RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 KCNQ4P56696 695 aa5.25□□□□□ -1.57
HMGB1P27-201ENST00000431429 AAMPQ13685 434 aa5.25□□□□□ -1.57
HMGB1P27-201ENST00000431429 ZFP42Q96MM3 310 aa5.25□□□□□ -1.57
HMGB1P27-201ENST00000431429 CSRNP1Q96S65 589 aa5.25□□□□□ -1.57
HMGB1P27-201ENST00000431429 DUSP9Q99956 384 aaKnown RBP5.25□□□□□ -1.57
HMGB1P27-201ENST00000431429 TIMMDC1Q9NPL8 285 aa5.25□□□□□ -1.57
HMGB1P27-201ENST00000431429 PARP2Q9UGN5 583 aa5.25□□□□□ -1.57
HMGB1P27-201ENST00000431429 PNMA6FA0A0J9YX94 578 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 A0A1W2PNR3 127 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 A6NHS1 94 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 NRG2O14511 850 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 EIF1AYO14602 144 aaKnown RBP5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 RHOQP17081 205 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 MAPK8P45983 427 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 ORC1Q13415 861 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 SCARF1Q14162 830 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 ALG1LQ6GMV1 187 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 PDE12Q6L8Q7 609 aaKnown RBP5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 NLRP8Q86W28 1048 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 PIK3R5Q8WYR1 880 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 AIDAQ96BJ3 306 aa5.24□□□□□ -1.57
HMGB1P27-201ENST00000431429 EFSO43281 561 aa5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 TNFRSF21O75509 655 aa5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 F11P03951 625 aa5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 VEGFBP49765 207 aa5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 LBRQ14739 615 aaKnown RBP5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 LRRC69Q6ZNQ3 347 aa5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 TMC1Q8TDI8 760 aa5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 BACH2Q9BYV9 841 aa5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 CHRDQ9H2X0 955 aa5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 HCN2Q9UL51 889 aa5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 RTCBQ9Y3I0 505 aaKnown RBP5.23□□□□□ -1.57
HMGB1P27-201ENST00000431429 SLC35F4A4IF30 521 aa5.22□□□□□ -1.57
HMGB1P27-201ENST00000431429 FAM157BP0CG42 384 aa5.22□□□□□ -1.57
HMGB1P27-201ENST00000431429 PCSK2P16519 638 aa5.22□□□□□ -1.57
HMGB1P27-201ENST00000431429 GNA15P30679 374 aa5.22□□□□□ -1.57
HMGB1P27-201ENST00000431429 BICDL1Q6ZP65 573 aa5.22□□□□□ -1.57
HMGB1P27-201ENST00000431429 FRMD6Q96NE9 622 aa5.22□□□□□ -1.57
HMGB1P27-201ENST00000431429 AAASQ9NRG9 546 aa5.22□□□□□ -1.57
HMGB1P27-201ENST00000431429 NDFIP2Q9NV92 336 aa5.22□□□□□ -1.57
HMGB1P27-201ENST00000431429 USP20Q9Y2K6 914 aa5.22□□□□□ -1.57
HMGB1P27-201ENST00000431429 FIGNL2A6NMB9 653 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 POTECB2RU33 542 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 AXIN1O15169 862 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 CPNE3O75131 537 aaKnown RBP5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 NEFLP07196 543 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 CTSHP09668 335 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 ATP2B2Q01814 1243 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 METTL16Q86W50 562 aaKnown RBP5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 SNX29Q8TEQ0 813 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 FAM161BQ96MY7 647 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 C8orf37Q96NL8 207 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 RUBCNLQ9H714 662 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 ZFYVE28Q9HCC9 887 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 ATP13A2Q9NQ11 1180 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 TMEM63CQ9P1W3 806 aa5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 FOXD3Q9UJU5 478 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P27-201ENST00000431429 SCAMP3O14828 347 aaKnown RBP5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 SORBS3O60504 671 aa5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 IGSF3O75054 1194 aa5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 HDLBPQ00341 1268 aaKnown RBP5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 RAD51AP2Q09MP3 1159 aa5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 C8orf34Q49A92 452 aa5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 ARSJQ5FYB0 599 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 USPL1Q5W0Q7 1092 aa5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 ZCCHC2Q9C0B9 1178 aaKnown RBP5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 ELP3Q9H9T3 547 aa5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 METTL5Q9NRN9 209 aaKnown RBP5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 FNDC3AQ9Y2H6 1198 aaKnown RBP5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 AK5Q9Y6K8 562 aa5.2□□□□□ -1.58
HMGB1P27-201ENST00000431429 UBAP1LF5GYI3 381 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 GFRA3O60609 400 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 HOXD8P13378 290 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 EPB42P16452 691 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 FANCCQ00597 558 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 XPCQ01831 940 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 LAMC2Q13753 1193 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 TSNAXIP1Q2TAA8 658 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 PKDCCQ504Y2 493 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 GALNT12Q8IXK2 581 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 CCDC74AQ96AQ1 378 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 GPAMQ9HCL2 828 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 BRD7Q9NPI1 651 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 DACH1Q9UI36 760 aa5.19□□□□□ -1.58
HMGB1P27-201ENST00000431429 ITGAEP38570 1179 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 PTSQ03393 145 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 TNP2Q05952 138 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 PSMD2Q13200 908 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 LAPTM4AQ15012 233 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 ZNF438Q7Z4V0 828 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 NLRP13Q86W25 1043 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 CMTR1Q8N1G2 835 aaKnown RBP5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 CEP63Q96MT8 703 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 OSBPL7Q9BZF2 842 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 GSX2Q9BZM3 304 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 CUEDC1Q9NWM3 386 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 CNTN3Q9P232 1028 aa5.18□□□□□ -1.58
HMGB1P27-201ENST00000431429 GIPC1O14908 333 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 ST8SIA5O15466 376 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms