RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 NLRP10Q86W26 655 aa23.11■■□□□ 1.29
SBDSP1-202ENST00000423945 PLBD2Q8NHP8 589 aa23.11■■□□□ 1.29
SBDSP1-202ENST00000423945 HYPKQ9NX55 129 aa23.11■■□□□ 1.29
SBDSP1-202ENST00000423945 LAMB2P55268 1798 aa23.11■■□□□ 1.29
SBDSP1-202ENST00000423945 TIAM2Q8IVF5 1701 aa23.11■■□□□ 1.29
SBDSP1-202ENST00000423945 PPP1R42Q7Z4L9 355 aa23.1■■□□□ 1.29
SBDSP1-202ENST00000423945 PHAXQ9H814 394 aaKnown RBP23.1■■□□□ 1.29
SBDSP1-202ENST00000423945 DICER1Q9UPY3 1922 aaKnown RBP23.1■■□□□ 1.29
SBDSP1-202ENST00000423945 HSP90AB3PQ58FF7 597 aa23.09■■□□□ 1.29
SBDSP1-202ENST00000423945 ANKRD13DQ6ZTN6 518 aa23.09■■□□□ 1.29
SBDSP1-202ENST00000423945 LMNB1P20700 586 aa23.08■■□□□ 1.29
SBDSP1-202ENST00000423945 OLFM4Q6UX06 510 aa23.08■■□□□ 1.29
SBDSP1-202ENST00000423945 SYNE4Q8N205 404 aa23.08■■□□□ 1.29
SBDSP1-202ENST00000423945 UTP14AQ9BVJ6 771 aaKnown RBP23.08■■□□□ 1.29
SBDSP1-202ENST00000423945 KIF3CO14782 793 aa23.07■■□□□ 1.28
SBDSP1-202ENST00000423945 SLC10A5Q5PT55 438 aa23.07■■□□□ 1.28
SBDSP1-202ENST00000423945 ISCA1Q9BUE6 129 aa23.07■■□□□ 1.28
SBDSP1-202ENST00000423945 SPINK5Q9NQ38 1064 aaPredicted RBP23.07■■□□□ 1.28
SBDSP1-202ENST00000423945 SNED1Q8TER0 1413 aa23.07■■□□□ 1.28
SBDSP1-202ENST00000423945 FANCIQ9NVI1 1328 aa23.07■■□□□ 1.28
SBDSP1-202ENST00000423945 DDX60Q8IY21 1712 aaKnown RBP23.06■■□□□ 1.28
SBDSP1-202ENST00000423945 HOXA10P31260 410 aaPredicted RBP23.06■■□□□ 1.28
SBDSP1-202ENST00000423945 WDR63Q8IWG1 891 aa23.06■■□□□ 1.28
SBDSP1-202ENST00000423945 ZNF428Q96B54 188 aa23.06■■□□□ 1.28
SBDSP1-202ENST00000423945 LTBP3Q9NS15 1303 aa23.06■■□□□ 1.28
SBDSP1-202ENST00000423945 SLC51AQ86UW1 340 aa23.05■■□□□ 1.28
SBDSP1-202ENST00000423945 RNF123Q5XPI4 1314 aa23.05■■□□□ 1.28
SBDSP1-202ENST00000423945 ALDH1B1P30837 517 aa23.04■■□□□ 1.28
SBDSP1-202ENST00000423945 CCDC30Q5VVM6 783 aa23.04■■□□□ 1.28
SBDSP1-202ENST00000423945 NMRK2Q9NPI5 230 aa23.04■■□□□ 1.28
SBDSP1-202ENST00000423945 ATP5J2-PTCD1G3V325 749 aa23.03■■□□□ 1.28
SBDSP1-202ENST00000423945 TCERG1O14776 1098 aaKnown RBP23.03■■□□□ 1.28
SBDSP1-202ENST00000423945 TWISTNBQ3B726 338 aaPredicted RBP23.03■■□□□ 1.28
SBDSP1-202ENST00000423945 TAOK3Q9H2K8 898 aa23.03■■□□□ 1.28
SBDSP1-202ENST00000423945 HCLS1P14317 486 aaPredicted RBP23.02■■□□□ 1.28
SBDSP1-202ENST00000423945 CCDC93Q567U6 631 aa23.02■■□□□ 1.28
SBDSP1-202ENST00000423945 SOGA3Q5TF21 947 aa23.02■■□□□ 1.28
SBDSP1-202ENST00000423945 TRMT112Q9UI30 125 aaKnown RBP23.02■■□□□ 1.28
SBDSP1-202ENST00000423945 TAF1P21675 1872 aa23.01■■□□□ 1.27
SBDSP1-202ENST00000423945 RPGRQ92834 1020 aaKnown RBP23.01■■□□□ 1.27
SBDSP1-202ENST00000423945 NLRP3Q96P20 1036 aa23.01■■□□□ 1.27
SBDSP1-202ENST00000423945 CRAMP1Q96RY5 1269 aa23.01■■□□□ 1.27
SBDSP1-202ENST00000423945 ZNF521Q96K83 1311 aa23.01■■□□□ 1.27
SBDSP1-202ENST00000423945 ZC3H4Q9UPT8 1303 aaKnown RBP23.01■■□□□ 1.27
SBDSP1-202ENST00000423945 GOLGA2Q08379 1002 aa23■■□□□ 1.27
SBDSP1-202ENST00000423945 TRIM28Q13263 835 aaKnown RBP23■■□□□ 1.27
SBDSP1-202ENST00000423945 RIC3Q7Z5B4 369 aa23■■□□□ 1.27
SBDSP1-202ENST00000423945 SH3TC1Q8TE82 1336 aa23■■□□□ 1.27
SBDSP1-202ENST00000423945 G2E3Q7L622 706 aa22.99■■□□□ 1.27
SBDSP1-202ENST00000423945 VAMP4O75379 141 aa22.98■■□□□ 1.27
SBDSP1-202ENST00000423945 EXOSC9Q06265 439 aaKnown RBP22.98■■□□□ 1.27
SBDSP1-202ENST00000423945 FAM89AQ96GI7 184 aa22.98■■□□□ 1.27
SBDSP1-202ENST00000423945 RBM17Q96I25 401 aaKnown RBP22.98■■□□□ 1.27
SBDSP1-202ENST00000423945 CACNA1FO60840 1977 aa22.98■■□□□ 1.27
SBDSP1-202ENST00000423945 COL4A1P02462 1669 aa22.97■■□□□ 1.27
SBDSP1-202ENST00000423945 FKBP4Q02790 459 aaKnown RBP eCLIP22.97■■□□□ 1.27
SBDSP1-202ENST00000423945 MYD88Q99836 296 aa22.97■■□□□ 1.27
SBDSP1-202ENST00000423945 CHMP4AQ9BY43 222 aa22.97■■□□□ 1.27
SBDSP1-202ENST00000423945 ABCC4O15439 1325 aa22.97■■□□□ 1.27
SBDSP1-202ENST00000423945 CEP350Q5VT06 3117 aa22.97■■□□□ 1.27
SBDSP1-202ENST00000423945 METTL22Q9BUU2 404 aaPredicted RBP22.96■■□□□ 1.27
SBDSP1-202ENST00000423945 KDM2BQ8NHM5 1336 aa22.96■■□□□ 1.27
SBDSP1-202ENST00000423945 GLTPD2A6NH11 291 aa22.95■■□□□ 1.26
SBDSP1-202ENST00000423945 RTKN2Q8IZC4 609 aa22.95■■□□□ 1.26
SBDSP1-202ENST00000423945 STK31Q9BXU1 1019 aa22.95■■□□□ 1.26
SBDSP1-202ENST00000423945 ZNF277Q9NRM2 450 aaPredicted RBP22.95■■□□□ 1.26
SBDSP1-202ENST00000423945 MAP3K2Q9Y2U5 619 aa22.95■■□□□ 1.26
SBDSP1-202ENST00000423945 PI4KAP2A4QPH2 592 aa22.94■■□□□ 1.26
SBDSP1-202ENST00000423945 PPEF1O14829 653 aaPredicted RBP22.94■■□□□ 1.26
SBDSP1-202ENST00000423945 SLC4A2P04920 1241 aa22.94■■□□□ 1.26
SBDSP1-202ENST00000423945 RTL5Q5HYW3 569 aaPredicted RBP22.94■■□□□ 1.26
SBDSP1-202ENST00000423945 KSR2Q6VAB6 950 aa22.94■■□□□ 1.26
SBDSP1-202ENST00000423945 PI4KAP1Q8N8J0 262 aa22.94■■□□□ 1.26
SBDSP1-202ENST00000423945 RRAGCQ9HB90 399 aa22.94■■□□□ 1.26
SBDSP1-202ENST00000423945 WDR90Q96KV7 1748 aa22.94■■□□□ 1.26
SBDSP1-202ENST00000423945 COL4A5P29400 1685 aa22.93■■□□□ 1.26
SBDSP1-202ENST00000423945 CCER2I3L3R5 266 aa22.93■■□□□ 1.26
SBDSP1-202ENST00000423945 DDX58O95786 925 aaKnown RBP22.93■■□□□ 1.26
SBDSP1-202ENST00000423945 PSMD1Q99460 953 aa22.93■■□□□ 1.26
SBDSP1-202ENST00000423945 IGKV5-2P06315 115 aa22.92■■□□□ 1.26
SBDSP1-202ENST00000423945 CC2D2BQ6DHV5 1058 aa22.92■■□□□ 1.26
SBDSP1-202ENST00000423945 CCDC191Q8NCU4 936 aa22.92■■□□□ 1.26
SBDSP1-202ENST00000423945 POTECB2RU33 542 aa22.91■■□□□ 1.26
SBDSP1-202ENST00000423945 SF3B3Q15393 1217 aaKnown RBP22.91■■□□□ 1.26
SBDSP1-202ENST00000423945 ZBTB38Q8NAP3 1195 aaPredicted RBP22.91■■□□□ 1.26
SBDSP1-202ENST00000423945 MYH16Q9H6N6 1097 aa22.91■■□□□ 1.26
SBDSP1-202ENST00000423945 LRRC37AA6NMS7 1700 aa22.91■■□□□ 1.26
SBDSP1-202ENST00000423945 IRS4O14654 1257 aaPredicted RBP22.9■■□□□ 1.26
SBDSP1-202ENST00000423945 TOMM70O94826 608 aa22.9■■□□□ 1.26
SBDSP1-202ENST00000423945 IARSP41252 1262 aaKnown RBP22.9■■□□□ 1.26
SBDSP1-202ENST00000423945 FLIIQ13045 1269 aa22.9■■□□□ 1.26
SBDSP1-202ENST00000423945 JARID2Q92833 1246 aaPredicted RBP22.9■■□□□ 1.26
SBDSP1-202ENST00000423945 ATP6V0A2Q9Y487 856 aa22.9■■□□□ 1.26
SBDSP1-202ENST00000423945 PCCAP05165 728 aaPredicted RBP22.89■■□□□ 1.25
SBDSP1-202ENST00000423945 GRAPQ13588 217 aa22.89■■□□□ 1.25
SBDSP1-202ENST00000423945 GRAPLQ8TC17 118 aaPredicted RBP22.89■■□□□ 1.25
SBDSP1-202ENST00000423945 CWC25Q9NXE8 425 aaPredicted RBP22.89■■□□□ 1.25
SBDSP1-202ENST00000423945 DDX46Q7L014 1031 aaKnown RBP22.88■■□□□ 1.25
SBDSP1-202ENST00000423945 ZNF541Q9H0D2 1346 aa22.87■■□□□ 1.25
SBDSP1-202ENST00000423945 BBOX1O75936 387 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms