827 ZBTB38Q8NAP3 1195 aaPredicted RBP20.62■□□□□ 0.89
PXN-205ENST00000440827 PSMD1Q99460 953 aa20.62■□□□□ 0.89
PXN-205ENST00000440827 ATP6V0A2Q9Y487 856 aa20.62■□□□□ 0.89
PXN-205ENST00000440827 NEXNQ0ZGT2 675 aa20.61■□□□□ 0.89
PXN-205ENST00000440827 GRAPQ13588 217 aa20.61■□□□□ 0.89
PXN-205ENST00000440827 GRAPLQ8TC17 118 aaPredicted RBP20.61■□□□□ 0.89
PXN-205ENST00000440827 HSPA6P17066 643 aa20.6■□□□□ 0.89
PXN-205ENST00000440827 FKBP5Q13451 457 aaPredicted RBP20.6■□□□□ 0.89
PXN-205ENST00000440827 GRIPAP1Q4V328 841 aa20.6■□□□□ 0.89
PXN-205ENST00000440827 RBM46Q8TBY0 533 aaKnown RBP20.6■□□□□ 0.89
PXN-205ENST00000440827 JDP2Q8WYK2 163 aa20.6■□□□□ 0.89
PXN-205ENST00000440827 DICER1Q9UPY3 1922 aaKnown RBP20.59■□□□□ 0.89
PXN-205ENST00000440827 FLIIQ13045 1269 aa20.59■□□□□ 0.89
PXN-205ENST00000440827 SF3B3Q15393 1217 aaKnown RBP20.59■□□□□ 0.89
PXN-205ENST00000440827 SP8Q8IXZ3 490 aa20.59■□□□□ 0.89
PXN-205ENST00000440827 LARGE2Q8N3Y3 721 aa20.59■□□□□ 0.89
PXN-205ENST00000440827 LAMB2P55268 1798 aa20.59■□□□□ 0.89
PXN-205ENST00000440827 ZNF541Q9H0D2 1346 aa20.58■□□□□ 0.89
PXN-205ENST00000440827 PCCAP05165 728 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms