RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 PI4KAP2A4QPH2 592 aa13.52□□□□□ -0.25
ERGIC3-207ENST00000438317 APBB1O00213 710 aa13.52□□□□□ -0.25
ERGIC3-207ENST00000438317 EPB41L2O43491 1005 aaKnown RBP13.52□□□□□ -0.25
ERGIC3-207ENST00000438317 PHF14O94880 888 aa13.52□□□□□ -0.25
ERGIC3-207ENST00000438317 PI4KAP1Q8N8J0 262 aa13.52□□□□□ -0.25
ERGIC3-207ENST00000438317 DDX21Q9NR30 783 aaKnown RBP eCLIP13.52□□□□□ -0.25
ERGIC3-207ENST00000438317 SALL3Q9BXA9 1300 aa13.51□□□□□ -0.25
ERGIC3-207ENST00000438317 PNMA6EA0A0J9YXQ4 647 aa13.51□□□□□ -0.25
ERGIC3-207ENST00000438317 ERC2O15083 957 aa13.51□□□□□ -0.25
ERGIC3-207ENST00000438317 OTUD7AQ8TE49 926 aaPredicted RBP13.51□□□□□ -0.25
ERGIC3-207ENST00000438317 AK7Q96M32 723 aa13.51□□□□□ -0.25
ERGIC3-207ENST00000438317 KIF2CQ99661 725 aa13.51□□□□□ -0.25
ERGIC3-207ENST00000438317 SLC52A2Q9HAB3 445 aa13.51□□□□□ -0.25
ERGIC3-207ENST00000438317 NMRK2Q9NPI5 230 aa13.51□□□□□ -0.25
ERGIC3-207ENST00000438317 EXOC6BQ9Y2D4 811 aa13.51□□□□□ -0.25
ERGIC3-207ENST00000438317 KIAA1551Q9HCM1 1747 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 CYP27B1O15528 508 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 PHKG2P15735 406 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 MX1P20591 662 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 SSFA2P28290 1259 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 HTRA3P83110 453 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 MTX1Q13505 466 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 PPP1R42Q7Z4L9 355 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 DCAF5Q96JK2 942 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 ITGB4P16144 1822 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 WDR90Q96KV7 1748 aa13.5□□□□□ -0.25
ERGIC3-207ENST00000438317 K7ELQ4 463 aaPredicted RBP13.49□□□□□ -0.25
ERGIC3-207ENST00000438317 SURF6O75683 361 aaKnown RBP13.49□□□□□ -0.25
ERGIC3-207ENST00000438317 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
ERGIC3-207ENST00000438317 LINC00116Q8NCU8 138 aa13.49□□□□□ -0.25
ERGIC3-207ENST00000438317 LINS1Q8NG48 757 aa13.49□□□□□ -0.25
ERGIC3-207ENST00000438317 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
ERGIC3-207ENST00000438317 KIF1BPQ96EK5 621 aa13.49□□□□□ -0.25
ERGIC3-207ENST00000438317 AK9Q5TCS8 1911 aa13.49□□□□□ -0.25
ERGIC3-207ENST00000438317 KIF13BQ9NQT8 1826 aa13.48□□□□□ -0.25
ERGIC3-207ENST00000438317 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
ERGIC3-207ENST00000438317 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
ERGIC3-207ENST00000438317 PTMSP20962 102 aa13.48□□□□□ -0.25
ERGIC3-207ENST00000438317 ERC1Q8IUD2 1116 aa13.48□□□□□ -0.25
ERGIC3-207ENST00000438317 RBM46Q8TBY0 533 aaKnown RBP13.48□□□□□ -0.25
ERGIC3-207ENST00000438317 PIGBQ92521 554 aa13.48□□□□□ -0.25
ERGIC3-207ENST00000438317 KLRG1Q96E93 195 aa13.48□□□□□ -0.25
ERGIC3-207ENST00000438317 C9orf78Q9NZ63 289 aaPredicted RBP13.48□□□□□ -0.25
ERGIC3-207ENST00000438317 MAP3K2Q9Y2U5 619 aa13.48□□□□□ -0.25
ERGIC3-207ENST00000438317 SRGAP3O43295 1099 aa13.47□□□□□ -0.25
ERGIC3-207ENST00000438317 DDIT3P35638 169 aa13.47□□□□□ -0.25
ERGIC3-207ENST00000438317 RHPN1Q8TCX5 695 aa13.47□□□□□ -0.25
ERGIC3-207ENST00000438317 PKD1L3Q7Z443 1732 aa13.47□□□□□ -0.25
ERGIC3-207ENST00000438317 UTYO14607 1347 aa13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 A0A0G2JLW4 131 aa13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 HSP90AA1P07900 732 aaKnown RBP13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 MMP10P09238 476 aa13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 SNRPA1P09661 255 aaKnown RBP13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 NBPF7P0C2Y1 421 aaPredicted RBP13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 MCCP23508 829 aa13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 MCM4P33991 863 aa13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 TGFB2P61812 414 aa13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
ERGIC3-207ENST00000438317 LOC102724428A0A0B4J2F2 783 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 ST18O60284 1047 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 CAPN15O75808 1086 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 SIK1P57059 783 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 NEXNQ0ZGT2 675 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 ITPK1Q13572 414 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 TTC5Q8N0Z6 440 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 SPRYD3Q8NCJ5 442 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 BCL11AQ9H165 835 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 PCNTO95613 3336 aa13.45□□□□□ -0.26
ERGIC3-207ENST00000438317 CHMLP26374 656 aa13.44□□□□□ -0.26
ERGIC3-207ENST00000438317 MCM2P49736 904 aa13.44□□□□□ -0.26
ERGIC3-207ENST00000438317 PRELPP51888 382 aa13.44□□□□□ -0.26
ERGIC3-207ENST00000438317 ANAPC15P60006 121 aa13.44□□□□□ -0.26
ERGIC3-207ENST00000438317 PDIA6Q15084 440 aa13.44□□□□□ -0.26
ERGIC3-207ENST00000438317 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
ERGIC3-207ENST00000438317 ESYT1Q9BSJ8 1104 aa13.44□□□□□ -0.26
ERGIC3-207ENST00000438317 CWC22Q9HCG8 908 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-207ENST00000438317 TTC41PQ6P2S7 1318 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 USP42Q9H9J4 1324 aaKnown RBP13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 MRC1P22897 1456 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 DDX11L8A8MPP1 907 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 GRM8O00222 908 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 GNPATO15228 680 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 KDM6AO15550 1401 aaPredicted RBP13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 ANXA1P04083 346 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 KCNA3P22001 575 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 CABP4P57796 275 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 FSTL1Q12841 308 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 C10orf71Q711Q0 1435 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 RIC3Q7Z5B4 369 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 IL17RAQ96F46 866 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 GBP4Q96PP9 640 aa13.43□□□□□ -0.26
ERGIC3-207ENST00000438317 ERBB4Q15303 1308 aa13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 BRCA1P38398 1863 aaKnown RBP13.42□□□□□ -0.26
ERGIC3-207ENST00000438317 ERVV-2B6SEH9 535 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms