RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 NISCHQ9Y2I1 1504 aa35.58■■■■□ 3.29
NCKIPSD-205ENST00000426678 CCDC180Q9P1Z9 1646 aa31.77■■■□□ 2.68
NCKIPSD-205ENST00000426678 ABCC9O60706 1549 aa31.23■■■□□ 2.59
NCKIPSD-205ENST00000426678 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
NCKIPSD-205ENST00000426678 NACADO15069 1562 aa29.89■■■□□ 2.38
NCKIPSD-205ENST00000426678 DCAF8L2P0C7V8 631 aa29.81■■■□□ 2.36
NCKIPSD-205ENST00000426678 MYO15BQ96JP2 1530 aa29.63■■■□□ 2.33
NCKIPSD-205ENST00000426678 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
NCKIPSD-205ENST00000426678 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
NCKIPSD-205ENST00000426678 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
NCKIPSD-205ENST00000426678 PABPN1Q86U42 306 aaKnown RBP eCLIP29.11■■■□□ 2.25
NCKIPSD-205ENST00000426678 BICRAQ9NZM4 1560 aa29.03■■■□□ 2.24
NCKIPSD-205ENST00000426678 SCRIBQ14160 1630 aa28.97■■■□□ 2.23
NCKIPSD-205ENST00000426678 SHROOM4Q9ULL8 1493 aa28.76■■■□□ 2.19
NCKIPSD-205ENST00000426678 DNAJC5BQ9UF47 199 aa28.73■■■□□ 2.19
NCKIPSD-205ENST00000426678 EIF4G1Q04637 1599 aaKnown RBP28.31■■■□□ 2.12
NCKIPSD-205ENST00000426678 CC2D2AQ9P2K1 1620 aa28.24■■■□□ 2.11
NCKIPSD-205ENST00000426678 CECR2Q9BXF3 1484 aa28.08■■■□□ 2.09
NCKIPSD-205ENST00000426678 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
NCKIPSD-205ENST00000426678 BAZ1AQ9NRL2 1556 aaPredicted RBP27.62■■■□□ 2.01
NCKIPSD-205ENST00000426678 NCAPD3P42695 1498 aa27.54■■■□□ 2
NCKIPSD-205ENST00000426678 ATAD2BQ9ULI0 1458 aa27.54■■■□□ 2
NCKIPSD-205ENST00000426678 SMARCA2P51531 1590 aa27.53■■■□□ 2
NCKIPSD-205ENST00000426678 HMGXB3Q12766 1538 aa27.43■■□□□ 1.98
NCKIPSD-205ENST00000426678 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
NCKIPSD-205ENST00000426678 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.97
NCKIPSD-205ENST00000426678 BAZ1BQ9UIG0 1483 aaKnown RBP27.35■■□□□ 1.97
NCKIPSD-205ENST00000426678 WIZO95785 1651 aa27.13■■□□□ 1.93
NCKIPSD-205ENST00000426678 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
NCKIPSD-205ENST00000426678 ERCC6Q03468 1493 aa26.96■■□□□ 1.91
NCKIPSD-205ENST00000426678 NESP48681 1621 aa26.94■■□□□ 1.9
NCKIPSD-205ENST00000426678 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.9
NCKIPSD-205ENST00000426678 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
NCKIPSD-205ENST00000426678 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
NCKIPSD-205ENST00000426678 CUX2O14529 1486 aa26.72■■□□□ 1.87
NCKIPSD-205ENST00000426678 PDS5BQ9NTI5 1447 aa26.71■■□□□ 1.87
NCKIPSD-205ENST00000426678 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
NCKIPSD-205ENST00000426678 THOC2Q8NI27 1593 aaKnown RBP26.61■■□□□ 1.85
NCKIPSD-205ENST00000426678 CFTRP13569 1480 aa26.55■■□□□ 1.84
NCKIPSD-205ENST00000426678 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
NCKIPSD-205ENST00000426678 CEP164Q9UPV0 1460 aa26.46■■□□□ 1.83
NCKIPSD-205ENST00000426678 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
NCKIPSD-205ENST00000426678 MRC2Q9UBG0 1479 aa26.45■■□□□ 1.82
NCKIPSD-205ENST00000426678 PRDM2Q13029 1718 aa26.39■■□□□ 1.82
NCKIPSD-205ENST00000426678 WDR62O43379 1518 aa26.36■■□□□ 1.81
NCKIPSD-205ENST00000426678 SUPT5HO00267 1087 aaKnown RBP26.22■■□□□ 1.79
NCKIPSD-205ENST00000426678 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
NCKIPSD-205ENST00000426678 DNAJC5Q9H3Z4 198 aa26.05■■□□□ 1.76
NCKIPSD-205ENST00000426678 ABCC8Q09428 1581 aa26.01■■□□□ 1.75
NCKIPSD-205ENST00000426678 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
NCKIPSD-205ENST00000426678 DNMBPQ6XZF7 1577 aa25.99■■□□□ 1.75
NCKIPSD-205ENST00000426678 IFT140Q96RY7 1462 aa25.9■■□□□ 1.74
NCKIPSD-205ENST00000426678 POLA1P09884 1462 aaPredicted RBP25.78■■□□□ 1.72
NCKIPSD-205ENST00000426678 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
NCKIPSD-205ENST00000426678 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
NCKIPSD-205ENST00000426678 CUX1P39880 1505 aa25.73■■□□□ 1.71
NCKIPSD-205ENST00000426678 EIF4G3O43432 1585 aaKnown RBP25.71■■□□□ 1.71
NCKIPSD-205ENST00000426678 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
NCKIPSD-205ENST00000426678 SOGA1O94964 1423 aa25.65■■□□□ 1.7
NCKIPSD-205ENST00000426678 RAD54L2Q9Y4B4 1467 aa25.65■■□□□ 1.7
NCKIPSD-205ENST00000426678 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.696e-7■■■■■ 27.6
NCKIPSD-205ENST00000426678 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
NCKIPSD-205ENST00000426678 OSCARQ8IYS5 282 aa25.55■■□□□ 1.68
NCKIPSD-205ENST00000426678 TDRD9Q8NDG6 1382 aaKnown RBP25.53■■□□□ 1.68
NCKIPSD-205ENST00000426678 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
NCKIPSD-205ENST00000426678 BIVM-ERCC5R4GMW8 1640 aa25.49■■□□□ 1.67
NCKIPSD-205ENST00000426678 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
NCKIPSD-205ENST00000426678 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
NCKIPSD-205ENST00000426678 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
NCKIPSD-205ENST00000426678 CHD1O14646 1710 aa25.42■■□□□ 1.66
NCKIPSD-205ENST00000426678 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
NCKIPSD-205ENST00000426678 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
NCKIPSD-205ENST00000426678 GAPVD1Q14C86 1478 aa25.37■■□□□ 1.65
NCKIPSD-205ENST00000426678 PBRM1Q86U86 1689 aa25.36■■□□□ 1.65
NCKIPSD-205ENST00000426678 MAGI1Q96QZ7 1491 aaPredicted RBP25.36■■□□□ 1.65
NCKIPSD-205ENST00000426678 FBLN2P98095 1184 aa25.36■■□□□ 1.65
NCKIPSD-205ENST00000426678 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
NCKIPSD-205ENST00000426678 SYNJ2O15056 1496 aa25.26■■□□□ 1.63
NCKIPSD-205ENST00000426678 CHMP7Q8WUX9 453 aaPredicted RBP25.25■■□□□ 1.63
NCKIPSD-205ENST00000426678 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
NCKIPSD-205ENST00000426678 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
NCKIPSD-205ENST00000426678 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
NCKIPSD-205ENST00000426678 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
NCKIPSD-205ENST00000426678 ARHGEF11O15085 1522 aa25.16■■□□□ 1.62
NCKIPSD-205ENST00000426678 ADAMTS12P58397 1594 aa25.14■■□□□ 1.62
NCKIPSD-205ENST00000426678 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
NCKIPSD-205ENST00000426678 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
NCKIPSD-205ENST00000426678 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
NCKIPSD-205ENST00000426678 GRIN2AQ12879 1464 aa25.07■■□□□ 1.6
NCKIPSD-205ENST00000426678 KIF27Q86VH2 1401 aa25.01■■□□□ 1.59
NCKIPSD-205ENST00000426678 NUP160Q12769 1436 aa24.95■■□□□ 1.59
NCKIPSD-205ENST00000426678 CEP170Q5SW79 1584 aa24.95■■□□□ 1.58
NCKIPSD-205ENST00000426678 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
NCKIPSD-205ENST00000426678 CYB5RLQ6IPT4 315 aa24.91■■□□□ 1.58
NCKIPSD-205ENST00000426678 CUL7Q14999 1698 aa24.9■■□□□ 1.58
NCKIPSD-205ENST00000426678 IGF1RP08069 1367 aa24.88■■□□□ 1.57
NCKIPSD-205ENST00000426678 SHROOM2Q13796 1616 aa24.79■■□□□ 1.56
NCKIPSD-205ENST00000426678 RUSC2Q8N2Y8 1516 aa24.78■■□□□ 1.56
NCKIPSD-205ENST00000426678 CARMIL1Q5VZK9 1371 aa24.76■■□□□ 1.55
NCKIPSD-205ENST00000426678 ERCC6L2Q5T890 1561 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms