RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 RASSF7Q02833 373 aa22.1■■□□□ 1.13
LIMS2-211ENST00000426981 SKAP1Q86WV1 359 aa22.1■■□□□ 1.13
LIMS2-211ENST00000426981 TTLL6Q8N841 843 aa22.1■■□□□ 1.13
LIMS2-211ENST00000426981 IL27Q8NEV9 243 aa22.1■■□□□ 1.13
LIMS2-211ENST00000426981 IL16Q14005 1332 aa22.09■■□□□ 1.13
LIMS2-211ENST00000426981 ZNF219Q9P2Y4 722 aaPredicted RBP22.09■■□□□ 1.13
LIMS2-211ENST00000426981 GPTP24298 496 aa22.08■■□□□ 1.13
LIMS2-211ENST00000426981 PDE6BP35913 854 aa22.08■■□□□ 1.13
LIMS2-211ENST00000426981 PRELPP51888 382 aa22.08■■□□□ 1.13
LIMS2-211ENST00000426981 ST5P78524 1137 aa22.08■■□□□ 1.13
LIMS2-211ENST00000426981 C9orf131Q5VYM1 1079 aa22.08■■□□□ 1.13
LIMS2-211ENST00000426981 FAM43AQ8N2R8 423 aa22.08■■□□□ 1.13
LIMS2-211ENST00000426981 TBC1D32Q96NH3 1257 aa22.08■■□□□ 1.13
LIMS2-211ENST00000426981 MBIPQ9NS73 344 aa22.08■■□□□ 1.13
LIMS2-211ENST00000426981 COG6Q9Y2V7 657 aa22.08■■□□□ 1.13
LIMS2-211ENST00000426981 CACNA1SQ13698 1873 aa22.08■■□□□ 1.13
LIMS2-211ENST00000426981 SBF1O95248 1867 aa22.07■■□□□ 1.12
LIMS2-211ENST00000426981 ERVV-1B6SEH8 477 aa22.07■■□□□ 1.12
LIMS2-211ENST00000426981 EIF5BO60841 1220 aaKnown RBP22.07■■□□□ 1.12
LIMS2-211ENST00000426981 KIF6Q6ZMV9 814 aa22.07■■□□□ 1.12
LIMS2-211ENST00000426981 UBN2Q6ZU65 1347 aa22.07■■□□□ 1.12
LIMS2-211ENST00000426981 ZKSCAN2Q63HK3 967 aa22.06■■□□□ 1.12
LIMS2-211ENST00000426981 NUTM1Q86Y26 1132 aa22.06■■□□□ 1.12
LIMS2-211ENST00000426981 CFAP44Q96MT7 982 aa22.06■■□□□ 1.12
LIMS2-211ENST00000426981 SLX4Q8IY92 1834 aa22.06■■□□□ 1.12
LIMS2-211ENST00000426981 ERBB4Q15303 1308 aa22.06■■□□□ 1.12
LIMS2-211ENST00000426981 FRAT2O75474 233 aaPredicted RBP22.06■■□□□ 1.12
LIMS2-211ENST00000426981 ZNF853P0CG23 659 aa22.06■■□□□ 1.12
LIMS2-211ENST00000426981 SLC4A3P48751 1232 aa22.06■■□□□ 1.12
LIMS2-211ENST00000426981 RGL2O15211 777 aa22.05■■□□□ 1.12
LIMS2-211ENST00000426981 SRGNP10124 158 aa22.05■■□□□ 1.12
LIMS2-211ENST00000426981 AIMP1Q12904 312 aaKnown RBP22.05■■□□□ 1.12
LIMS2-211ENST00000426981 MVPQ14764 893 aaKnown RBP22.05■■□□□ 1.12
LIMS2-211ENST00000426981 CHMP4BQ9H444 224 aaKnown RBP22.05■■□□□ 1.12
LIMS2-211ENST00000426981 GPBP1L1Q9HC44 474 aaPredicted RBP22.05■■□□□ 1.12
LIMS2-211ENST00000426981 C21orf2O43822 256 aa22.04■■□□□ 1.12
LIMS2-211ENST00000426981 C1QTNF8P60827 252 aa22.04■■□□□ 1.12
LIMS2-211ENST00000426981 SUSD4Q5VX71 490 aa22.04■■□□□ 1.12
LIMS2-211ENST00000426981 TPTE2Q6XPS3 522 aa22.04■■□□□ 1.12
LIMS2-211ENST00000426981 COPS6Q7L5N1 327 aa22.04■■□□□ 1.12
LIMS2-211ENST00000426981 PANK1Q8TE04 598 aa22.04■■□□□ 1.12
LIMS2-211ENST00000426981 XAGE3Q8WTP9 111 aa22.04■■□□□ 1.12
LIMS2-211ENST00000426981 RNF181Q9P0P0 153 aa22.04■■□□□ 1.12
LIMS2-211ENST00000426981 CHPF2Q9P2E5 772 aa22.04■■□□□ 1.12
LIMS2-211ENST00000426981 ABCC12Q96J65 1359 aa22.04■■□□□ 1.12
LIMS2-211ENST00000426981 TNRC6CQ9HCJ0 1690 aaKnown RBP22.03■■□□□ 1.12
LIMS2-211ENST00000426981 HDAC1Q13547 482 aaPredicted RBP22.03■■□□□ 1.12
LIMS2-211ENST00000426981 GIGYF2Q6Y7W6 1299 aaKnown RBP22.03■■□□□ 1.12
LIMS2-211ENST00000426981 CCDC88AQ3V6T2 1871 aa22.02■■□□□ 1.12
LIMS2-211ENST00000426981 NFKBIEO00221 500 aa22.02■■□□□ 1.12
LIMS2-211ENST00000426981 ELL2O00472 640 aaPredicted RBP22.02■■□□□ 1.12
LIMS2-211ENST00000426981 ERFEQ4G0M1 354 aa22.02■■□□□ 1.12
LIMS2-211ENST00000426981 ZNF34Q8IZ26 560 aa22.02■■□□□ 1.12
LIMS2-211ENST00000426981 ZNF428Q96B54 188 aa22.02■■□□□ 1.12
LIMS2-211ENST00000426981 HDGFL1Q5TGJ6 251 aa22.01■■□□□ 1.11
LIMS2-211ENST00000426981 DDX21Q9NR30 783 aaKnown RBP eCLIP22.01■■□□□ 1.11
LIMS2-211ENST00000426981 ISY1Q9ULR0 285 aaKnown RBP22.01■■□□□ 1.11
LIMS2-211ENST00000426981 DDX19BQ9UMR2 479 aa22.01■■□□□ 1.11
LIMS2-211ENST00000426981 GTF2E1P29083 439 aaPredicted RBP22■■□□□ 1.11
LIMS2-211ENST00000426981 STYK1Q6J9G0 422 aa22■■□□□ 1.11
LIMS2-211ENST00000426981 PRPF40BQ6NWY9 871 aaKnown RBP22■■□□□ 1.11
LIMS2-211ENST00000426981 MASTLQ96GX5 879 aa22■■□□□ 1.11
LIMS2-211ENST00000426981 IFT57Q9NWB7 429 aa22■■□□□ 1.11
LIMS2-211ENST00000426981 PDZRN3Q9UPQ7 1066 aa22■■□□□ 1.11
LIMS2-211ENST00000426981 KLRG2A4D1S0 409 aaPredicted RBP21.99■■□□□ 1.11
LIMS2-211ENST00000426981 DZIP1LQ8IYY4 767 aaKnown RBP21.99■■□□□ 1.11
LIMS2-211ENST00000426981 PTMSP20962 102 aa21.98■■□□□ 1.11
LIMS2-211ENST00000426981 OLFM4Q6UX06 510 aa21.98■■□□□ 1.11
LIMS2-211ENST00000426981 FTSJ3Q8IY81 847 aaKnown RBP21.98■■□□□ 1.11
LIMS2-211ENST00000426981 C8orf58Q8NAV2 365 aa21.98■■□□□ 1.11
LIMS2-211ENST00000426981 CNKSR1Q969H4 720 aa21.98■■□□□ 1.11
LIMS2-211ENST00000426981 ANTXR1Q9H6X2 564 aa21.98■■□□□ 1.11
LIMS2-211ENST00000426981 KIF3CO14782 793 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 IPO8O15397 1037 aaKnown RBP21.97■■□□□ 1.11
LIMS2-211ENST00000426981 NTSR2O95665 410 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 GNAI1P63096 354 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 C3orf67Q6ZVT6 689 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 SLC51AQ86UW1 340 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 NMRK2Q9NPI5 230 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 FER1L6Q2WGJ9 1857 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 ARFGEF2Q9Y6D5 1785 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 NPR1P16066 1061 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 SYNE4Q8N205 404 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 TSR2Q969E8 191 aaKnown RBP21.97■■□□□ 1.11
LIMS2-211ENST00000426981 NYXQ9GZU5 481 aa21.97■■□□□ 1.11
LIMS2-211ENST00000426981 HOXB7P09629 217 aa21.96■■□□□ 1.11
LIMS2-211ENST00000426981 TSPYL6Q8N831 410 aa21.96■■□□□ 1.11
LIMS2-211ENST00000426981 C7orf43Q8WVR3 580 aa21.96■■□□□ 1.11
LIMS2-211ENST00000426981 BRPF3Q9ULD4 1205 aa21.96■■□□□ 1.11
LIMS2-211ENST00000426981 PCDHB15Q9Y5E8 787 aa21.96■■□□□ 1.11
LIMS2-211ENST00000426981 KIF16BQ96L93 1317 aa21.95■■□□□ 1.11
LIMS2-211ENST00000426981 LMNB1P20700 586 aa21.95■■□□□ 1.1
LIMS2-211ENST00000426981 ANKRD36CQ5JPF3 1778 aa21.94■■□□□ 1.1
LIMS2-211ENST00000426981 CALD1Q05682 793 aaKnown RBP21.94■■□□□ 1.1
LIMS2-211ENST00000426981 CHMP5Q9NZZ3 219 aa21.94■■□□□ 1.1
LIMS2-211ENST00000426981 PHAXQ9H814 394 aaKnown RBP21.93■■□□□ 1.1
LIMS2-211ENST00000426981 DBF4Q9UBU7 674 aaPredicted RBP21.93■■□□□ 1.1
LIMS2-211ENST00000426981 TCIRG1Q13488 830 aa21.92■■□□□ 1.1
LIMS2-211ENST00000426981 ALDH1L2Q3SY69 923 aa21.92■■□□□ 1.1
LIMS2-211ENST00000426981 CRY2Q49AN0 593 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms