RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 KRT24Q2M2I5 525 aa23.9■■□□□ 1.42
GTF3A-204ENST00000438571 GIGYF2Q6Y7W6 1299 aaKnown RBP23.9■■□□□ 1.42
GTF3A-204ENST00000438571 MYBBP1AQ9BQG0 1328 aaKnown RBP23.89■■□□□ 1.42
GTF3A-204ENST00000438571 ALDH1B1P30837 517 aa23.89■■□□□ 1.41
GTF3A-204ENST00000438571 IARSP41252 1262 aaKnown RBP23.89■■□□□ 1.41
GTF3A-204ENST00000438571 SYNE4Q8N205 404 aa23.89■■□□□ 1.41
GTF3A-204ENST00000438571 NECTIN2Q92692 538 aa23.89■■□□□ 1.41
GTF3A-204ENST00000438571 NEUROD2Q15784 382 aa23.88■■□□□ 1.41
GTF3A-204ENST00000438571 CHADLQ6NUI6 762 aa23.88■■□□□ 1.41
GTF3A-204ENST00000438571 RTKN2Q8IZC4 609 aa23.88■■□□□ 1.41
GTF3A-204ENST00000438571 L3MBTL3Q96JM7 780 aaPredicted RBP23.88■■□□□ 1.41
GTF3A-204ENST00000438571 TAF1DQ9H5J8 278 aaPredicted RBP23.87■■□□□ 1.41
GTF3A-204ENST00000438571 RPGRQ92834 1020 aaKnown RBP23.86■■□□□ 1.41
GTF3A-204ENST00000438571 RNF123Q5XPI4 1314 aa23.85■■□□□ 1.41
GTF3A-204ENST00000438571 TCERG1O14776 1098 aaKnown RBP23.85■■□□□ 1.41
GTF3A-204ENST00000438571 HOXA10P31260 410 aaPredicted RBP23.85■■□□□ 1.41
GTF3A-204ENST00000438571 FZD9O00144 591 aa23.84■■□□□ 1.41
GTF3A-204ENST00000438571 PSMD1Q99460 953 aa23.84■■□□□ 1.41
GTF3A-204ENST00000438571 TRIM35Q9UPQ4 493 aa23.84■■□□□ 1.41
GTF3A-204ENST00000438571 IQCA1LA6NCM1 817 aa23.83■■□□□ 1.41
GTF3A-204ENST00000438571 LMOD3Q0VAK6 560 aa23.83■■□□□ 1.41
GTF3A-204ENST00000438571 COL13A1Q5TAT6 717 aaPredicted RBP23.83■■□□□ 1.41
GTF3A-204ENST00000438571 PPEF1O14829 653 aaPredicted RBP23.82■■□□□ 1.4
GTF3A-204ENST00000438571 AIMP1Q12904 312 aaKnown RBP23.82■■□□□ 1.4
GTF3A-204ENST00000438571 EAPPQ56P03 285 aaPredicted RBP23.82■■□□□ 1.4
GTF3A-204ENST00000438571 COPS6Q7L5N1 327 aa23.82■■□□□ 1.4
GTF3A-204ENST00000438571 PPP1R42Q7Z4L9 355 aa23.82■■□□□ 1.4
GTF3A-204ENST00000438571 XAGE3Q8WTP9 111 aa23.82■■□□□ 1.4
GTF3A-204ENST00000438571 ZNF428Q96B54 188 aa23.82■■□□□ 1.4
GTF3A-204ENST00000438571 BABAM1Q9NWV8 329 aa23.82■■□□□ 1.4
GTF3A-204ENST00000438571 COL4A1P02462 1669 aa23.82■■□□□ 1.4
GTF3A-204ENST00000438571 PASKQ96RG2 1323 aa23.82■■□□□ 1.4
GTF3A-204ENST00000438571 LRRC37AA6NMS7 1700 aa23.81■■□□□ 1.4
GTF3A-204ENST00000438571 TRPM7Q96QT4 1865 aa23.81■■□□□ 1.4
GTF3A-204ENST00000438571 HSPA1AP0DMV8 641 aaKnown RBP23.81■■□□□ 1.4
GTF3A-204ENST00000438571 HSPA1BP0DMV9 641 aaKnown RBP23.81■■□□□ 1.4
GTF3A-204ENST00000438571 PARP10Q53GL7 1025 aa23.81■■□□□ 1.4
GTF3A-204ENST00000438571 LDHDQ86WU2 507 aa23.81■■□□□ 1.4
GTF3A-204ENST00000438571 CRAMP1Q96RY5 1269 aa23.81■■□□□ 1.4
GTF3A-204ENST00000438571 MKRN1Q9UHC7 482 aaKnown RBP23.81■■□□□ 1.4
GTF3A-204ENST00000438571 LAS1LQ9Y4W2 734 aaKnown RBP23.81■■□□□ 1.4
GTF3A-204ENST00000438571 CHL1O00533 1208 aa23.8■■□□□ 1.4
GTF3A-204ENST00000438571 RUNDC1Q96C34 613 aa23.8■■□□□ 1.4
GTF3A-204ENST00000438571 RBM17Q96I25 401 aaKnown RBP23.8■■□□□ 1.4
GTF3A-204ENST00000438571 HACL1Q9UJ83 578 aa23.8■■□□□ 1.4
GTF3A-204ENST00000438571 EPHX2P34913 555 aa23.79■■□□□ 1.4
GTF3A-204ENST00000438571 UTP14AQ9BVJ6 771 aaKnown RBP23.79■■□□□ 1.4
GTF3A-204ENST00000438571 CREBZFQ9NS37 354 aa23.79■■□□□ 1.4
GTF3A-204ENST00000438571 ADAMTS8Q9UP79 889 aa23.79■■□□□ 1.4
GTF3A-204ENST00000438571 ABCC4O15439 1325 aa23.79■■□□□ 1.4
GTF3A-204ENST00000438571 CC2D2BQ6DHV5 1058 aa23.78■■□□□ 1.4
GTF3A-204ENST00000438571 NLRP10Q86W26 655 aa23.78■■□□□ 1.4
GTF3A-204ENST00000438571 CHPF2Q9P2E5 772 aa23.78■■□□□ 1.4
GTF3A-204ENST00000438571 DUOX1Q9NRD9 1551 aa23.78■■□□□ 1.4
GTF3A-204ENST00000438571 WDR43Q15061 677 aaKnown RBP eCLIP23.77■■□□□ 1.4
GTF3A-204ENST00000438571 NLRP3Q96P20 1036 aa23.77■■□□□ 1.4
GTF3A-204ENST00000438571 DDX21Q9NR30 783 aaKnown RBP eCLIP23.77■■□□□ 1.4
GTF3A-204ENST00000438571 GJA3Q9Y6H8 435 aa23.77■■□□□ 1.4
GTF3A-204ENST00000438571 ITGBL1O95965 494 aaPredicted RBP23.76■■□□□ 1.39
GTF3A-204ENST00000438571 HCLS1P14317 486 aaPredicted RBP23.76■■□□□ 1.39
GTF3A-204ENST00000438571 SLC10A5Q5PT55 438 aa23.76■■□□□ 1.39
GTF3A-204ENST00000438571 GPC2Q8N158 579 aa23.76■■□□□ 1.39
GTF3A-204ENST00000438571 JDP2Q8WYK2 163 aa23.76■■□□□ 1.39
GTF3A-204ENST00000438571 MAP1SQ66K74 1059 aaPredicted RBP23.75■■□□□ 1.39
GTF3A-204ENST00000438571 LARGE2Q8N3Y3 721 aa23.75■■□□□ 1.39
GTF3A-204ENST00000438571 CLEC11AQ9Y240 323 aa23.75■■□□□ 1.39
GTF3A-204ENST00000438571 TCIRG1Q13488 830 aa23.74■■□□□ 1.39
GTF3A-204ENST00000438571 CNTNAP1P78357 1384 aa23.74■■□□□ 1.39
GTF3A-204ENST00000438571 SCNN1DP51172 638 aa23.73■■□□□ 1.39
GTF3A-204ENST00000438571 EIF6P56537 245 aaKnown RBP23.73■■□□□ 1.39
GTF3A-204ENST00000438571 AOC3Q16853 763 aa23.73■■□□□ 1.39
GTF3A-204ENST00000438571 HDGFL1Q5TGJ6 251 aa23.73■■□□□ 1.39
GTF3A-204ENST00000438571 ATP6V0A2Q9Y487 856 aa23.73■■□□□ 1.39
GTF3A-204ENST00000438571 PPIP5K2O43314 1243 aa23.72■■□□□ 1.39
GTF3A-204ENST00000438571 HSP90AB3PQ58FF7 597 aa23.72■■□□□ 1.39
GTF3A-204ENST00000438571 PRKRIP1Q9H875 184 aaPredicted RBP23.72■■□□□ 1.39
GTF3A-204ENST00000438571 TRMT112Q9UI30 125 aaKnown RBP23.71■■□□□ 1.39
GTF3A-204ENST00000438571 SH3TC1Q8TE82 1336 aa23.7■■□□□ 1.38
GTF3A-204ENST00000438571 EPS15P42566 896 aa23.7■■□□□ 1.38
GTF3A-204ENST00000438571 NIM1KQ8IY84 436 aa23.7■■□□□ 1.38
GTF3A-204ENST00000438571 MBIPQ9NS73 344 aa23.7■■□□□ 1.38
GTF3A-204ENST00000438571 SPEF2Q9C093 1822 aa23.69■■□□□ 1.38
GTF3A-204ENST00000438571 FMR1Q06787 632 aaKnown RBP eCLIP23.69■■□□□ 1.38
GTF3A-204ENST00000438571 PNMA8AQ86V59 439 aaPredicted RBP23.69■■□□□ 1.38
GTF3A-204ENST00000438571 CNTROBQ8N137 903 aa23.69■■□□□ 1.38
GTF3A-204ENST00000438571 TMEM88BA6NKF7 163 aa23.68■■□□□ 1.38
GTF3A-204ENST00000438571 GRIPAP1Q4V328 841 aa23.68■■□□□ 1.38
GTF3A-204ENST00000438571 POLR2AP24928 1970 aaKnown RBP23.68■■□□□ 1.38
GTF3A-204ENST00000438571 ATP5J2-PTCD1G3V325 749 aa23.67■■□□□ 1.38
GTF3A-204ENST00000438571 DUSP27Q5VZP5 1158 aa23.67■■□□□ 1.38
GTF3A-204ENST00000438571 PLBD2Q8NHP8 589 aa23.67■■□□□ 1.38
GTF3A-204ENST00000438571 CFAP44Q96MT7 982 aa23.67■■□□□ 1.38
GTF3A-204ENST00000438571 ISCA1Q9BUE6 129 aa23.67■■□□□ 1.38
GTF3A-204ENST00000438571 SCN9AQ15858 1988 aa23.67■■□□□ 1.38
GTF3A-204ENST00000438571 THSD7BQ9C0I4 1608 aa23.66■■□□□ 1.38
GTF3A-204ENST00000438571 HOXB7P09629 217 aa23.66■■□□□ 1.38
GTF3A-204ENST00000438571 LMOD1P29536 600 aaPredicted RBP23.66■■□□□ 1.38
GTF3A-204ENST00000438571 VEGFBP49765 207 aa23.66■■□□□ 1.38
GTF3A-204ENST00000438571 GRAPQ13588 217 aa23.66■■□□□ 1.38
GTF3A-204ENST00000438571 GRAPLQ8TC17 118 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms