RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 LMNB1P20700 586 aa17■□□□□ 0.31
PHF1-205ENST00000428274 TCIRG1Q13488 830 aa17■□□□□ 0.31
PHF1-205ENST00000428274 HSP90AB3PQ58FF7 597 aa17■□□□□ 0.31
PHF1-205ENST00000428274 PPP1R42Q7Z4L9 355 aa17■□□□□ 0.31
PHF1-205ENST00000428274 RRAGCQ9HB90 399 aa17■□□□□ 0.31
PHF1-205ENST00000428274 TOMM70O94826 608 aa16.99■□□□□ 0.31
PHF1-205ENST00000428274 SLC10A5Q5PT55 438 aa16.99■□□□□ 0.31
PHF1-205ENST00000428274 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
PHF1-205ENST00000428274 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
PHF1-205ENST00000428274 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
PHF1-205ENST00000428274 HOXA10P31260 410 aaPredicted RBP16.98■□□□□ 0.31
PHF1-205ENST00000428274 OLFM4Q6UX06 510 aa16.98■□□□□ 0.31
PHF1-205ENST00000428274 NLRP10Q86W26 655 aa16.98■□□□□ 0.31
PHF1-205ENST00000428274 TSPYL6Q8N831 410 aa16.98■□□□□ 0.31
PHF1-205ENST00000428274 UTP14AQ9BVJ6 771 aaKnown RBP16.98■□□□□ 0.31
PHF1-205ENST00000428274 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
PHF1-205ENST00000428274 LTBP3Q9NS15 1303 aa16.97■□□□□ 0.31
PHF1-205ENST00000428274 ALDH1B1P30837 517 aa16.97■□□□□ 0.31
PHF1-205ENST00000428274 SOGA3Q5TF21 947 aa16.97■□□□□ 0.31
PHF1-205ENST00000428274 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
PHF1-205ENST00000428274 FAM9BQ8IZU0 186 aa16.97■□□□□ 0.31
PHF1-205ENST00000428274 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
PHF1-205ENST00000428274 ZC3H4Q9UPT8 1303 aaKnown RBP16.96■□□□□ 0.31
PHF1-205ENST00000428274 C3orf67Q6ZVT6 689 aa16.96■□□□□ 0.31
PHF1-205ENST00000428274 SLC51AQ86UW1 340 aa16.96■□□□□ 0.31
PHF1-205ENST00000428274 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
PHF1-205ENST00000428274 CACNA1FO60840 1977 aa16.96■□□□□ 0.31
PHF1-205ENST00000428274 POTECB2RU33 542 aa16.95■□□□□ 0.3
PHF1-205ENST00000428274 HTRA3P83110 453 aa16.95■□□□□ 0.3
PHF1-205ENST00000428274 CCDC30Q5VVM6 783 aa16.95■□□□□ 0.3
PHF1-205ENST00000428274 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
PHF1-205ENST00000428274 LAMB2P55268 1798 aa16.94■□□□□ 0.3
PHF1-205ENST00000428274 TRIM28Q13263 835 aaKnown RBP16.94■□□□□ 0.3
PHF1-205ENST00000428274 SYNE4Q8N205 404 aa16.94■□□□□ 0.3
PHF1-205ENST00000428274 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
PHF1-205ENST00000428274 TAOK3Q9H2K8 898 aa16.94■□□□□ 0.3
PHF1-205ENST00000428274 SALL2Q9Y467 1007 aaPredicted RBP16.94■□□□□ 0.3
PHF1-205ENST00000428274 KDM2BQ8NHM5 1336 aa16.94■□□□□ 0.3
PHF1-205ENST00000428274 TIAM2Q8IVF5 1701 aa16.93■□□□□ 0.3
PHF1-205ENST00000428274 GLTPD2A6NH11 291 aa16.93■□□□□ 0.3
PHF1-205ENST00000428274 CCDC93Q567U6 631 aa16.93■□□□□ 0.3
PHF1-205ENST00000428274 DNAJC5GQ8N7S2 189 aa16.93■□□□□ 0.3
PHF1-205ENST00000428274 RBM46Q8TBY0 533 aaKnown RBP16.93■□□□□ 0.3
PHF1-205ENST00000428274 RPGRQ92834 1020 aaKnown RBP16.93■□□□□ 0.3
PHF1-205ENST00000428274 NLRP3Q96P20 1036 aa16.93■□□□□ 0.3
PHF1-205ENST00000428274 TRMT112Q9UI30 125 aaKnown RBP16.93■□□□□ 0.3
PHF1-205ENST00000428274 SNED1Q8TER0 1413 aa16.93■□□□□ 0.3
PHF1-205ENST00000428274 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
PHF1-205ENST00000428274 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
PHF1-205ENST00000428274 TWISTNBQ3B726 338 aaPredicted RBP16.92■□□□□ 0.3
PHF1-205ENST00000428274 DDX60Q8IY21 1712 aaKnown RBP16.91■□□□□ 0.3
PHF1-205ENST00000428274 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
PHF1-205ENST00000428274 HCLS1P14317 486 aaPredicted RBP16.91■□□□□ 0.3
PHF1-205ENST00000428274 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
PHF1-205ENST00000428274 RIC3Q7Z5B4 369 aa16.91■□□□□ 0.3
PHF1-205ENST00000428274 RTKN2Q8IZC4 609 aa16.91■□□□□ 0.3
PHF1-205ENST00000428274 RBM17Q96I25 401 aaKnown RBP16.91■□□□□ 0.3
PHF1-205ENST00000428274 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
PHF1-205ENST00000428274 FKBP4Q02790 459 aaKnown RBP eCLIP16.9■□□□□ 0.3
PHF1-205ENST00000428274 CC2D2BQ6DHV5 1058 aa16.9■□□□□ 0.3
PHF1-205ENST00000428274 TAF1P21675 1872 aa16.9■□□□□ 0.3
PHF1-205ENST00000428274 C16orf71Q8IYS4 520 aaPredicted RBP16.89■□□□□ 0.29
PHF1-205ENST00000428274 ZNF521Q96K83 1311 aa16.89■□□□□ 0.29
PHF1-205ENST00000428274 VAMP4O75379 141 aa16.88■□□□□ 0.29
PHF1-205ENST00000428274 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
PHF1-205ENST00000428274 APLP1P51693 650 aa16.88■□□□□ 0.29
PHF1-205ENST00000428274 ZNF428Q96B54 188 aa16.88■□□□□ 0.29
PHF1-205ENST00000428274 FAM89AQ96GI7 184 aa16.88■□□□□ 0.29
PHF1-205ENST00000428274 PSMD1Q99460 953 aa16.88■□□□□ 0.29
PHF1-205ENST00000428274 METTL22Q9BUU2 404 aaPredicted RBP16.88■□□□□ 0.29
PHF1-205ENST00000428274 STK31Q9BXU1 1019 aa16.88■□□□□ 0.29
PHF1-205ENST00000428274 TCERG1O14776 1098 aaKnown RBP16.87■□□□□ 0.29
PHF1-205ENST00000428274 DDX58O95786 925 aaKnown RBP16.87■□□□□ 0.29
PHF1-205ENST00000428274 VEGFAP15692 232 aaPredicted RBP16.87■□□□□ 0.29
PHF1-205ENST00000428274 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
PHF1-205ENST00000428274 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
PHF1-205ENST00000428274 KSR2Q6VAB6 950 aa16.87■□□□□ 0.29
PHF1-205ENST00000428274 G2E3Q7L622 706 aa16.87■□□□□ 0.29
PHF1-205ENST00000428274 ZNF277Q9NRM2 450 aaPredicted RBP16.87■□□□□ 0.29
PHF1-205ENST00000428274 ABCC4O15439 1325 aa16.87■□□□□ 0.29
PHF1-205ENST00000428274 PI4KAP2A4QPH2 592 aa16.86■□□□□ 0.29
PHF1-205ENST00000428274 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
PHF1-205ENST00000428274 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
PHF1-205ENST00000428274 FSTL1Q12841 308 aa16.86■□□□□ 0.29
PHF1-205ENST00000428274 SF3B3Q15393 1217 aaKnown RBP16.86■□□□□ 0.29
PHF1-205ENST00000428274 PI4KAP1Q8N8J0 262 aa16.86■□□□□ 0.29
PHF1-205ENST00000428274 CCDC191Q8NCU4 936 aa16.86■□□□□ 0.29
PHF1-205ENST00000428274 MYD88Q99836 296 aa16.86■□□□□ 0.29
PHF1-205ENST00000428274 MAP3K2Q9Y2U5 619 aa16.86■□□□□ 0.29
PHF1-205ENST00000428274 WDR90Q96KV7 1748 aa16.85■□□□□ 0.29
PHF1-205ENST00000428274 CCER2I3L3R5 266 aa16.85■□□□□ 0.29
PHF1-205ENST00000428274 BBOX1O75936 387 aa16.85■□□□□ 0.29
PHF1-205ENST00000428274 POTEIP0CG38 1075 aa16.85■□□□□ 0.29
PHF1-205ENST00000428274 POTEJP0CG39 1038 aa16.85■□□□□ 0.29
PHF1-205ENST00000428274 DPY19L2Q6NUT2 758 aa16.85■□□□□ 0.29
PHF1-205ENST00000428274 ZBTB38Q8NAP3 1195 aaPredicted RBP16.85■□□□□ 0.29
PHF1-205ENST00000428274 MYH16Q9H6N6 1097 aa16.85■□□□□ 0.29
PHF1-205ENST00000428274 ATP6V0A2Q9Y487 856 aa16.85■□□□□ 0.29
PHF1-205ENST00000428274 IRS4O14654 1257 aaPredicted RBP16.84■□□□□ 0.29
PHF1-205ENST00000428274 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms