RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 COL11A2P13942 1736 aaPredicted RBP23.34■■□□□ 1.33
CLOCK-203ENST00000435527 TCERG1O14776 1098 aaKnown RBP23.34■■□□□ 1.33
CLOCK-203ENST00000435527 PRPF40BQ6NWY9 871 aaKnown RBP23.34■■□□□ 1.33
CLOCK-203ENST00000435527 RIC3Q7Z5B4 369 aa23.34■■□□□ 1.33
CLOCK-203ENST00000435527 C7orf43Q8WVR3 580 aa23.34■■□□□ 1.33
CLOCK-203ENST00000435527 TRIM28Q13263 835 aaKnown RBP23.33■■□□□ 1.33
CLOCK-203ENST00000435527 C9orf131Q5VYM1 1079 aa23.33■■□□□ 1.33
CLOCK-203ENST00000435527 SYNE4Q8N205 404 aa23.33■■□□□ 1.33
CLOCK-203ENST00000435527 MYH16Q9H6N6 1097 aa23.33■■□□□ 1.33
CLOCK-203ENST00000435527 ZNF219Q9P2Y4 722 aaPredicted RBP23.33■■□□□ 1.33
CLOCK-203ENST00000435527 RIC1Q4ADV7 1423 aa23.33■■□□□ 1.32
CLOCK-203ENST00000435527 ATP5J2-PTCD1G3V325 749 aa23.32■■□□□ 1.32
CLOCK-203ENST00000435527 NFKBIEO00221 500 aa23.32■■□□□ 1.32
CLOCK-203ENST00000435527 ALDH1B1P30837 517 aa23.32■■□□□ 1.32
CLOCK-203ENST00000435527 HOXA10P31260 410 aaPredicted RBP23.32■■□□□ 1.32
CLOCK-203ENST00000435527 PRELPP51888 382 aa23.32■■□□□ 1.32
CLOCK-203ENST00000435527 C3orf67Q6ZVT6 689 aa23.32■■□□□ 1.32
CLOCK-203ENST00000435527 TRMT112Q9UI30 125 aaKnown RBP23.32■■□□□ 1.32
CLOCK-203ENST00000435527 RNF123Q5XPI4 1314 aa23.32■■□□□ 1.32
CLOCK-203ENST00000435527 SLC4A2P04920 1241 aa23.31■■□□□ 1.32
CLOCK-203ENST00000435527 RASSF7Q02833 373 aa23.31■■□□□ 1.32
CLOCK-203ENST00000435527 MIER1Q8N108 512 aa23.31■■□□□ 1.32
CLOCK-203ENST00000435527 NLRP3Q96P20 1036 aa23.31■■□□□ 1.32
CLOCK-203ENST00000435527 STK31Q9BXU1 1019 aa23.31■■□□□ 1.32
CLOCK-203ENST00000435527 G2E3Q7L622 706 aa23.3■■□□□ 1.32
CLOCK-203ENST00000435527 SLX4Q8IY92 1834 aa23.29■■□□□ 1.32
CLOCK-203ENST00000435527 ZNF428Q96B54 188 aa23.29■■□□□ 1.32
CLOCK-203ENST00000435527 SH3TC1Q8TE82 1336 aa23.29■■□□□ 1.32
CLOCK-203ENST00000435527 DDX58O95786 925 aaKnown RBP23.28■■□□□ 1.32
CLOCK-203ENST00000435527 HCLS1P14317 486 aaPredicted RBP23.28■■□□□ 1.32
CLOCK-203ENST00000435527 KSR2Q6VAB6 950 aa23.28■■□□□ 1.32
CLOCK-203ENST00000435527 METTL22Q9BUU2 404 aaPredicted RBP23.28■■□□□ 1.32
CLOCK-203ENST00000435527 RNF181Q9P0P0 153 aa23.28■■□□□ 1.32
CLOCK-203ENST00000435527 PI4KAP2A4QPH2 592 aa23.27■■□□□ 1.32
CLOCK-203ENST00000435527 LMNB1P20700 586 aa23.27■■□□□ 1.32
CLOCK-203ENST00000435527 PI4KAP1Q8N8J0 262 aa23.27■■□□□ 1.32
CLOCK-203ENST00000435527 RPGRQ92834 1020 aaKnown RBP23.27■■□□□ 1.32
CLOCK-203ENST00000435527 CRAMP1Q96RY5 1269 aa23.27■■□□□ 1.32
CLOCK-203ENST00000435527 MYD88Q99836 296 aa23.27■■□□□ 1.32
CLOCK-203ENST00000435527 TNRC6CQ9HCJ0 1690 aaKnown RBP23.27■■□□□ 1.32
CLOCK-203ENST00000435527 SOGA3Q5TF21 947 aa23.26■■□□□ 1.31
CLOCK-203ENST00000435527 FAM89AQ96GI7 184 aa23.26■■□□□ 1.31
CLOCK-203ENST00000435527 RBM17Q96I25 401 aaKnown RBP23.26■■□□□ 1.31
CLOCK-203ENST00000435527 MAP3K2Q9Y2U5 619 aa23.26■■□□□ 1.31
CLOCK-203ENST00000435527 ANKRD36CQ5JPF3 1778 aa23.26■■□□□ 1.31
CLOCK-203ENST00000435527 OLFM4Q6UX06 510 aa23.25■■□□□ 1.31
CLOCK-203ENST00000435527 SLFN5Q08AF3 891 aa23.24■■□□□ 1.31
CLOCK-203ENST00000435527 CCDC191Q8NCU4 936 aa23.24■■□□□ 1.31
CLOCK-203ENST00000435527 ZNF526Q8TF50 670 aaPredicted RBP23.24■■□□□ 1.31
CLOCK-203ENST00000435527 GPBP1L1Q9HC44 474 aaPredicted RBP23.24■■□□□ 1.31
CLOCK-203ENST00000435527 LTBP3Q9NS15 1303 aa23.24■■□□□ 1.31
CLOCK-203ENST00000435527 E9PSI1 815 aa23.23■■□□□ 1.31
CLOCK-203ENST00000435527 FLIIQ13045 1269 aa23.23■■□□□ 1.31
CLOCK-203ENST00000435527 CCDC93Q567U6 631 aa23.23■■□□□ 1.31
CLOCK-203ENST00000435527 SBF1O95248 1867 aa23.23■■□□□ 1.31
CLOCK-203ENST00000435527 ZBTB38Q8NAP3 1195 aaPredicted RBP23.22■■□□□ 1.31
CLOCK-203ENST00000435527 TAOK3Q9H2K8 898 aa23.22■■□□□ 1.31
CLOCK-203ENST00000435527 IGKV5-2P06315 115 aa23.21■■□□□ 1.31
CLOCK-203ENST00000435527 RTL5Q5HYW3 569 aaPredicted RBP23.21■■□□□ 1.31
CLOCK-203ENST00000435527 RTKN2Q8IZC4 609 aa23.21■■□□□ 1.31
CLOCK-203ENST00000435527 CDCA7LQ96GN5 454 aa23.21■■□□□ 1.31
CLOCK-203ENST00000435527 ARFGEF2Q9Y6D5 1785 aa23.21■■□□□ 1.31
CLOCK-203ENST00000435527 SF3B3Q15393 1217 aaKnown RBP23.2■■□□□ 1.3
CLOCK-203ENST00000435527 TRMT2AQ8IZ69 625 aaKnown RBP23.2■■□□□ 1.3
CLOCK-203ENST00000435527 CWC25Q9NXE8 425 aaPredicted RBP23.2■■□□□ 1.3
CLOCK-203ENST00000435527 FER1L6Q2WGJ9 1857 aa23.19■■□□□ 1.3
CLOCK-203ENST00000435527 IRS4O14654 1257 aaPredicted RBP23.19■■□□□ 1.3
CLOCK-203ENST00000435527 PCCAP05165 728 aaPredicted RBP23.19■■□□□ 1.3
CLOCK-203ENST00000435527 CC2D2BQ6DHV5 1058 aa23.19■■□□□ 1.3
CLOCK-203ENST00000435527 ABCC4O15439 1325 aa23.18■■□□□ 1.3
CLOCK-203ENST00000435527 ZC3H4Q9UPT8 1303 aaKnown RBP23.18■■□□□ 1.3
CLOCK-203ENST00000435527 BBOX1O75936 387 aa23.18■■□□□ 1.3
CLOCK-203ENST00000435527 FKBP4Q02790 459 aaKnown RBP eCLIP23.18■■□□□ 1.3
CLOCK-203ENST00000435527 SNED1Q8TER0 1413 aa23.17■■□□□ 1.3
CLOCK-203ENST00000435527 PPEF1O14829 653 aaPredicted RBP23.17■■□□□ 1.3
CLOCK-203ENST00000435527 FKBP5Q13451 457 aaPredicted RBP23.17■■□□□ 1.3
CLOCK-203ENST00000435527 SLC51AQ86UW1 340 aa23.17■■□□□ 1.3
CLOCK-203ENST00000435527 JARID2Q92833 1246 aaPredicted RBP23.17■■□□□ 1.3
CLOCK-203ENST00000435527 CACNA1SQ13698 1873 aa23.17■■□□□ 1.3
CLOCK-203ENST00000435527 NEURL1BA8MQ27 555 aa23.16■■□□□ 1.3
CLOCK-203ENST00000435527 NEXNQ0ZGT2 675 aa23.16■■□□□ 1.3
CLOCK-203ENST00000435527 CWF19L2Q2TBE0 894 aaKnown RBP23.16■■□□□ 1.3
CLOCK-203ENST00000435527 DDX46Q7L014 1031 aaKnown RBP23.16■■□□□ 1.3
CLOCK-203ENST00000435527 DNAAF4Q8WXU2 420 aa23.16■■□□□ 1.3
CLOCK-203ENST00000435527 KIF3CO14782 793 aa23.15■■□□□ 1.3
CLOCK-203ENST00000435527 GRAPQ13588 217 aa23.15■■□□□ 1.3
CLOCK-203ENST00000435527 GRIPAP1Q4V328 841 aa23.15■■□□□ 1.3
CLOCK-203ENST00000435527 GRAPLQ8TC17 118 aaPredicted RBP23.15■■□□□ 1.3
CLOCK-203ENST00000435527 PSMD1Q99460 953 aa23.15■■□□□ 1.3
CLOCK-203ENST00000435527 ATP6V0A2Q9Y487 856 aa23.15■■□□□ 1.3
CLOCK-203ENST00000435527 SP8Q8IXZ3 490 aa23.14■■□□□ 1.29
CLOCK-203ENST00000435527 NMRK2Q9NPI5 230 aa23.14■■□□□ 1.29
CLOCK-203ENST00000435527 ZNF277Q9NRM2 450 aaPredicted RBP23.14■■□□□ 1.29
CLOCK-203ENST00000435527 GLTPD2A6NH11 291 aa23.13■■□□□ 1.29
CLOCK-203ENST00000435527 H7C1W4 665 aa23.13■■□□□ 1.29
CLOCK-203ENST00000435527 HSP90B1P14625 803 aaKnown RBP23.13■■□□□ 1.29
CLOCK-203ENST00000435527 C1QTNF8P60827 252 aa23.13■■□□□ 1.29
CLOCK-203ENST00000435527 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
CLOCK-203ENST00000435527 CDHR2Q9BYE9 1310 aa23.12■■□□□ 1.29
CLOCK-203ENST00000435527 PDE8AO60658 829 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms