RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 AFDNP55196 1824 aaKnown RBP31.13■■■□□ 2.57
VEGFA-209ENST00000425836 TGFB2P61812 414 aa31.13■■■□□ 2.57
VEGFA-209ENST00000425836 CWF19L2Q2TBE0 894 aaKnown RBP31.13■■■□□ 2.57
VEGFA-209ENST00000425836 BEND3Q5T5X7 828 aa31.13■■■□□ 2.57
VEGFA-209ENST00000425836 KIF16BQ96L93 1317 aa31.12■■■□□ 2.57
VEGFA-209ENST00000425836 NEURL1BA8MQ27 555 aa31.12■■■□□ 2.57
VEGFA-209ENST00000425836 LINS1Q8NG48 757 aa31.12■■■□□ 2.57
VEGFA-209ENST00000425836 CWC25Q9NXE8 425 aaPredicted RBP31.12■■■□□ 2.57
VEGFA-209ENST00000425836 SLC4A10Q6U841 1118 aa31.11■■■□□ 2.57
VEGFA-209ENST00000425836 RNF123Q5XPI4 1314 aa31.1■■■□□ 2.57
VEGFA-209ENST00000425836 SYNE4Q8N205 404 aa31.1■■■□□ 2.57
VEGFA-209ENST00000425836 ABCC12Q96J65 1359 aa31.1■■■□□ 2.57
VEGFA-209ENST00000425836 ANKRD36CQ5JPF3 1778 aa31.1■■■□□ 2.57
VEGFA-209ENST00000425836 ARHGAP45Q92619 1136 aa31.09■■■□□ 2.57
VEGFA-209ENST00000425836 FAM89AQ96GI7 184 aa31.09■■■□□ 2.57
VEGFA-209ENST00000425836 SH3TC1Q8TE82 1336 aa31.09■■■□□ 2.57
VEGFA-209ENST00000425836 A0A0G2JLW4 131 aa31.09■■■□□ 2.57
VEGFA-209ENST00000425836 API5Q9BZZ5 524 aaKnown RBP31.09■■■□□ 2.57
VEGFA-209ENST00000425836 RCAN3Q9UKA8 241 aa31.09■■■□□ 2.57
VEGFA-209ENST00000425836 DPEP1P16444 411 aa31.08■■■□□ 2.57
VEGFA-209ENST00000425836 PDE6BP35913 854 aa31.08■■■□□ 2.57
VEGFA-209ENST00000425836 SLC10A5Q5PT55 438 aa31.08■■■□□ 2.57
VEGFA-209ENST00000425836 ZBTB38Q8NAP3 1195 aaPredicted RBP31.08■■■□□ 2.57
VEGFA-209ENST00000425836 FRAT1Q92837 279 aaPredicted RBP31.08■■■□□ 2.57
VEGFA-209ENST00000425836 PXDNLA1KZ92 1463 aa31.07■■■□□ 2.56
VEGFA-209ENST00000425836 IPO8O15397 1037 aaKnown RBP31.06■■■□□ 2.56
VEGFA-209ENST00000425836 CHRNA5P30532 468 aa31.06■■■□□ 2.56
VEGFA-209ENST00000425836 GCKRQ14397 625 aa31.06■■■□□ 2.56
VEGFA-209ENST00000425836 RTL5Q5HYW3 569 aaPredicted RBP31.06■■■□□ 2.56
VEGFA-209ENST00000425836 PCCAP05165 728 aaPredicted RBP31.05■■■□□ 2.56
VEGFA-209ENST00000425836 SRCIN1Q9C0H9 1055 aa31.05■■■□□ 2.56
VEGFA-209ENST00000425836 KIF13BQ9NQT8 1826 aa31.05■■■□□ 2.56
VEGFA-209ENST00000425836 KLRG2A4D1S0 409 aaPredicted RBP31.05■■■□□ 2.56
VEGFA-209ENST00000425836 KCNA3P22001 575 aa31.05■■■□□ 2.56
VEGFA-209ENST00000425836 C2CD5Q86YS7 1000 aa31.05■■■□□ 2.56
VEGFA-209ENST00000425836 JARID2Q92833 1246 aaPredicted RBP31.05■■■□□ 2.56
VEGFA-209ENST00000425836 ALDH1L1O75891 902 aa31.04■■■□□ 2.56
VEGFA-209ENST00000425836 HCLS1P14317 486 aaPredicted RBP31.04■■■□□ 2.56
VEGFA-209ENST00000425836 H0YIN7 160 aa31.03■■■□□ 2.56
VEGFA-209ENST00000425836 ATF7IPQ6VMQ6 1270 aa31.03■■■□□ 2.56
VEGFA-209ENST00000425836 RIC1Q4ADV7 1423 aa31.02■■■□□ 2.56
VEGFA-209ENST00000425836 TRIM27P14373 513 aa31.02■■■□□ 2.56
VEGFA-209ENST00000425836 ZKSCAN2Q63HK3 967 aa31.02■■■□□ 2.56
VEGFA-209ENST00000425836 PDZRN3Q9UPQ7 1066 aa31.02■■■□□ 2.56
VEGFA-209ENST00000425836 H7C1W4 665 aa31.01■■■□□ 2.56
VEGFA-209ENST00000425836 C3orf67Q6ZVT6 689 aa31.01■■■□□ 2.56
VEGFA-209ENST00000425836 IRS4O14654 1257 aaPredicted RBP31■■■□□ 2.55
VEGFA-209ENST00000425836 TNNQ9UQP3 1299 aa31■■■□□ 2.55
VEGFA-209ENST00000425836 SRGNP10124 158 aa31■■■□□ 2.55
VEGFA-209ENST00000425836 NLRP3Q96P20 1036 aa31■■■□□ 2.55
VEGFA-209ENST00000425836 ANKRD31Q8N7Z5 1873 aa30.99■■■□□ 2.55
VEGFA-209ENST00000425836 CASP7P55210 303 aa30.98■■■□□ 2.55
VEGFA-209ENST00000425836 CRY2Q49AN0 593 aa30.98■■■□□ 2.55
VEGFA-209ENST00000425836 UBE3BQ7Z3V4 1068 aa30.98■■■□□ 2.55
VEGFA-209ENST00000425836 WWC3Q9ULE0 1092 aa30.98■■■□□ 2.55
VEGFA-209ENST00000425836 ABCC4O15439 1325 aa30.98■■■□□ 2.55
VEGFA-209ENST00000425836 KIAA1551Q9HCM1 1747 aa30.98■■■□□ 2.55
VEGFA-209ENST00000425836 CCT4P50991 539 aaKnown RBP30.97■■■□□ 2.55
VEGFA-209ENST00000425836 CDHR2Q9BYE9 1310 aa30.97■■■□□ 2.55
VEGFA-209ENST00000425836 CLUAP1Q96AJ1 413 aa30.96■■■□□ 2.55
VEGFA-209ENST00000425836 MASTLQ96GX5 879 aa30.96■■■□□ 2.55
VEGFA-209ENST00000425836 PIM2Q9P1W9 311 aa30.96■■■□□ 2.55
VEGFA-209ENST00000425836 GRM8O00222 908 aa30.96■■■□□ 2.55
VEGFA-209ENST00000425836 ZNF622Q969S3 477 aaKnown RBP eCLIP30.96■■■□□ 2.553e-13■□□□□ 10.5
VEGFA-209ENST00000425836 HSP90B1P14625 803 aaKnown RBP30.95■■■□□ 2.54
VEGFA-209ENST00000425836 C9orf78Q9NZ63 289 aaPredicted RBP30.95■■■□□ 2.54
VEGFA-209ENST00000425836 TNRC6CQ9HCJ0 1690 aaKnown RBP30.95■■■□□ 2.54
VEGFA-209ENST00000425836 NPR1P16066 1061 aa30.94■■■□□ 2.54
VEGFA-209ENST00000425836 INTS3Q68E01 1043 aaKnown RBP30.94■■■□□ 2.54
VEGFA-209ENST00000425836 STYK1Q6J9G0 422 aa30.94■■■□□ 2.54
VEGFA-209ENST00000425836 N4BP2Q86UW6 1770 aaPredicted RBP30.93■■■□□ 2.54
VEGFA-209ENST00000425836 PDE8AO60658 829 aa30.92■■■□□ 2.54
VEGFA-209ENST00000425836 HOXA10P31260 410 aaPredicted RBP30.92■■■□□ 2.54
VEGFA-209ENST00000425836 SF3B3Q15393 1217 aaKnown RBP30.92■■■□□ 2.54
VEGFA-209ENST00000425836 RPGRQ92834 1020 aaKnown RBP30.92■■■□□ 2.54
VEGFA-209ENST00000425836 UTYO14607 1347 aa30.91■■■□□ 2.54
VEGFA-209ENST00000425836 TTLL6Q8N841 843 aa30.91■■■□□ 2.54
VEGFA-209ENST00000425836 USP44Q9H0E7 712 aa30.91■■■□□ 2.54
VEGFA-209ENST00000425836 NBPF7P0C2Y1 421 aaPredicted RBP30.9■■■□□ 2.54
VEGFA-209ENST00000425836 DALRD3Q5D0E6 543 aaKnown RBP30.9■■■□□ 2.54
VEGFA-209ENST00000425836 DZIP1LQ8IYY4 767 aaKnown RBP30.9■■■□□ 2.54
VEGFA-209ENST00000425836 PELP1Q8IZL8 1130 aaKnown RBP30.9■■■□□ 2.54
VEGFA-209ENST00000425836 CNKSR1Q969H4 720 aa30.9■■■□□ 2.54
VEGFA-209ENST00000425836 PLA2G12BQ9BX93 195 aa30.9■■■□□ 2.54
VEGFA-209ENST00000425836 PLIN1O60240 522 aa30.89■■■□□ 2.54
VEGFA-209ENST00000425836 BCS1LQ9Y276 419 aa30.89■■■□□ 2.54
VEGFA-209ENST00000425836 RLBP1P12271 317 aa30.88■■■□□ 2.53
VEGFA-209ENST00000425836 YBX3P16989 372 aaKnown RBP eCLIP30.88■■■□□ 2.53
VEGFA-209ENST00000425836 TMEM57Q8N5G2 664 aa30.88■■■□□ 2.53
VEGFA-209ENST00000425836 RBM17Q96I25 401 aaKnown RBP30.88■■■□□ 2.53
VEGFA-209ENST00000425836 COL11A2P13942 1736 aaPredicted RBP30.88■■■□□ 2.53
VEGFA-209ENST00000425836 GPR162Q16538 588 aa30.88■■■□□ 2.53
VEGFA-209ENST00000425836 FTSJ3Q8IY81 847 aaKnown RBP30.88■■■□□ 2.53
VEGFA-209ENST00000425836 ALDH1B1P30837 517 aa30.87■■■□□ 2.53
VEGFA-209ENST00000425836 CRAMP1Q96RY5 1269 aa30.87■■■□□ 2.53
VEGFA-209ENST00000425836 DDX60Q8IY21 1712 aaKnown RBP30.86■■■□□ 2.53
VEGFA-209ENST00000425836 CTSWP56202 376 aa30.86■■■□□ 2.53
VEGFA-209ENST00000425836 TTLL11Q8NHH1 800 aa30.85■■■□□ 2.53
VEGFA-209ENST00000425836 FOXO4P98177 505 aa30.84■■■□□ 2.53
VEGFA-209ENST00000425836 PRPF40BQ6NWY9 871 aaKnown RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms