RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 ADAMTSL1Q8N6G6 1762 aa29.74■■■□□ 2.35
HOMER3-203ENST00000433218 LMOD3Q0VAK6 560 aa29.74■■■□□ 2.35
HOMER3-203ENST00000433218 RUNDC1Q96C34 613 aa29.74■■■□□ 2.35
HOMER3-203ENST00000433218 LTBP1Q14766 1721 aa29.74■■■□□ 2.35
HOMER3-203ENST00000433218 COL4A1P02462 1669 aa29.74■■■□□ 2.35
HOMER3-203ENST00000433218 WDR43Q15061 677 aaKnown RBP eCLIP29.73■■■□□ 2.35
HOMER3-203ENST00000433218 SMC1BQ8NDV3 1235 aa29.73■■■□□ 2.35
HOMER3-203ENST00000433218 ZNF428Q96B54 188 aa29.73■■■□□ 2.35
HOMER3-203ENST00000433218 SOGA3Q5TF21 947 aa29.72■■■□□ 2.35
HOMER3-203ENST00000433218 NYXQ9GZU5 481 aa29.72■■■□□ 2.35
HOMER3-203ENST00000433218 LAS1LQ9Y4W2 734 aaKnown RBP29.72■■■□□ 2.35
HOMER3-203ENST00000433218 FKBP4Q02790 459 aaKnown RBP eCLIP29.71■■■□□ 2.35
HOMER3-203ENST00000433218 CHL1O00533 1208 aa29.71■■■□□ 2.35
HOMER3-203ENST00000433218 BABAM1Q9NWV8 329 aa29.7■■■□□ 2.34
HOMER3-203ENST00000433218 AIMP1Q12904 312 aaKnown RBP29.69■■■□□ 2.34
HOMER3-203ENST00000433218 XAGE3Q8WTP9 111 aa29.69■■■□□ 2.34
HOMER3-203ENST00000433218 DPY19L2Q6NUT2 758 aa29.68■■■□□ 2.34
HOMER3-203ENST00000433218 COPS6Q7L5N1 327 aa29.67■■■□□ 2.34
HOMER3-203ENST00000433218 SYNE4Q8N205 404 aa29.67■■■□□ 2.34
HOMER3-203ENST00000433218 CHPF2Q9P2E5 772 aa29.67■■■□□ 2.34
HOMER3-203ENST00000433218 LRRC37AA6NMS7 1700 aa29.67■■■□□ 2.34
HOMER3-203ENST00000433218 RPGRQ92834 1020 aaKnown RBP29.65■■■□□ 2.34
HOMER3-203ENST00000433218 KLRG1Q96E93 195 aa29.65■■■□□ 2.34
HOMER3-203ENST00000433218 TCERG1O14776 1098 aaKnown RBP29.64■■■□□ 2.34
HOMER3-203ENST00000433218 ALDH1B1P30837 517 aa29.64■■■□□ 2.34
HOMER3-203ENST00000433218 HOXA10P31260 410 aaPredicted RBP29.63■■■□□ 2.33
HOMER3-203ENST00000433218 IARSP41252 1262 aaKnown RBP29.63■■■□□ 2.33
HOMER3-203ENST00000433218 CCDC184Q52MB2 194 aa29.62■■■□□ 2.33
HOMER3-203ENST00000433218 DUOX1Q9NRD9 1551 aa29.62■■■□□ 2.33
HOMER3-203ENST00000433218 RTKN2Q8IZC4 609 aa29.62■■■□□ 2.33
HOMER3-203ENST00000433218 DDX21Q9NR30 783 aaKnown RBP eCLIP29.62■■■□□ 2.33
HOMER3-203ENST00000433218 MBIPQ9NS73 344 aa29.62■■■□□ 2.33
HOMER3-203ENST00000433218 PPEF1O14829 653 aaPredicted RBP29.61■■■□□ 2.33
HOMER3-203ENST00000433218 PARP10Q53GL7 1025 aa29.61■■■□□ 2.33
HOMER3-203ENST00000433218 NLRP10Q86W26 655 aa29.61■■■□□ 2.33
HOMER3-203ENST00000433218 L3MBTL3Q96JM7 780 aaPredicted RBP29.61■■■□□ 2.33
HOMER3-203ENST00000433218 ABCC4O15439 1325 aa29.6■■■□□ 2.33
HOMER3-203ENST00000433218 APAF1O14727 1248 aa29.6■■■□□ 2.33
HOMER3-203ENST00000433218 HDGFL1Q5TGJ6 251 aa29.6■■■□□ 2.33
HOMER3-203ENST00000433218 PPP1R42Q7Z4L9 355 aa29.6■■■□□ 2.33
HOMER3-203ENST00000433218 UTP14AQ9BVJ6 771 aaKnown RBP29.6■■■□□ 2.33
HOMER3-203ENST00000433218 HCLS1P14317 486 aaPredicted RBP29.59■■■□□ 2.33
HOMER3-203ENST00000433218 PSMD1Q99460 953 aa29.59■■■□□ 2.33
HOMER3-203ENST00000433218 RNF123Q5XPI4 1314 aa29.58■■■□□ 2.33
HOMER3-203ENST00000433218 FZD9O00144 591 aa29.57■■■□□ 2.32
HOMER3-203ENST00000433218 CRAMP1Q96RY5 1269 aa29.57■■■□□ 2.32
HOMER3-203ENST00000433218 TAF1DQ9H5J8 278 aaPredicted RBP29.57■■■□□ 2.32
HOMER3-203ENST00000433218 RBM17Q96I25 401 aaKnown RBP29.56■■■□□ 2.32
HOMER3-203ENST00000433218 CFAP44Q96MT7 982 aa29.56■■■□□ 2.32
HOMER3-203ENST00000433218 ZNF853P0CG23 659 aa29.55■■■□□ 2.32
HOMER3-203ENST00000433218 DUSP27Q5VZP5 1158 aa29.55■■■□□ 2.32
HOMER3-203ENST00000433218 TCIRG1Q13488 830 aa29.54■■■□□ 2.32
HOMER3-203ENST00000433218 CHADLQ6NUI6 762 aa29.54■■■□□ 2.32
HOMER3-203ENST00000433218 JMYQ8N9B5 988 aa29.54■■■□□ 2.32
HOMER3-203ENST00000433218 SPEF2Q9C093 1822 aa29.54■■■□□ 2.32
HOMER3-203ENST00000433218 SLC10A5Q5PT55 438 aa29.54■■■□□ 2.32
HOMER3-203ENST00000433218 NLRP3Q96P20 1036 aa29.54■■■□□ 2.32
HOMER3-203ENST00000433218 ATP5J2-PTCD1G3V325 749 aa29.51■■■□□ 2.31
HOMER3-203ENST00000433218 HOXB7P09629 217 aa29.51■■■□□ 2.31
HOMER3-203ENST00000433218 HSP90AB3PQ58FF7 597 aa29.51■■■□□ 2.31
HOMER3-203ENST00000433218 TRMT112Q9UI30 125 aaKnown RBP29.51■■■□□ 2.31
HOMER3-203ENST00000433218 IQCA1LA6NCM1 817 aa29.5■■■□□ 2.31
HOMER3-203ENST00000433218 EAPPQ56P03 285 aaPredicted RBP29.5■■■□□ 2.31
HOMER3-203ENST00000433218 ELL2O00472 640 aaPredicted RBP29.49■■■□□ 2.31
HOMER3-203ENST00000433218 IFFO2Q5TF58 517 aa29.49■■■□□ 2.31
HOMER3-203ENST00000433218 PLBD2Q8NHP8 589 aa29.49■■■□□ 2.31
HOMER3-203ENST00000433218 MYH3P11055 1940 aa29.49■■■□□ 2.31
HOMER3-203ENST00000433218 SH3TC1Q8TE82 1336 aa29.49■■■□□ 2.31
HOMER3-203ENST00000433218 PASKQ96RG2 1323 aa29.49■■■□□ 2.31
HOMER3-203ENST00000433218 TRPM7Q96QT4 1865 aa29.48■■■□□ 2.31
HOMER3-203ENST00000433218 AOC3Q16853 763 aa29.48■■■□□ 2.31
HOMER3-203ENST00000433218 CC2D2BQ6DHV5 1058 aa29.48■■■□□ 2.31
HOMER3-203ENST00000433218 LDHDQ86WU2 507 aa29.48■■■□□ 2.31
HOMER3-203ENST00000433218 ISCA1Q9BUE6 129 aa29.48■■■□□ 2.31
HOMER3-203ENST00000433218 DBF4Q9UBU7 674 aaPredicted RBP29.48■■■□□ 2.31
HOMER3-203ENST00000433218 HACL1Q9UJ83 578 aa29.48■■■□□ 2.31
HOMER3-203ENST00000433218 ATP6V0A2Q9Y487 856 aa29.48■■■□□ 2.31
HOMER3-203ENST00000433218 EPHX2P34913 555 aa29.47■■■□□ 2.31
HOMER3-203ENST00000433218 LARGE2Q8N3Y3 721 aa29.47■■■□□ 2.31
HOMER3-203ENST00000433218 PHAXQ9H814 394 aaKnown RBP29.47■■■□□ 2.31
HOMER3-203ENST00000433218 IFT57Q9NWB7 429 aa29.47■■■□□ 2.31
HOMER3-203ENST00000433218 GJA3Q9Y6H8 435 aa29.47■■■□□ 2.31
HOMER3-203ENST00000433218 RTL5Q5HYW3 569 aaPredicted RBP29.46■■■□□ 2.31
HOMER3-203ENST00000433218 GPC2Q8N158 579 aa29.46■■■□□ 2.31
HOMER3-203ENST00000433218 C8orf58Q8NAV2 365 aa29.46■■■□□ 2.31
HOMER3-203ENST00000433218 JDP2Q8WYK2 163 aa29.46■■■□□ 2.31
HOMER3-203ENST00000433218 ANP32CO43423 234 aa29.45■■■□□ 2.31
HOMER3-203ENST00000433218 ANKRD13DQ6ZTN6 518 aa29.45■■■□□ 2.31
HOMER3-203ENST00000433218 FAM89AQ96GI7 184 aa29.45■■■□□ 2.31
HOMER3-203ENST00000433218 SCN9AQ15858 1988 aa29.45■■■□□ 2.31
HOMER3-203ENST00000433218 PPIP5K2O43314 1243 aa29.45■■■□□ 2.3
HOMER3-203ENST00000433218 SCNN1DP51172 638 aa29.45■■■□□ 2.3
HOMER3-203ENST00000433218 TSPYL6Q8N831 410 aa29.43■■■□□ 2.3
HOMER3-203ENST00000433218 MKRN1Q9UHC7 482 aaKnown RBP29.43■■■□□ 2.3
HOMER3-203ENST00000433218 ITGBL1O95965 494 aaPredicted RBP29.42■■■□□ 2.3
HOMER3-203ENST00000433218 GRAPQ13588 217 aa29.42■■■□□ 2.3
HOMER3-203ENST00000433218 MAP1SQ66K74 1059 aaPredicted RBP29.42■■■□□ 2.3
HOMER3-203ENST00000433218 GRAPLQ8TC17 118 aaPredicted RBP29.42■■■□□ 2.3
HOMER3-203ENST00000433218 TSR2Q969E8 191 aaKnown RBP29.42■■■□□ 2.3
HOMER3-203ENST00000433218 HYPKQ9NX55 129 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms