RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 GOLGA2Q08379 1002 aa18.76■□□□□ 0.59
NCKIPSD-205ENST00000426678 TCIRG1Q13488 830 aa18.76■□□□□ 0.59
NCKIPSD-205ENST00000426678 SOGA3Q5TF21 947 aa18.75■□□□□ 0.59
NCKIPSD-205ENST00000426678 TSPYL6Q8N831 410 aa18.75■□□□□ 0.59
NCKIPSD-205ENST00000426678 FANCIQ9NVI1 1328 aa18.74■□□□□ 0.59
NCKIPSD-205ENST00000426678 LMNB1P20700 586 aa18.74■□□□□ 0.59
NCKIPSD-205ENST00000426678 ALDH1B1P30837 517 aa18.74■□□□□ 0.59
NCKIPSD-205ENST00000426678 TWISTNBQ3B726 338 aaPredicted RBP18.74■□□□□ 0.59
NCKIPSD-205ENST00000426678 NLRP10Q86W26 655 aa18.74■□□□□ 0.59
NCKIPSD-205ENST00000426678 RPGRQ92834 1020 aaKnown RBP18.74■□□□□ 0.59
NCKIPSD-205ENST00000426678 FER1L6Q2WGJ9 1857 aa18.73■□□□□ 0.59
NCKIPSD-205ENST00000426678 CRY2Q49AN0 593 aa18.73■□□□□ 0.59
NCKIPSD-205ENST00000426678 RIC3Q7Z5B4 369 aa18.73■□□□□ 0.59
NCKIPSD-205ENST00000426678 STK31Q9BXU1 1019 aa18.73■□□□□ 0.59
NCKIPSD-205ENST00000426678 NFKBIEO00221 500 aa18.72■□□□□ 0.59
NCKIPSD-205ENST00000426678 NLRP3Q96P20 1036 aa18.72■□□□□ 0.59
NCKIPSD-205ENST00000426678 PHAXQ9H814 394 aaKnown RBP18.72■□□□□ 0.59
NCKIPSD-205ENST00000426678 TRMT112Q9UI30 125 aaKnown RBP18.72■□□□□ 0.59
NCKIPSD-205ENST00000426678 CCDC88AQ3V6T2 1871 aa18.71■□□□□ 0.59
NCKIPSD-205ENST00000426678 DDX58O95786 925 aaKnown RBP18.71■□□□□ 0.59
NCKIPSD-205ENST00000426678 CCDC93Q567U6 631 aa18.71■□□□□ 0.59
NCKIPSD-205ENST00000426678 TAOK3Q9H2K8 898 aa18.71■□□□□ 0.59
NCKIPSD-205ENST00000426678 MYH16Q9H6N6 1097 aa18.71■□□□□ 0.59
NCKIPSD-205ENST00000426678 TIAM2Q8IVF5 1701 aa18.71■□□□□ 0.59
NCKIPSD-205ENST00000426678 SH3TC1Q8TE82 1336 aa18.71■□□□□ 0.59
NCKIPSD-205ENST00000426678 ISCA1Q9BUE6 129 aa18.7■□□□□ 0.58
NCKIPSD-205ENST00000426678 ZC3H4Q9UPT8 1303 aaKnown RBP18.7■□□□□ 0.58
NCKIPSD-205ENST00000426678 ATP5J2-PTCD1G3V325 749 aa18.69■□□□□ 0.58
NCKIPSD-205ENST00000426678 CCER2I3L3R5 266 aa18.69■□□□□ 0.58
NCKIPSD-205ENST00000426678 SLC10A5Q5PT55 438 aa18.69■□□□□ 0.58
NCKIPSD-205ENST00000426678 RBM17Q96I25 401 aaKnown RBP18.69■□□□□ 0.58
NCKIPSD-205ENST00000426678 LTBP3Q9NS15 1303 aa18.69■□□□□ 0.58
NCKIPSD-205ENST00000426678 TCERG1O14776 1098 aaKnown RBP18.68■□□□□ 0.58
NCKIPSD-205ENST00000426678 HOXA10P31260 410 aaPredicted RBP18.68■□□□□ 0.58
NCKIPSD-205ENST00000426678 C3orf67Q6ZVT6 689 aa18.68■□□□□ 0.58
NCKIPSD-205ENST00000426678 ZNF428Q96B54 188 aa18.68■□□□□ 0.58
NCKIPSD-205ENST00000426678 LAMB2P55268 1798 aa18.68■□□□□ 0.58
NCKIPSD-205ENST00000426678 HCLS1P14317 486 aaPredicted RBP18.67■□□□□ 0.58
NCKIPSD-205ENST00000426678 PRELPP51888 382 aa18.67■□□□□ 0.58
NCKIPSD-205ENST00000426678 EXOSC9Q06265 439 aaKnown RBP18.67■□□□□ 0.58
NCKIPSD-205ENST00000426678 C7orf43Q8WVR3 580 aa18.67■□□□□ 0.58
NCKIPSD-205ENST00000426678 CRAMP1Q96RY5 1269 aa18.67■□□□□ 0.58
NCKIPSD-205ENST00000426678 MYD88Q99836 296 aa18.67■□□□□ 0.58
NCKIPSD-205ENST00000426678 KDM2BQ8NHM5 1336 aa18.67■□□□□ 0.58
NCKIPSD-205ENST00000426678 DICER1Q9UPY3 1922 aaKnown RBP18.66■□□□□ 0.58
NCKIPSD-205ENST00000426678 C1QTNF8P60827 252 aa18.66■□□□□ 0.58
NCKIPSD-205ENST00000426678 TRIM28Q13263 835 aaKnown RBP18.66■□□□□ 0.58
NCKIPSD-205ENST00000426678 RTKN2Q8IZC4 609 aa18.66■□□□□ 0.58
NCKIPSD-205ENST00000426678 SPINK5Q9NQ38 1064 aaPredicted RBP18.66■□□□□ 0.58
NCKIPSD-205ENST00000426678 DDX60Q8IY21 1712 aaKnown RBP18.66■□□□□ 0.58
NCKIPSD-205ENST00000426678 CACNA1FO60840 1977 aa18.65■□□□□ 0.58
NCKIPSD-205ENST00000426678 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
NCKIPSD-205ENST00000426678 CC2D2BQ6DHV5 1058 aa18.65■□□□□ 0.58
NCKIPSD-205ENST00000426678 SYNE4Q8N205 404 aa18.65■□□□□ 0.58
NCKIPSD-205ENST00000426678 PPEF1O14829 653 aaPredicted RBP18.64■□□□□ 0.57
NCKIPSD-205ENST00000426678 FKBP4Q02790 459 aaKnown RBP eCLIP18.64■□□□□ 0.57
NCKIPSD-205ENST00000426678 OLFM4Q6UX06 510 aa18.64■□□□□ 0.57
NCKIPSD-205ENST00000426678 KSR2Q6VAB6 950 aa18.64■□□□□ 0.57
NCKIPSD-205ENST00000426678 FAM89AQ96GI7 184 aa18.64■□□□□ 0.57
NCKIPSD-205ENST00000426678 METTL22Q9BUU2 404 aaPredicted RBP18.64■□□□□ 0.57
NCKIPSD-205ENST00000426678 MAP3K2Q9Y2U5 619 aa18.64■□□□□ 0.57
NCKIPSD-205ENST00000426678 ZNF521Q96K83 1311 aa18.64■□□□□ 0.57
NCKIPSD-205ENST00000426678 PI4KAP2A4QPH2 592 aa18.63■□□□□ 0.57
NCKIPSD-205ENST00000426678 VAMP4O75379 141 aa18.63■□□□□ 0.57
NCKIPSD-205ENST00000426678 NEXNQ0ZGT2 675 aa18.63■□□□□ 0.57
NCKIPSD-205ENST00000426678 RTL5Q5HYW3 569 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-205ENST00000426678 PI4KAP1Q8N8J0 262 aa18.63■□□□□ 0.57
NCKIPSD-205ENST00000426678 CCDC191Q8NCU4 936 aa18.63■□□□□ 0.57
NCKIPSD-205ENST00000426678 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-205ENST00000426678 NMRK2Q9NPI5 230 aa18.63■□□□□ 0.57
NCKIPSD-205ENST00000426678 ABCC4O15439 1325 aa18.63■□□□□ 0.57
NCKIPSD-205ENST00000426678 KIF3CO14782 793 aa18.62■□□□□ 0.57
NCKIPSD-205ENST00000426678 HSP90B1P14625 803 aaKnown RBP18.62■□□□□ 0.57
NCKIPSD-205ENST00000426678 GRIPAP1Q4V328 841 aa18.62■□□□□ 0.57
NCKIPSD-205ENST00000426678 DDX46Q7L014 1031 aaKnown RBP18.62■□□□□ 0.57
NCKIPSD-205ENST00000426678 G2E3Q7L622 706 aa18.62■□□□□ 0.57
NCKIPSD-205ENST00000426678 CWC25Q9NXE8 425 aaPredicted RBP18.62■□□□□ 0.57
NCKIPSD-205ENST00000426678 IRS4O14654 1257 aaPredicted RBP18.61■□□□□ 0.57
NCKIPSD-205ENST00000426678 FLIIQ13045 1269 aa18.61■□□□□ 0.57
NCKIPSD-205ENST00000426678 DIEXFQ68CQ4 756 aaKnown RBP18.61■□□□□ 0.57
NCKIPSD-205ENST00000426678 ZBTB38Q8NAP3 1195 aaPredicted RBP18.61■□□□□ 0.57
NCKIPSD-205ENST00000426678 GLTPD2A6NH11 291 aa18.6■□□□□ 0.57
NCKIPSD-205ENST00000426678 FKBP5Q13451 457 aaPredicted RBP18.6■□□□□ 0.57
NCKIPSD-205ENST00000426678 DPY19L2Q6NUT2 758 aa18.6■□□□□ 0.57
NCKIPSD-205ENST00000426678 PSMD1Q99460 953 aa18.6■□□□□ 0.57
NCKIPSD-205ENST00000426678 ZNF277Q9NRM2 450 aaPredicted RBP18.6■□□□□ 0.57
NCKIPSD-205ENST00000426678 SNED1Q8TER0 1413 aa18.59■□□□□ 0.57
NCKIPSD-205ENST00000426678 PCCAP05165 728 aaPredicted RBP18.59■□□□□ 0.57
NCKIPSD-205ENST00000426678 GRAPQ13588 217 aa18.59■□□□□ 0.57
NCKIPSD-205ENST00000426678 C16orf71Q8IYS4 520 aaPredicted RBP18.59■□□□□ 0.57
NCKIPSD-205ENST00000426678 GRAPLQ8TC17 118 aaPredicted RBP18.59■□□□□ 0.57
NCKIPSD-205ENST00000426678 ATP6V0A2Q9Y487 856 aa18.59■□□□□ 0.57
NCKIPSD-205ENST00000426678 E9PSI1 815 aa18.58■□□□□ 0.56
NCKIPSD-205ENST00000426678 BBOX1O75936 387 aa18.58■□□□□ 0.56
NCKIPSD-205ENST00000426678 IARSP41252 1262 aaKnown RBP18.58■□□□□ 0.56
NCKIPSD-205ENST00000426678 SF3B3Q15393 1217 aaKnown RBP18.58■□□□□ 0.56
NCKIPSD-205ENST00000426678 IGKV5-2P06315 115 aa18.57■□□□□ 0.56
NCKIPSD-205ENST00000426678 RRAGCQ9HB90 399 aa18.57■□□□□ 0.56
NCKIPSD-205ENST00000426678 TAF1P21675 1872 aa18.56■□□□□ 0.56
NCKIPSD-205ENST00000426678 TOMM70O94826 608 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms