RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 HSP90AB3PQ58FF7 597 aa13.6□□□□□ -0.23
CRIM1-204ENST00000428774 COL23A1Q86Y22 540 aaPredicted RBP13.6□□□□□ -0.23
CRIM1-204ENST00000428774 SUCLG2Q96I99 432 aa13.6□□□□□ -0.23
CRIM1-204ENST00000428774 CWC25Q9NXE8 425 aaPredicted RBP13.6□□□□□ -0.23
CRIM1-204ENST00000428774 C9orf78Q9NZ63 289 aaPredicted RBP13.6□□□□□ -0.23
CRIM1-204ENST00000428774 TFCP2L1Q9NZI6 479 aa13.6□□□□□ -0.23
CRIM1-204ENST00000428774 RTCBQ9Y3I0 505 aaKnown RBP13.6□□□□□ -0.23
CRIM1-204ENST00000428774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.59□□□□□ -0.23
CRIM1-204ENST00000428774 GPTP24298 496 aa13.59□□□□□ -0.23
CRIM1-204ENST00000428774 BCL2L12Q9HB09 334 aa13.59□□□□□ -0.23
CRIM1-204ENST00000428774 SRP68Q9UHB9 627 aaKnown RBP13.59□□□□□ -0.23
CRIM1-204ENST00000428774 TNRC6CQ9HCJ0 1690 aaKnown RBP13.59□□□□□ -0.23
CRIM1-204ENST00000428774 USP42Q9H9J4 1324 aaKnown RBP13.59□□□□□ -0.23
CRIM1-204ENST00000428774 TRIM28Q13263 835 aaKnown RBP13.58□□□□□ -0.24
CRIM1-204ENST00000428774 UBE3BQ7Z3V4 1068 aa13.58□□□□□ -0.24
CRIM1-204ENST00000428774 NLRP10Q86W26 655 aa13.58□□□□□ -0.24
CRIM1-204ENST00000428774 ZNF34Q8IZ26 560 aa13.58□□□□□ -0.24
CRIM1-204ENST00000428774 CCDC191Q8NCU4 936 aa13.58□□□□□ -0.24
CRIM1-204ENST00000428774 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
CRIM1-204ENST00000428774 KAZALD1Q96I82 304 aa13.58□□□□□ -0.24
CRIM1-204ENST00000428774 RWDD1Q9H446 243 aaPredicted RBP13.58□□□□□ -0.24
CRIM1-204ENST00000428774 NARFQ9UHQ1 456 aa13.58□□□□□ -0.24
CRIM1-204ENST00000428774 SPEF2Q9C093 1822 aa13.57□□□□□ -0.24
CRIM1-204ENST00000428774 LRP5O75197 1615 aa13.57□□□□□ -0.24
CRIM1-204ENST00000428774 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
CRIM1-204ENST00000428774 H7C1W4 665 aa13.57□□□□□ -0.24
CRIM1-204ENST00000428774 USPL1Q5W0Q7 1092 aa13.57□□□□□ -0.24
CRIM1-204ENST00000428774 RPAP2Q8IXW5 612 aaPredicted RBP13.57□□□□□ -0.24
CRIM1-204ENST00000428774 ARHGEF1Q92888 912 aaKnown RBP13.57□□□□□ -0.24
CRIM1-204ENST00000428774 RGL2O15211 777 aa13.56□□□□□ -0.24
CRIM1-204ENST00000428774 MSH5O43196 834 aa13.56□□□□□ -0.24
CRIM1-204ENST00000428774 ADRA2BP18089 450 aa13.56□□□□□ -0.24
CRIM1-204ENST00000428774 SSFA2P28290 1259 aa13.56□□□□□ -0.24
CRIM1-204ENST00000428774 MTX1Q13505 466 aa13.56□□□□□ -0.24
CRIM1-204ENST00000428774 EPHA10Q5JZY3 1008 aa13.56□□□□□ -0.24
CRIM1-204ENST00000428774 SMC5Q8IY18 1101 aa13.56□□□□□ -0.24
CRIM1-204ENST00000428774 BICC1Q9H694 974 aaKnown RBP13.56□□□□□ -0.24
CRIM1-204ENST00000428774 ZNF652Q9Y2D9 606 aa13.56□□□□□ -0.24
CRIM1-204ENST00000428774 NRXN2Q9P2S2 1712 aa13.56□□□□□ -0.24
CRIM1-204ENST00000428774 PCCAP05165 728 aaPredicted RBP13.55□□□□□ -0.24
CRIM1-204ENST00000428774 ATP8B2P98198 1209 aa13.55□□□□□ -0.24
CRIM1-204ENST00000428774 POLA2Q14181 598 aa13.55□□□□□ -0.24
CRIM1-204ENST00000428774 RTL5Q5HYW3 569 aaPredicted RBP13.55□□□□□ -0.24
CRIM1-204ENST00000428774 MSL1Q68DK7 614 aa13.55□□□□□ -0.24
CRIM1-204ENST00000428774 SKAP1Q86WV1 359 aa13.55□□□□□ -0.24
CRIM1-204ENST00000428774 CDHR2Q9BYE9 1310 aa13.55□□□□□ -0.24
CRIM1-204ENST00000428774 A0A1B0GUL6 1792 aa13.55□□□□□ -0.24
CRIM1-204ENST00000428774 ZBTB7AO95365 584 aa13.54□□□□□ -0.24
CRIM1-204ENST00000428774 NTSR2O95665 410 aa13.54□□□□□ -0.24
CRIM1-204ENST00000428774 TRAPPC3LQ5T215 181 aa13.54□□□□□ -0.24
CRIM1-204ENST00000428774 SUSD4Q5VX71 490 aa13.54□□□□□ -0.24
CRIM1-204ENST00000428774 TBC1D9BQ66K14 1250 aa13.54□□□□□ -0.24
CRIM1-204ENST00000428774 CLEC4GQ6UXB4 293 aa13.54□□□□□ -0.24
CRIM1-204ENST00000428774 PPP1R42Q7Z4L9 355 aa13.54□□□□□ -0.24
CRIM1-204ENST00000428774 NIP7Q9Y221 180 aaKnown RBP eCLIP13.54□□□□□ -0.24
CRIM1-204ENST00000428774 ZPR1O75312 459 aa13.53□□□□□ -0.24
CRIM1-204ENST00000428774 HMMRO75330 724 aa13.53□□□□□ -0.24
CRIM1-204ENST00000428774 RFC4P35249 363 aa13.53□□□□□ -0.24
CRIM1-204ENST00000428774 RABL6Q3YEC7 729 aaPredicted RBP13.53□□□□□ -0.24
CRIM1-204ENST00000428774 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
CRIM1-204ENST00000428774 ZBTB38Q8NAP3 1195 aaPredicted RBP13.53□□□□□ -0.24
CRIM1-204ENST00000428774 SSH3Q8TE77 659 aa13.53□□□□□ -0.24
CRIM1-204ENST00000428774 HDAC5Q9UQL6 1122 aa13.53□□□□□ -0.24
CRIM1-204ENST00000428774 COL4A1P02462 1669 aa13.53□□□□□ -0.24
CRIM1-204ENST00000428774 SRGAP3O43295 1099 aa13.52□□□□□ -0.25
CRIM1-204ENST00000428774 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
CRIM1-204ENST00000428774 FOXO4P98177 505 aa13.52□□□□□ -0.25
CRIM1-204ENST00000428774 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
CRIM1-204ENST00000428774 FAM89AQ96GI7 184 aa13.52□□□□□ -0.25
CRIM1-204ENST00000428774 DCTPP1Q9H773 170 aa13.52□□□□□ -0.25
CRIM1-204ENST00000428774 PDZRN3Q9UPQ7 1066 aa13.52□□□□□ -0.25
CRIM1-204ENST00000428774 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
CRIM1-204ENST00000428774 ABCC12Q96J65 1359 aa13.52□□□□□ -0.25
CRIM1-204ENST00000428774 ANKRD31Q8N7Z5 1873 aa13.52□□□□□ -0.25
CRIM1-204ENST00000428774 FAM177BA6PVY3 158 aa13.51□□□□□ -0.25
CRIM1-204ENST00000428774 GYS1P13807 737 aa13.51□□□□□ -0.25
CRIM1-204ENST00000428774 BICDL1Q6ZP65 573 aa13.51□□□□□ -0.25
CRIM1-204ENST00000428774 GCC1Q96CN9 775 aa13.51□□□□□ -0.25
CRIM1-204ENST00000428774 PLA2G12BQ9BX93 195 aa13.51□□□□□ -0.25
CRIM1-204ENST00000428774 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
CRIM1-204ENST00000428774 CARMIL3Q8ND23 1372 aa13.5□□□□□ -0.25
CRIM1-204ENST00000428774 SH3TC1Q8TE82 1336 aa13.5□□□□□ -0.25
CRIM1-204ENST00000428774 UTP14AQ9BVJ6 771 aaKnown RBP13.5□□□□□ -0.25
CRIM1-204ENST00000428774 EXOC6BQ9Y2D4 811 aa13.5□□□□□ -0.25
CRIM1-204ENST00000428774 IRS4O14654 1257 aaPredicted RBP13.49□□□□□ -0.25
CRIM1-204ENST00000428774 RFX5P48382 616 aaPredicted RBP13.49□□□□□ -0.25
CRIM1-204ENST00000428774 NFIXQ14938 502 aa13.49□□□□□ -0.25
CRIM1-204ENST00000428774 LMBR1LQ6UX01 489 aa13.49□□□□□ -0.25
CRIM1-204ENST00000428774 NUTM1Q86Y26 1132 aa13.49□□□□□ -0.25
CRIM1-204ENST00000428774 FLAD1Q8NFF5 587 aa13.49□□□□□ -0.25
CRIM1-204ENST00000428774 COL11A2P13942 1736 aaPredicted RBP13.49□□□□□ -0.25
CRIM1-204ENST00000428774 TAF1P21675 1872 aa13.48□□□□□ -0.25
CRIM1-204ENST00000428774 RIC1Q4ADV7 1423 aa13.48□□□□□ -0.25
CRIM1-204ENST00000428774 PDE4AP27815 886 aa13.48□□□□□ -0.25
CRIM1-204ENST00000428774 CTSWP56202 376 aa13.48□□□□□ -0.25
CRIM1-204ENST00000428774 NUCB1Q02818 461 aa13.48□□□□□ -0.25
CRIM1-204ENST00000428774 PA2G4Q9UQ80 394 aaKnown RBP13.48□□□□□ -0.25
CRIM1-204ENST00000428774 ARAP2Q8WZ64 1704 aa13.47□□□□□ -0.25
CRIM1-204ENST00000428774 PDE8AO60658 829 aa13.47□□□□□ -0.25
CRIM1-204ENST00000428774 DDR1Q08345 913 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms