RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 STAP2Q9UGK3 403 aa17.21■□□□□ 0.35
MSH5-206ENST00000423982 RUFY3Q7L099 469 aa17.2■□□□□ 0.34
MSH5-206ENST00000423982 SNX14Q9Y5W7 946 aa17.2■□□□□ 0.34
MSH5-206ENST00000423982 ZSCAN22P10073 491 aaPredicted RBP17.2■□□□□ 0.34
MSH5-206ENST00000423982 PLCH1Q4KWH8 1693 aa17.2■□□□□ 0.34
MSH5-206ENST00000423982 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
MSH5-206ENST00000423982 KDM6AO15550 1401 aaPredicted RBP17.2■□□□□ 0.34
MSH5-206ENST00000423982 FAM98CQ17RN3 349 aaKnown RBP17.2■□□□□ 0.34
MSH5-206ENST00000423982 USP44Q9H0E7 712 aa17.2■□□□□ 0.34
MSH5-206ENST00000423982 GNAI3P08754 354 aa17.19■□□□□ 0.34
MSH5-206ENST00000423982 USP21Q9UK80 565 aa17.19■□□□□ 0.34
MSH5-206ENST00000423982 ZHX1Q9UKY1 873 aaPredicted RBP17.19■□□□□ 0.34
MSH5-206ENST00000423982 PCDH11XQ9BZA7 1347 aa17.19■□□□□ 0.34
MSH5-206ENST00000423982 PCDH11YQ9BZA8 1340 aa17.19■□□□□ 0.34
MSH5-206ENST00000423982 STX6O43752 255 aa17.18■□□□□ 0.34
MSH5-206ENST00000423982 EIF2S2P20042 333 aaKnown RBP17.18■□□□□ 0.34
MSH5-206ENST00000423982 CWC27Q6UX04 472 aaKnown RBP17.18■□□□□ 0.34
MSH5-206ENST00000423982 SPC24Q8NBT2 197 aa17.18■□□□□ 0.34
MSH5-206ENST00000423982 TTC14Q96N46 770 aa17.18■□□□□ 0.34
MSH5-206ENST00000423982 PRAMEF22A3QJZ6 481 aa17.18■□□□□ 0.34
MSH5-206ENST00000423982 SURF6O75683 361 aaKnown RBP17.18■□□□□ 0.34
MSH5-206ENST00000423982 FAM184AQ8NB25 1140 aa17.18■□□□□ 0.34
MSH5-206ENST00000423982 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
MSH5-206ENST00000423982 SPATA31A1Q5TZJ5 1347 aa17.17■□□□□ 0.34
MSH5-206ENST00000423982 DNM1Q05193 864 aaKnown RBP17.17■□□□□ 0.34
MSH5-206ENST00000423982 CCDC94Q9BW85 323 aaPredicted RBP17.17■□□□□ 0.34
MSH5-206ENST00000423982 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
MSH5-206ENST00000423982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.343e-7■■□□□ 13.8
MSH5-206ENST00000423982 PYCARDQ9ULZ3 195 aa17.17■□□□□ 0.34
MSH5-206ENST00000423982 CHMP3Q9Y3E7 222 aa17.17■□□□□ 0.34
MSH5-206ENST00000423982 KDM4AO75164 1064 aa17.17■□□□□ 0.34
MSH5-206ENST00000423982 CABP4P57796 275 aa17.17■□□□□ 0.34
MSH5-206ENST00000423982 UVSSAQ2YD98 709 aa17.17■□□□□ 0.34
MSH5-206ENST00000423982 TMEM87AQ8NBN3 555 aa17.17■□□□□ 0.34
MSH5-206ENST00000423982 PI4K2BQ8TCG2 481 aa17.17■□□□□ 0.34
MSH5-206ENST00000423982 SPATA31A6Q5VVP1 1343 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 RAD50Q92878 1312 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 SGSM2O43147 1006 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 CBX1P83916 185 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 PPP1R42Q7Z4L9 355 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 MTERF4Q7Z6M4 381 aaKnown RBP17.16■□□□□ 0.34
MSH5-206ENST00000423982 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 KCNF1Q9H3M0 494 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 F13A1P00488 732 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 UBTFL1P0CB47 393 aaPredicted RBP17.16■□□□□ 0.34
MSH5-206ENST00000423982 UBE2HP62256 183 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 LSG1Q9H089 658 aaKnown RBP17.16■□□□□ 0.34
MSH5-206ENST00000423982 SLC52A2Q9HAB3 445 aa17.16■□□□□ 0.34
MSH5-206ENST00000423982 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
MSH5-206ENST00000423982 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
MSH5-206ENST00000423982 IL17RAQ96F46 866 aa17.15■□□□□ 0.34
MSH5-206ENST00000423982 SLIT2O94813 1529 aa17.15■□□□□ 0.34
MSH5-206ENST00000423982 EXOC5O00471 708 aa17.15■□□□□ 0.34
MSH5-206ENST00000423982 CASTP20810 708 aaKnown RBP17.15■□□□□ 0.34
MSH5-206ENST00000423982 ADCK5Q3MIX3 580 aa17.15■□□□□ 0.34
MSH5-206ENST00000423982 SMAP1Q8IYB5 467 aaPredicted RBP17.15■□□□□ 0.34
MSH5-206ENST00000423982 SMC3Q9UQE7 1217 aa17.15■□□□□ 0.34
MSH5-206ENST00000423982 CCDC30Q5VVM6 783 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 FUCA2Q9BTY2 467 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 BCL9LQ86UU0 1499 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 AFF2P51816 1311 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 SPATA31A5Q5VU36 1347 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 SPATA31A7Q8IWB4 1347 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 ANXA1P04083 346 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 ATP2B3Q16720 1220 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 FAM182BQ5T319 152 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 LIMCH1Q9UPQ0 1083 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
MSH5-206ENST00000423982 GJB2P29033 226 aa17.13■□□□□ 0.33
MSH5-206ENST00000423982 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
MSH5-206ENST00000423982 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
MSH5-206ENST00000423982 PRIMPOLQ96LW4 560 aa17.13■□□□□ 0.33
MSH5-206ENST00000423982 EIF4A1P60842 406 aaKnown RBP17.13■□□□□ 0.33
MSH5-206ENST00000423982 DDB1Q16531 1140 aa17.13■□□□□ 0.33
MSH5-206ENST00000423982 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
MSH5-206ENST00000423982 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
MSH5-206ENST00000423982 PARP4Q9UKK3 1724 aaKnown RBP17.13■□□□□ 0.33
MSH5-206ENST00000423982 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 NBPF7P0C2Y1 421 aaPredicted RBP17.12■□□□□ 0.33
MSH5-206ENST00000423982 PTH1RQ03431 593 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 NECAB1Q8N987 351 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 ACSBG1Q96GR2 724 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 SPTLC3Q9NUV7 552 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 VPS37CA5D8V6 355 aaPredicted RBP17.12■□□□□ 0.33
MSH5-206ENST00000423982 PTCD1O75127 700 aaKnown RBP17.12■□□□□ 0.33
MSH5-206ENST00000423982 HMGN5P82970 282 aaKnown RBP17.12■□□□□ 0.33
MSH5-206ENST00000423982 PPP4R3BQ5MIZ7 849 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 SPDYE4A6NLX3 237 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 ST3GAL1Q11201 340 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 CAMK4Q16566 473 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 MTMR6Q9Y217 621 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
MSH5-206ENST00000423982 PIP4K2AP48426 406 aaPredicted RBP17.11■□□□□ 0.33
MSH5-206ENST00000423982 HDGFL1Q5TGJ6 251 aa17.11■□□□□ 0.33
MSH5-206ENST00000423982 FERMT3Q86UX7 667 aa17.11■□□□□ 0.33
MSH5-206ENST00000423982 HYPKQ9NX55 129 aa17.11■□□□□ 0.33
MSH5-206ENST00000423982 PKD1L3Q7Z443 1732 aa17.11■□□□□ 0.33
MSH5-206ENST00000423982 NRAPQ86VF7 1730 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms