RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 H7C1W4 665 aa28.77■■■□□ 2.2
MBD3-202ENST00000434436 PTMSP20962 102 aa28.77■■■□□ 2.2
MBD3-202ENST00000434436 RASEFQ8IZ41 740 aa28.77■■■□□ 2.2
MBD3-202ENST00000434436 TJP1Q07157 1748 aa28.77■■■□□ 2.2
MBD3-202ENST00000434436 NOL8Q76FK4 1167 aaKnown RBP28.77■■■□□ 2.2
MBD3-202ENST00000434436 FSD2A1L4K1 749 aa28.76■■■□□ 2.19
MBD3-202ENST00000434436 PTH1RQ03431 593 aa28.75■■■□□ 2.19
MBD3-202ENST00000434436 BOLA2Q9H3K6 86 aa28.75■■■□□ 2.19
MBD3-202ENST00000434436 BTG4Q9NY30 223 aa28.75■■■□□ 2.19
MBD3-202ENST00000434436 FOXO4P98177 505 aa28.74■■■□□ 2.19
MBD3-202ENST00000434436 SKOR2Q2VWA4 1001 aaPredicted RBP28.74■■■□□ 2.19
MBD3-202ENST00000434436 TFCP2Q12800 502 aa28.74■■■□□ 2.19
MBD3-202ENST00000434436 LMBR1LQ6UX01 489 aa28.73■■■□□ 2.19
MBD3-202ENST00000434436 L1TD1Q5T7N2 865 aaKnown RBP28.73■■■□□ 2.19
MBD3-202ENST00000434436 IL27Q8NEV9 243 aa28.73■■■□□ 2.19
MBD3-202ENST00000434436 ZBTB3Q9H5J0 574 aa28.73■■■□□ 2.19
MBD3-202ENST00000434436 CWC25Q9NXE8 425 aaPredicted RBP28.73■■■□□ 2.19
MBD3-202ENST00000434436 TMOD3Q9NYL9 352 aa28.73■■■□□ 2.19
MBD3-202ENST00000434436 INTS4Q96HW7 963 aaKnown RBP28.72■■■□□ 2.19
MBD3-202ENST00000434436 GOLGA6L22H0YM25 854 aa28.72■■■□□ 2.19
MBD3-202ENST00000434436 TNNI3KQ59H18 835 aa28.72■■■□□ 2.19
MBD3-202ENST00000434436 FPGT-TNNI3KV9GXZ4 949 aa28.72■■■□□ 2.19
MBD3-202ENST00000434436 FAM227BQ96M60 508 aa28.71■■■□□ 2.19
MBD3-202ENST00000434436 TTC14Q96N46 770 aa28.71■■■□□ 2.19
MBD3-202ENST00000434436 DBNLQ9UJU6 430 aaKnown RBP28.71■■■□□ 2.19
MBD3-202ENST00000434436 GOLGA6L3A6NEY3 463 aa28.71■■■□□ 2.19
MBD3-202ENST00000434436 NMIQ13287 307 aaPredicted RBP28.71■■■□□ 2.19
MBD3-202ENST00000434436 HIP1O00291 1037 aa28.7■■■□□ 2.18
MBD3-202ENST00000434436 ITGB4P16144 1822 aa28.69■■■□□ 2.18
MBD3-202ENST00000434436 MCTP1Q6DN14 999 aa28.69■■■□□ 2.18
MBD3-202ENST00000434436 PIGBQ92521 554 aa28.69■■■□□ 2.18
MBD3-202ENST00000434436 ASAP1Q9ULH1 1129 aa28.69■■■□□ 2.18
MBD3-202ENST00000434436 CCDC171Q6TFL3 1326 aa28.68■■■□□ 2.18
MBD3-202ENST00000434436 CCDC191Q8NCU4 936 aa28.68■■■□□ 2.18
MBD3-202ENST00000434436 KCNB2Q92953 911 aa28.68■■■□□ 2.18
MBD3-202ENST00000434436 SNRKQ9NRH2 765 aa28.68■■■□□ 2.18
MBD3-202ENST00000434436 COL14A1Q05707 1796 aaKnown RBP28.68■■■□□ 2.18
MBD3-202ENST00000434436 ATP5JP18859 108 aa28.67■■■□□ 2.18
MBD3-202ENST00000434436 FSD1Q9BTV5 496 aa28.67■■■□□ 2.18
MBD3-202ENST00000434436 DISP2A7MBM2 1401 aa28.67■■■□□ 2.18
MBD3-202ENST00000434436 A0A0D9SFI3 127 aa28.66■■■□□ 2.18
MBD3-202ENST00000434436 NECTIN1Q15223 517 aa28.66■■■□□ 2.18
MBD3-202ENST00000434436 PRPF40BQ6NWY9 871 aaKnown RBP28.66■■■□□ 2.18
MBD3-202ENST00000434436 EDC3Q96F86 508 aaKnown RBP28.66■■■□□ 2.18
MBD3-202ENST00000434436 ARXQ96QS3 562 aa28.66■■■□□ 2.18
MBD3-202ENST00000434436 CHMP3Q9Y3E7 222 aa28.66■■■□□ 2.18
MBD3-202ENST00000434436 AK2P54819 239 aa28.65■■■□□ 2.18
MBD3-202ENST00000434436 ATG3Q9NT62 314 aa28.65■■■□□ 2.18
MBD3-202ENST00000434436 XRCC6P12956 609 aaKnown RBP eCLIP28.64■■■□□ 2.18
MBD3-202ENST00000434436 DNAJC10Q8IXB1 793 aa28.64■■■□□ 2.18
MBD3-202ENST00000434436 DBNDD2Q9BQY9 259 aa28.64■■■□□ 2.18
MBD3-202ENST00000434436 LMBRD1Q9NUN5 540 aa28.64■■■□□ 2.18
MBD3-202ENST00000434436 ROBO1Q9Y6N7 1651 aa28.64■■■□□ 2.18
MBD3-202ENST00000434436 ADCK5Q3MIX3 580 aa28.64■■■□□ 2.18
MBD3-202ENST00000434436 ATG9AQ7Z3C6 839 aa28.64■■■□□ 2.18
MBD3-202ENST00000434436 BRD1O95696 1058 aa28.63■■■□□ 2.17
MBD3-202ENST00000434436 CPA1P15085 419 aa28.63■■■□□ 2.17
MBD3-202ENST00000434436 MAP4K1Q92918 833 aa28.63■■■□□ 2.17
MBD3-202ENST00000434436 ISCA1Q9BUE6 129 aa28.63■■■□□ 2.17
MBD3-202ENST00000434436 RBM8AQ9Y5S9 174 aaKnown RBP28.63■■■□□ 2.17
MBD3-202ENST00000434436 CASTP20810 708 aaKnown RBP28.63■■■□□ 2.17
MBD3-202ENST00000434436 KLHL40Q2TBA0 621 aa28.63■■■□□ 2.17
MBD3-202ENST00000434436 RUFY3Q7L099 469 aa28.63■■■□□ 2.17
MBD3-202ENST00000434436 MED23Q9ULK4 1368 aa28.62■■■□□ 2.17
MBD3-202ENST00000434436 VSIG10Q8N0Z9 540 aa28.62■■■□□ 2.17
MBD3-202ENST00000434436 COL16A1Q07092 1604 aaPredicted RBP28.62■■■□□ 2.17
MBD3-202ENST00000434436 DDX49Q9Y6V7 483 aaKnown RBP28.62■■■□□ 2.17
MBD3-202ENST00000434436 FOXD4L5Q5VV16 416 aaPredicted RBP28.61■■■□□ 2.17
MBD3-202ENST00000434436 FOXD4L4Q8WXT5 416 aaPredicted RBP28.61■■■□□ 2.17
MBD3-202ENST00000434436 CHAMP1Q96JM3 812 aa28.61■■■□□ 2.17
MBD3-202ENST00000434436 TEX13AQ9BXU3 409 aaPredicted RBP28.61■■■□□ 2.17
MBD3-202ENST00000434436 TM6SF1Q9BZW5 370 aa28.61■■■□□ 2.17
MBD3-202ENST00000434436 TCIRG1Q13488 830 aa28.6■■■□□ 2.17
MBD3-202ENST00000434436 CREB3L3Q68CJ9 461 aa28.6■■■□□ 2.17
MBD3-202ENST00000434436 JAKMIP1Q96N16 626 aaKnown RBP28.6■■■□□ 2.17
MBD3-202ENST00000434436 NDUFB9Q9Y6M9 179 aa28.6■■■□□ 2.17
MBD3-202ENST00000434436 LARP6Q9BRS8 491 aaKnown RBP28.6■■■□□ 2.17
MBD3-202ENST00000434436 ZSWIM6Q9HCJ5 1215 aa28.6■■■□□ 2.17
MBD3-202ENST00000434436 ZNF330Q9Y3S2 320 aaPredicted RBP28.6■■■□□ 2.17
MBD3-202ENST00000434436 COL22A1Q8NFW1 1626 aaPredicted RBP28.6■■■□□ 2.17
MBD3-202ENST00000434436 LIMCH1Q9UPQ0 1083 aa28.59■■■□□ 2.17
MBD3-202ENST00000434436 AHDC1Q5TGY3 1603 aaPredicted RBP28.58■■■□□ 2.17
MBD3-202ENST00000434436 PLCH1Q4KWH8 1693 aa28.58■■■□□ 2.17
MBD3-202ENST00000434436 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.58■■■□□ 2.17
MBD3-202ENST00000434436 KAT6BQ8WYB5 2073 aa28.58■■■□□ 2.17
MBD3-202ENST00000434436 ZNF589Q86UQ0 364 aaPredicted RBP28.58■■■□□ 2.17
MBD3-202ENST00000434436 GAS2L3Q86XJ1 694 aa28.58■■■□□ 2.17
MBD3-202ENST00000434436 ZNF594Q96JF6 807 aaPredicted RBP28.58■■■□□ 2.17
MBD3-202ENST00000434436 HAUS7Q99871 368 aa28.58■■■□□ 2.17
MBD3-202ENST00000434436 JCADQ9P266 1359 aa28.57■■■□□ 2.16
MBD3-202ENST00000434436 SLC27A2O14975 620 aa28.57■■■□□ 2.16
MBD3-202ENST00000434436 VPS53Q5VIR6 699 aa28.57■■■□□ 2.16
MBD3-202ENST00000434436 ISY1Q9ULR0 285 aaKnown RBP28.57■■■□□ 2.16
MBD3-202ENST00000434436 BCL9O00512 1426 aa28.56■■■□□ 2.16
MBD3-202ENST00000434436 IL15P40933 162 aaPredicted RBP28.56■■■□□ 2.16
MBD3-202ENST00000434436 KCNJ4P48050 445 aa28.56■■■□□ 2.16
MBD3-202ENST00000434436 LRRC24Q50LG9 513 aa28.56■■■□□ 2.16
MBD3-202ENST00000434436 PDRG1Q9NUG6 133 aa28.56■■■□□ 2.16
MBD3-202ENST00000434436 PRPF40AO75400 957 aaKnown RBP28.55■■■□□ 2.16
MBD3-202ENST00000434436 ZKSCAN1P17029 563 aaPredicted RBP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms