RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 GTF2E1P29083 439 aaPredicted RBP27.63■■■□□ 2.01
SEC22C-207ENST00000423701 COL11A2P13942 1736 aaPredicted RBP27.62■■■□□ 2.01
SEC22C-207ENST00000423701 NEXNQ0ZGT2 675 aa27.62■■■□□ 2.01
SEC22C-207ENST00000423701 ERFEQ4G0M1 354 aa27.62■■■□□ 2.01
SEC22C-207ENST00000423701 PTPRCP08575 1304 aa27.62■■■□□ 2.01
SEC22C-207ENST00000423701 IGKV5-2P06315 115 aa27.61■■■□□ 2.01
SEC22C-207ENST00000423701 BRPF1P55201 1214 aaPredicted RBP27.61■■■□□ 2.01
SEC22C-207ENST00000423701 RNF123Q5XPI4 1314 aa27.61■■■□□ 2.01
SEC22C-207ENST00000423701 DLEC1Q9Y238 1755 aa27.61■■■□□ 2.01
SEC22C-207ENST00000423701 A0A0G2JLW4 131 aa27.6■■■□□ 2.01
SEC22C-207ENST00000423701 DPEP1P16444 411 aa27.6■■■□□ 2.01
SEC22C-207ENST00000423701 TRMT112Q9UI30 125 aaKnown RBP27.6■■■□□ 2.01
SEC22C-207ENST00000423701 RIC1Q4ADV7 1423 aa27.6■■■□□ 2.01
SEC22C-207ENST00000423701 CHRNA5P30532 468 aa27.59■■■□□ 2.01
SEC22C-207ENST00000423701 CCDC191Q8NCU4 936 aa27.59■■■□□ 2.01
SEC22C-207ENST00000423701 BRCA1P38398 1863 aaKnown RBP27.59■■■□□ 2.01
SEC22C-207ENST00000423701 PDE6BP35913 854 aa27.58■■■□□ 2.01
SEC22C-207ENST00000423701 CWF19L2Q2TBE0 894 aaKnown RBP27.58■■■□□ 2.01
SEC22C-207ENST00000423701 SH3TC1Q8TE82 1336 aa27.58■■■□□ 2.01
SEC22C-207ENST00000423701 NEURL1BA8MQ27 555 aa27.57■■■□□ 2
SEC22C-207ENST00000423701 CWC25Q9NXE8 425 aaPredicted RBP27.57■■■□□ 2
SEC22C-207ENST00000423701 BCAR3O75815 825 aa27.57■■■□□ 2
SEC22C-207ENST00000423701 KCNA3P22001 575 aa27.57■■■□□ 2
SEC22C-207ENST00000423701 C2CD5Q86YS7 1000 aa27.57■■■□□ 2
SEC22C-207ENST00000423701 SYNE4Q8N205 404 aa27.57■■■□□ 2
SEC22C-207ENST00000423701 GOLGB1Q14789 3259 aaKnown RBP27.56■■■□□ 2
SEC22C-207ENST00000423701 LINS1Q8NG48 757 aa27.56■■■□□ 2
SEC22C-207ENST00000423701 FAM89AQ96GI7 184 aa27.56■■■□□ 2
SEC22C-207ENST00000423701 NOB1Q9ULX3 412 aaKnown RBP27.56■■■□□ 2
SEC22C-207ENST00000423701 KIF16BQ96L93 1317 aa27.56■■■□□ 2
SEC22C-207ENST00000423701 DDX60Q8IY21 1712 aaKnown RBP27.56■■■□□ 2
SEC22C-207ENST00000423701 BEND3Q5T5X7 828 aa27.55■■■□□ 2
SEC22C-207ENST00000423701 WWC3Q9ULE0 1092 aa27.55■■■□□ 2
SEC22C-207ENST00000423701 LAMB2P55268 1798 aa27.54■■■□□ 2
SEC22C-207ENST00000423701 H0YIN7 160 aa27.54■■■□□ 2
SEC22C-207ENST00000423701 SLC10A5Q5PT55 438 aa27.54■■■□□ 2
SEC22C-207ENST00000423701 SLC4A10Q6U841 1118 aa27.54■■■□□ 2
SEC22C-207ENST00000423701 ZBTB38Q8NAP3 1195 aaPredicted RBP27.54■■■□□ 2
SEC22C-207ENST00000423701 PDZRN3Q9UPQ7 1066 aa27.54■■■□□ 2
SEC22C-207ENST00000423701 KLRG2A4D1S0 409 aaPredicted RBP27.53■■■□□ 2
SEC22C-207ENST00000423701 RTL5Q5HYW3 569 aaPredicted RBP27.53■■■□□ 2
SEC22C-207ENST00000423701 PCCAP05165 728 aaPredicted RBP27.51■■■□□ 2
SEC22C-207ENST00000423701 SRGNP10124 158 aa27.51■■■□□ 2
SEC22C-207ENST00000423701 HCLS1P14317 486 aaPredicted RBP27.51■■■□□ 2
SEC22C-207ENST00000423701 GCKRQ14397 625 aa27.51■■■□□ 2
SEC22C-207ENST00000423701 C3orf67Q6ZVT6 689 aa27.51■■□□□ 1.99
SEC22C-207ENST00000423701 PIM2Q9P1W9 311 aa27.51■■□□□ 1.99
SEC22C-207ENST00000423701 CRY2Q49AN0 593 aa27.5■■□□□ 1.99
SEC22C-207ENST00000423701 PELP1Q8IZL8 1130 aaKnown RBP27.5■■□□□ 1.99
SEC22C-207ENST00000423701 JARID2Q92833 1246 aaPredicted RBP27.5■■□□□ 1.99
SEC22C-207ENST00000423701 ARHGAP45Q92619 1136 aa27.49■■□□□ 1.99
SEC22C-207ENST00000423701 NLRP3Q96P20 1036 aa27.49■■□□□ 1.99
SEC22C-207ENST00000423701 API5Q9BZZ5 524 aaKnown RBP27.49■■□□□ 1.99
SEC22C-207ENST00000423701 SRCIN1Q9C0H9 1055 aa27.49■■□□□ 1.99
SEC22C-207ENST00000423701 IRS4O14654 1257 aaPredicted RBP27.48■■□□□ 1.99
SEC22C-207ENST00000423701 YBX3P16989 372 aaKnown RBP eCLIP27.48■■□□□ 1.992e-7■■□□□ 12.2
SEC22C-207ENST00000423701 FRAT1Q92837 279 aaPredicted RBP27.48■■□□□ 1.99
SEC22C-207ENST00000423701 ZNF622Q969S3 477 aaKnown RBP eCLIP27.48■■□□□ 1.99
SEC22C-207ENST00000423701 MASTLQ96GX5 879 aa27.48■■□□□ 1.99
SEC22C-207ENST00000423701 ALDH1L1O75891 902 aa27.47■■□□□ 1.99
SEC22C-207ENST00000423701 STYK1Q6J9G0 422 aa27.47■■□□□ 1.99
SEC22C-207ENST00000423701 CDHR2Q9BYE9 1310 aa27.47■■□□□ 1.99
SEC22C-207ENST00000423701 NPR1P16066 1061 aa27.46■■□□□ 1.99
SEC22C-207ENST00000423701 GPR162Q16538 588 aa27.46■■□□□ 1.99
SEC22C-207ENST00000423701 UBE3BQ7Z3V4 1068 aa27.46■■□□□ 1.99
SEC22C-207ENST00000423701 BCS1LQ9Y276 419 aa27.46■■□□□ 1.99
SEC22C-207ENST00000423701 CACNA1SQ13698 1873 aa27.46■■□□□ 1.99
SEC22C-207ENST00000423701 H7C1W4 665 aa27.45■■□□□ 1.99
SEC22C-207ENST00000423701 IPO8O15397 1037 aaKnown RBP27.45■■□□□ 1.99
SEC22C-207ENST00000423701 DALRD3Q5D0E6 543 aaKnown RBP27.45■■□□□ 1.99
SEC22C-207ENST00000423701 ARFGEF1Q9Y6D6 1849 aa27.45■■□□□ 1.98
SEC22C-207ENST00000423701 TRIM27P14373 513 aa27.44■■□□□ 1.98
SEC22C-207ENST00000423701 TTLL6Q8N841 843 aa27.44■■□□□ 1.98
SEC22C-207ENST00000423701 RCAN3Q9UKA8 241 aa27.44■■□□□ 1.98
SEC22C-207ENST00000423701 CASP7P55210 303 aa27.44■■□□□ 1.98
SEC22C-207ENST00000423701 ATF7IPQ6VMQ6 1270 aa27.44■■□□□ 1.98
SEC22C-207ENST00000423701 RPGRQ92834 1020 aaKnown RBP27.44■■□□□ 1.98
SEC22C-207ENST00000423701 ABCC4O15439 1325 aa27.43■■□□□ 1.98
SEC22C-207ENST00000423701 HSP90B1P14625 803 aaKnown RBP27.43■■□□□ 1.98
SEC22C-207ENST00000423701 UTRNP46939 3433 aa27.42■■□□□ 1.98
SEC22C-207ENST00000423701 DCAF8L1A6NGE4 600 aa27.42■■□□□ 1.98
SEC22C-207ENST00000423701 GRM8O00222 908 aa27.42■■□□□ 1.98
SEC22C-207ENST00000423701 HOXA10P31260 410 aaPredicted RBP27.42■■□□□ 1.98
SEC22C-207ENST00000423701 ZKSCAN2Q63HK3 967 aa27.42■■□□□ 1.98
SEC22C-207ENST00000423701 CNKSR1Q969H4 720 aa27.42■■□□□ 1.98
SEC22C-207ENST00000423701 TNNQ9UQP3 1299 aa27.42■■□□□ 1.98
SEC22C-207ENST00000423701 SLX4Q8IY92 1834 aa27.41■■□□□ 1.98
SEC22C-207ENST00000423701 PDE8AO60658 829 aa27.41■■□□□ 1.98
SEC22C-207ENST00000423701 CCT4P50991 539 aaKnown RBP27.4■■□□□ 1.98
SEC22C-207ENST00000423701 SF3B3Q15393 1217 aaKnown RBP27.4■■□□□ 1.98
SEC22C-207ENST00000423701 PRPF40BQ6NWY9 871 aaKnown RBP27.4■■□□□ 1.98
SEC22C-207ENST00000423701 C9orf78Q9NZ63 289 aaPredicted RBP27.4■■□□□ 1.98
SEC22C-207ENST00000423701 MYH3P11055 1940 aa27.4■■□□□ 1.98
SEC22C-207ENST00000423701 RBM17Q96I25 401 aaKnown RBP27.39■■□□□ 1.98
SEC22C-207ENST00000423701 CLUAP1Q96AJ1 413 aa27.38■■□□□ 1.97
SEC22C-207ENST00000423701 ALDH1B1P30837 517 aa27.38■■□□□ 1.97
SEC22C-207ENST00000423701 CRAMP1Q96RY5 1269 aa27.38■■□□□ 1.97
SEC22C-207ENST00000423701 CTSWP56202 376 aa27.37■■□□□ 1.97
SEC22C-207ENST00000423701 PLA2G12BQ9BX93 195 aa27.37■■□□□ 1.97
SEC22C-207ENST00000423701 UTYO14607 1347 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms