RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 CHMP3Q9Y3E7 222 aa27.28■■□□□ 1.96
VSX1-205ENST00000429762 RABL6Q3YEC7 729 aaPredicted RBP27.27■■□□□ 1.96
VSX1-205ENST00000429762 KIF1BPQ96EK5 621 aa27.27■■□□□ 1.96
VSX1-205ENST00000429762 COL15A1P39059 1388 aa27.27■■□□□ 1.96
VSX1-205ENST00000429762 SALL3Q9BXA9 1300 aa27.26■■□□□ 1.96
VSX1-205ENST00000429762 PDE1AP54750 535 aa27.26■■□□□ 1.95
VSX1-205ENST00000429762 SYNE4Q8N205 404 aa27.26■■□□□ 1.95
VSX1-205ENST00000429762 FAM89AQ96GI7 184 aa27.26■■□□□ 1.95
VSX1-205ENST00000429762 KRT27Q7Z3Y8 459 aa27.26■■□□□ 1.95
VSX1-205ENST00000429762 NLRP10Q86W26 655 aa27.26■■□□□ 1.95
VSX1-205ENST00000429762 RFX5P48382 616 aaPredicted RBP27.25■■□□□ 1.95
VSX1-205ENST00000429762 TRIM28Q13263 835 aaKnown RBP27.25■■□□□ 1.95
VSX1-205ENST00000429762 HSP90AB4PQ58FF6 505 aa27.25■■□□□ 1.95
VSX1-205ENST00000429762 CCNL1Q9UK58 526 aaPredicted RBP27.25■■□□□ 1.95
VSX1-205ENST00000429762 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.25■■□□□ 1.95
VSX1-205ENST00000429762 ERVV-1B6SEH8 477 aa27.24■■□□□ 1.95
VSX1-205ENST00000429762 MX1P20591 662 aa27.24■■□□□ 1.95
VSX1-205ENST00000429762 HSP90AB3PQ58FF7 597 aa27.24■■□□□ 1.95
VSX1-205ENST00000429762 UBN2Q6ZU65 1347 aa27.23■■□□□ 1.95
VSX1-205ENST00000429762 LY75O60449 1722 aa27.23■■□□□ 1.95
VSX1-205ENST00000429762 CAMTA2O94983 1202 aa27.23■■□□□ 1.95
VSX1-205ENST00000429762 ZNF772Q68DY9 489 aaPredicted RBP27.23■■□□□ 1.95
VSX1-205ENST00000429762 ANP32AP39687 249 aaKnown RBP27.22■■□□□ 1.95
VSX1-205ENST00000429762 G3BP1Q13283 466 aaKnown RBP eCLIP27.22■■□□□ 1.95
VSX1-205ENST00000429762 SASH1O94885 1247 aa27.22■■□□□ 1.95
VSX1-205ENST00000429762 PCCAP05165 728 aaPredicted RBP27.22■■□□□ 1.95
VSX1-205ENST00000429762 PTPN12Q05209 780 aaKnown RBP27.21■■□□□ 1.95
VSX1-205ENST00000429762 ZBTB38Q8NAP3 1195 aaPredicted RBP27.21■■□□□ 1.95
VSX1-205ENST00000429762 EP400Q96L91 3159 aa27.21■■□□□ 1.95
VSX1-205ENST00000429762 FAM177BA6PVY3 158 aa27.2■■□□□ 1.95
VSX1-205ENST00000429762 RBM6P78332 1123 aaKnown RBP27.2■■□□□ 1.95
VSX1-205ENST00000429762 CCDC85AQ96PX6 553 aaPredicted RBP27.2■■□□□ 1.95
VSX1-205ENST00000429762 BCL11BQ9C0K0 894 aaPredicted RBP27.2■■□□□ 1.95
VSX1-205ENST00000429762 CNTNAP4Q9C0A0 1308 aa27.2■■□□□ 1.95
VSX1-205ENST00000429762 MFAP1P55081 439 aaKnown RBP27.2■■□□□ 1.94
VSX1-205ENST00000429762 ZNF34Q8IZ26 560 aa27.2■■□□□ 1.94
VSX1-205ENST00000429762 OSBPL3Q9H4L5 887 aa27.2■■□□□ 1.94
VSX1-205ENST00000429762 SDSP20132 328 aa27.19■■□□□ 1.94
VSX1-205ENST00000429762 TAF1LQ8IZX4 1826 aa27.19■■□□□ 1.94
VSX1-205ENST00000429762 TRIM37O94972 964 aa27.18■■□□□ 1.94
VSX1-205ENST00000429762 ERC1Q8IUD2 1116 aa27.18■■□□□ 1.94
VSX1-205ENST00000429762 COPRSQ9NQ92 184 aa27.18■■□□□ 1.94
VSX1-205ENST00000429762 BCORQ6W2J9 1755 aa27.18■■□□□ 1.94
VSX1-205ENST00000429762 FAM196AQ6ZSG2 479 aa27.18■■□□□ 1.94
VSX1-205ENST00000429762 TBC1D9Q6ZT07 1266 aa27.18■■□□□ 1.94
VSX1-205ENST00000429762 TRMT112Q9UI30 125 aaKnown RBP27.18■■□□□ 1.94
VSX1-205ENST00000429762 TUBGCP6Q96RT7 1819 aa27.17■■□□□ 1.94
VSX1-205ENST00000429762 AMIGO3Q86WK7 504 aa27.17■■□□□ 1.94
VSX1-205ENST00000429762 ZNF594Q96JF6 807 aaPredicted RBP27.17■■□□□ 1.94
VSX1-205ENST00000429762 STAP2Q9UGK3 403 aa27.17■■□□□ 1.94
VSX1-205ENST00000429762 GNPATO15228 680 aa27.16■■□□□ 1.94
VSX1-205ENST00000429762 SUSD4Q5VX71 490 aa27.16■■□□□ 1.94
VSX1-205ENST00000429762 CLASRPQ8N2M8 674 aaKnown RBP27.16■■□□□ 1.94
VSX1-205ENST00000429762 CDC45O75419 566 aa27.15■■□□□ 1.94
VSX1-205ENST00000429762 AACSQ86V21 672 aa27.15■■□□□ 1.94
VSX1-205ENST00000429762 LRRC4BQ9NT99 713 aa27.14■■□□□ 1.94
VSX1-205ENST00000429762 CDHR2Q9BYE9 1310 aa27.13■■□□□ 1.93
VSX1-205ENST00000429762 IRS4O14654 1257 aaPredicted RBP27.13■■□□□ 1.93
VSX1-205ENST00000429762 CCDC8Q9H0W5 538 aaPredicted RBP27.13■■□□□ 1.93
VSX1-205ENST00000429762 NIP7Q9Y221 180 aaKnown RBP eCLIP27.13■■□□□ 1.93
VSX1-205ENST00000429762 MAP4K4O95819 1239 aaPredicted RBP27.13■■□□□ 1.93
VSX1-205ENST00000429762 EAF2Q96CJ1 260 aaPredicted RBP27.13■■□□□ 1.93
VSX1-205ENST00000429762 TLR7Q9NYK1 1049 aaKnown RBP27.13■■□□□ 1.93
VSX1-205ENST00000429762 C4BP0C0L5 1744 aa27.13■■□□□ 1.93
VSX1-205ENST00000429762 TFCP2Q12800 502 aa27.12■■□□□ 1.93
VSX1-205ENST00000429762 RC3H1Q5TC82 1133 aaKnown RBP27.12■■□□□ 1.93
VSX1-205ENST00000429762 PLA2G12BQ9BX93 195 aa27.12■■□□□ 1.93
VSX1-205ENST00000429762 SRP68Q9UHB9 627 aaKnown RBP27.12■■□□□ 1.93
VSX1-205ENST00000429762 RPS6KA4O75676 772 aa27.11■■□□□ 1.93
VSX1-205ENST00000429762 IFIT2P09913 472 aaKnown RBP27.11■■□□□ 1.93
VSX1-205ENST00000429762 PI4K2BQ8TCG2 481 aa27.11■■□□□ 1.93
VSX1-205ENST00000429762 TRIM6-TRIM34B2RNG4 842 aa27.1■■□□□ 1.93
VSX1-205ENST00000429762 UPF2Q9HAU5 1272 aaKnown RBP27.1■■□□□ 1.93
VSX1-205ENST00000429762 SCN7AQ01118 1682 aa27.1■■□□□ 1.93
VSX1-205ENST00000429762 PHF14O94880 888 aa27.09■■□□□ 1.93
VSX1-205ENST00000429762 RXRBP28702 533 aa27.09■■□□□ 1.93
VSX1-205ENST00000429762 LRRC24Q50LG9 513 aa27.09■■□□□ 1.93
VSX1-205ENST00000429762 RILPL2Q969X0 211 aa27.09■■□□□ 1.93
VSX1-205ENST00000429762 PUS3Q9BZE2 481 aaKnown RBP27.09■■□□□ 1.93
VSX1-205ENST00000429762 MYH3P11055 1940 aa27.09■■□□□ 1.93
VSX1-205ENST00000429762 AOX1Q06278 1338 aa27.09■■□□□ 1.93
VSX1-205ENST00000429762 USPL1Q5W0Q7 1092 aa27.09■■□□□ 1.93
VSX1-205ENST00000429762 BICDL1Q6ZP65 573 aa27.09■■□□□ 1.93
VSX1-205ENST00000429762 UTP14AQ9BVJ6 771 aaKnown RBP27.09■■□□□ 1.93
VSX1-205ENST00000429762 RGS17Q9UGC6 210 aaPredicted RBP27.09■■□□□ 1.93
VSX1-205ENST00000429762 MSH5O43196 834 aa27.08■■□□□ 1.93
VSX1-205ENST00000429762 CSF1RP07333 972 aa27.08■■□□□ 1.93
VSX1-205ENST00000429762 HCLS1P14317 486 aaPredicted RBP27.08■■□□□ 1.93
VSX1-205ENST00000429762 CTSWP56202 376 aa27.08■■□□□ 1.93
VSX1-205ENST00000429762 ATG9AQ7Z3C6 839 aa27.08■■□□□ 1.93
VSX1-205ENST00000429762 ZNF652Q9Y2D9 606 aa27.08■■□□□ 1.93
VSX1-205ENST00000429762 CCDC57Q2TAC2 916 aa27.08■■□□□ 1.92
VSX1-205ENST00000429762 GREM2Q9H772 168 aa27.08■■□□□ 1.92
VSX1-205ENST00000429762 BCL2L12Q9HB09 334 aa27.08■■□□□ 1.92
VSX1-205ENST00000429762 RTCBQ9Y3I0 505 aaKnown RBP27.08■■□□□ 1.92
VSX1-205ENST00000429762 TTLL11Q8NHH1 800 aa27.07■■□□□ 1.92
VSX1-205ENST00000429762 TBC1D32Q96NH3 1257 aa27.07■■□□□ 1.92
VSX1-205ENST00000429762 PARP10Q53GL7 1025 aa27.06■■□□□ 1.92
VSX1-205ENST00000429762 IPO9Q96P70 1041 aaKnown RBP27.06■■□□□ 1.92
VSX1-205ENST00000429762 SH3TC1Q8TE82 1336 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms