RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 ZNF277Q9NRM2 450 aaPredicted RBP8.14□□□□□ -1.11
PNKDP1-201ENST00000435914 TSPYL4Q9UJ04 414 aa8.14□□□□□ -1.11
PNKDP1-201ENST00000435914 TRIM35Q9UPQ4 493 aa8.14□□□□□ -1.11
PNKDP1-201ENST00000435914 PASKQ96RG2 1323 aa8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 LTBP1Q14766 1721 aa8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 ANXA1P04083 346 aa8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 IARSP41252 1262 aaKnown RBP8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 DDX10Q13206 875 aaKnown RBP8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 KRT24Q2M2I5 525 aa8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 CC2D2BQ6DHV5 1058 aa8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 CHADLQ6NUI6 762 aa8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 KIF6Q6ZMV9 814 aa8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 SYNE4Q8N205 404 aa8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 CRAMP1Q96RY5 1269 aa8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 TAF1DQ9H5J8 278 aaPredicted RBP8.13□□□□□ -1.11
PNKDP1-201ENST00000435914 ITGBL1O95965 494 aaPredicted RBP8.12□□□□□ -1.11
PNKDP1-201ENST00000435914 GTF2E1P29083 439 aaPredicted RBP8.12□□□□□ -1.11
PNKDP1-201ENST00000435914 LMOD3Q0VAK6 560 aa8.12□□□□□ -1.11
PNKDP1-201ENST00000435914 PARP10Q53GL7 1025 aa8.12□□□□□ -1.11
PNKDP1-201ENST00000435914 RNF123Q5XPI4 1314 aa8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 IQCA1LA6NCM1 817 aa8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 EIF2S2P20042 333 aaKnown RBP8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 COPS6Q7L5N1 327 aa8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 NLRP10Q86W26 655 aa8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 LDHDQ86WU2 507 aa8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 CCDC146Q8IYE0 955 aa8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 RUNDC1Q96C34 613 aa8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 DDX21Q9NR30 783 aaKnown RBP eCLIP8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 CREBZFQ9NS37 354 aa8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 ADAMTS8Q9UP79 889 aa8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 DDX60Q8IY21 1712 aaKnown RBP8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 TAF1P21675 1872 aa8.11□□□□□ -1.11
PNKDP1-201ENST00000435914 DUOX1Q9NRD9 1551 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 ABCC4O15439 1325 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 LRRC37AA6NMS7 1700 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 ZNF853P0CG23 659 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 TCIRG1Q13488 830 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 GRIPAP1Q4V328 841 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 COL13A1Q5TAT6 717 aaPredicted RBP8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 PPP1R42Q7Z4L9 355 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 GPC2Q8N158 579 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 XAGE3Q8WTP9 111 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 RPGRQ92834 1020 aaKnown RBP8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 UTP14AQ9BVJ6 771 aaKnown RBP8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 RTFDC1Q9BY42 306 aaPredicted RBP8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 PRKRIP1Q9H875 184 aaPredicted RBP8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 HACL1Q9UJ83 578 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 ATP6V0A2Q9Y487 856 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 COL4A1P02462 1669 aa8.1□□□□□ -1.11
PNKDP1-201ENST00000435914 PPEF1O14829 653 aaPredicted RBP8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 HOXB7P09629 217 aa8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 EPHX2P34913 555 aa8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 SCNN1DP51172 638 aa8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 NEUROD2Q15784 382 aa8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 HSP90AB3PQ58FF7 597 aa8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 NECTIN2Q92692 538 aa8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 RBM17Q96I25 401 aaKnown RBP8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 CFAP44Q96MT7 982 aa8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 NLRP3Q96P20 1036 aa8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 ISCA1Q9BUE6 129 aa8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 CHPF2Q9P2E5 772 aa8.09□□□□□ -1.11
PNKDP1-201ENST00000435914 CNTNAP1P78357 1384 aa8.09□□□□□ -1.12
PNKDP1-201ENST00000435914 HSPA1AP0DMV8 641 aaKnown RBP8.08□□□□□ -1.12
PNKDP1-201ENST00000435914 HSPA1BP0DMV9 641 aaKnown RBP8.08□□□□□ -1.12
PNKDP1-201ENST00000435914 HCLS1P14317 486 aaPredicted RBP8.08□□□□□ -1.12
PNKDP1-201ENST00000435914 AIMP1Q12904 312 aaKnown RBP8.08□□□□□ -1.12
PNKDP1-201ENST00000435914 PNMA8AQ86V59 439 aaPredicted RBP8.08□□□□□ -1.12
PNKDP1-201ENST00000435914 JDP2Q8WYK2 163 aa8.08□□□□□ -1.12
PNKDP1-201ENST00000435914 VPS33BQ9H267 617 aa8.08□□□□□ -1.12
PNKDP1-201ENST00000435914 SH3TC1Q8TE82 1336 aa8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 BBOX1O75936 387 aa8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 EPS15P42566 896 aa8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 TRIM28Q13263 835 aaKnown RBP8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 WDR43Q15061 677 aaKnown RBP eCLIP8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 HDGFL1Q5TGJ6 251 aa8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 MAP1SQ66K74 1059 aaPredicted RBP8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 SP8Q8IXZ3 490 aa8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 LARGE2Q8N3Y3 721 aa8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 PLBD2Q8NHP8 589 aa8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 MBIPQ9NS73 344 aa8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 MKRN1Q9UHC7 482 aaKnown RBP8.07□□□□□ -1.12
PNKDP1-201ENST00000435914 RASSF10A6NK89 507 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 TMEM88BA6NKF7 163 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 TCERG1O14776 1098 aaKnown RBP8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 PPIP5K2O43314 1243 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 EIF6P56537 245 aaKnown RBP8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 CXCL9Q07325 125 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 KIAA2012Q0VF49 1180 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 GRAPQ13588 217 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 SF3B3Q15393 1217 aaKnown RBP8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 AOC3Q16853 763 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 EAPPQ56P03 285 aaPredicted RBP8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 DUSP27Q5VZP5 1158 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 ANKRD13DQ6ZTN6 518 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 CNTROBQ8N137 903 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 GRAPLQ8TC17 118 aaPredicted RBP8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 DBF4Q9UBU7 674 aaPredicted RBP8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 TRMT112Q9UI30 125 aaKnown RBP8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 THSD7BQ9C0I4 1608 aa8.06□□□□□ -1.12
PNKDP1-201ENST00000435914 TRPM7Q96QT4 1865 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms