RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 SETDB2Q96T68 719 aa19.87■□□□□ 0.77
DDX55-203ENST00000421670 COG6Q9Y2V7 657 aa19.87■□□□□ 0.77
DDX55-203ENST00000421670 IRX6P78412 446 aaPredicted RBP19.87■□□□□ 0.77
DDX55-203ENST00000421670 DDR1Q08345 913 aa19.87■□□□□ 0.77
DDX55-203ENST00000421670 CWC25Q9NXE8 425 aaPredicted RBP19.87■□□□□ 0.77
DDX55-203ENST00000421670 MMP10P09238 476 aa19.86■□□□□ 0.77
DDX55-203ENST00000421670 TM4SF1P30408 202 aa19.86■□□□□ 0.77
DDX55-203ENST00000421670 TRIM28Q13263 835 aaKnown RBP19.86■□□□□ 0.77
DDX55-203ENST00000421670 SUSD4Q5VX71 490 aa19.86■□□□□ 0.77
DDX55-203ENST00000421670 CCDC191Q8NCU4 936 aa19.86■□□□□ 0.77
DDX55-203ENST00000421670 ANKRD31Q8N7Z5 1873 aa19.85■□□□□ 0.77
DDX55-203ENST00000421670 ALDH1L1O75891 902 aa19.85■□□□□ 0.77
DDX55-203ENST00000421670 GCKRQ14397 625 aa19.85■□□□□ 0.77
DDX55-203ENST00000421670 PARP10Q53GL7 1025 aa19.85■□□□□ 0.77
DDX55-203ENST00000421670 RTL5Q5HYW3 569 aaPredicted RBP19.85■□□□□ 0.77
DDX55-203ENST00000421670 MTFR1LQ9H019 292 aa19.85■□□□□ 0.77
DDX55-203ENST00000421670 ATF5Q9Y2D1 282 aaPredicted RBP19.85■□□□□ 0.77
DDX55-203ENST00000421670 TNRC6CQ9HCJ0 1690 aaKnown RBP19.85■□□□□ 0.77
DDX55-203ENST00000421670 POLRMTO00411 1230 aaKnown RBP19.84■□□□□ 0.77
DDX55-203ENST00000421670 MVPQ14764 893 aaKnown RBP19.84■□□□□ 0.77
DDX55-203ENST00000421670 JARID2Q92833 1246 aaPredicted RBP19.84■□□□□ 0.77
DDX55-203ENST00000421670 NTSR2O95665 410 aa19.83■□□□□ 0.77
DDX55-203ENST00000421670 PPP1R42Q7Z4L9 355 aa19.83■□□□□ 0.76
DDX55-203ENST00000421670 NBPF5PQ86XG9 351 aaPredicted RBP19.83■□□□□ 0.76
DDX55-203ENST00000421670 NUTM1Q86Y26 1132 aa19.83■□□□□ 0.76
DDX55-203ENST00000421670 TRMT112Q9UI30 125 aaKnown RBP19.83■□□□□ 0.76
DDX55-203ENST00000421670 IBTKQ9P2D0 1353 aaPredicted RBP19.82■□□□□ 0.76
DDX55-203ENST00000421670 GOLGB1Q14789 3259 aaKnown RBP19.82■□□□□ 0.76
DDX55-203ENST00000421670 GRM8O00222 908 aa19.82■□□□□ 0.76
DDX55-203ENST00000421670 UBE3BQ7Z3V4 1068 aa19.82■□□□□ 0.76
DDX55-203ENST00000421670 SYNE4Q8N205 404 aa19.82■□□□□ 0.76
DDX55-203ENST00000421670 FAM89AQ96GI7 184 aa19.82■□□□□ 0.76
DDX55-203ENST00000421670 CRBNQ96SW2 442 aa19.82■□□□□ 0.76
DDX55-203ENST00000421670 MEIS3Q99687 375 aa19.82■□□□□ 0.76
DDX55-203ENST00000421670 UTP14AQ9BVJ6 771 aaKnown RBP19.82■□□□□ 0.76
DDX55-203ENST00000421670 C9orf78Q9NZ63 289 aaPredicted RBP19.82■□□□□ 0.76
DDX55-203ENST00000421670 PARP3Q9Y6F1 533 aa19.82■□□□□ 0.76
DDX55-203ENST00000421670 ABCC12Q96J65 1359 aa19.81■□□□□ 0.76
DDX55-203ENST00000421670 SERPINB2P05120 415 aa19.81■□□□□ 0.76
DDX55-203ENST00000421670 NBPF7P0C2Y1 421 aaPredicted RBP19.81■□□□□ 0.76
DDX55-203ENST00000421670 CCDC24Q8N4L8 307 aa19.81■□□□□ 0.76
DDX55-203ENST00000421670 USP44Q9H0E7 712 aa19.81■□□□□ 0.76
DDX55-203ENST00000421670 NPHP1O15259 732 aa19.8■□□□□ 0.76
DDX55-203ENST00000421670 CNBD1Q8NA66 436 aa19.8■□□□□ 0.76
DDX55-203ENST00000421670 ZBTB38Q8NAP3 1195 aaPredicted RBP19.8■□□□□ 0.76
DDX55-203ENST00000421670 NYXQ9GZU5 481 aa19.8■□□□□ 0.76
DDX55-203ENST00000421670 KIF13BQ9NQT8 1826 aa19.8■□□□□ 0.76
DDX55-203ENST00000421670 SH3TC1Q8TE82 1336 aa19.79■□□□□ 0.76
DDX55-203ENST00000421670 COL11A2P13942 1736 aaPredicted RBP19.79■□□□□ 0.76
DDX55-203ENST00000421670 PCCAP05165 728 aaPredicted RBP19.79■□□□□ 0.76
DDX55-203ENST00000421670 ERFEQ4G0M1 354 aa19.79■□□□□ 0.76
DDX55-203ENST00000421670 PRR5LQ6MZQ0 368 aa19.79■□□□□ 0.76
DDX55-203ENST00000421670 DDX19BQ9UMR2 479 aa19.79■□□□□ 0.76
DDX55-203ENST00000421670 GTF2E1P29083 439 aaPredicted RBP19.78■□□□□ 0.76
DDX55-203ENST00000421670 CASP7P55210 303 aa19.78■□□□□ 0.76
DDX55-203ENST00000421670 UTYO14607 1347 aa19.78■□□□□ 0.76
DDX55-203ENST00000421670 H7C1W4 665 aa19.78■□□□□ 0.76
DDX55-203ENST00000421670 TPTE2Q6XPS3 522 aa19.78■□□□□ 0.76
DDX55-203ENST00000421670 ZBTB7BO15156 539 aaPredicted RBP19.77■□□□□ 0.76
DDX55-203ENST00000421670 UBTFL1P0CB47 393 aaPredicted RBP19.77■□□□□ 0.76
DDX55-203ENST00000421670 POLD1P28340 1107 aa19.77■□□□□ 0.76
DDX55-203ENST00000421670 PTGER2P43116 358 aa19.77■□□□□ 0.76
DDX55-203ENST00000421670 SGIP1Q9BQI5 828 aa19.77■□□□□ 0.76
DDX55-203ENST00000421670 CACNA1SQ13698 1873 aa19.77■□□□□ 0.76
DDX55-203ENST00000421670 TAF1P21675 1872 aa19.76■□□□□ 0.75
DDX55-203ENST00000421670 HCLS1P14317 486 aaPredicted RBP19.76■□□□□ 0.75
DDX55-203ENST00000421670 EXOC6Q8TAG9 804 aa19.76■□□□□ 0.75
DDX55-203ENST00000421670 SPEF2Q9C093 1822 aa19.75■□□□□ 0.75
DDX55-203ENST00000421670 CDHR2Q9BYE9 1310 aa19.75■□□□□ 0.75
DDX55-203ENST00000421670 IRS4O14654 1257 aaPredicted RBP19.75■□□□□ 0.75
DDX55-203ENST00000421670 ST5P78524 1137 aa19.75■□□□□ 0.75
DDX55-203ENST00000421670 SUCLG2Q96I99 432 aa19.75■□□□□ 0.75
DDX55-203ENST00000421670 C1orf115Q9H7X2 142 aa19.75■□□□□ 0.75
DDX55-203ENST00000421670 KIAA1551Q9HCM1 1747 aa19.75■□□□□ 0.75
DDX55-203ENST00000421670 C10orf71Q711Q0 1435 aa19.74■□□□□ 0.75
DDX55-203ENST00000421670 GNAI3P08754 354 aa19.74■□□□□ 0.75
DDX55-203ENST00000421670 SPON1Q9HCB6 807 aa19.74■□□□□ 0.75
DDX55-203ENST00000421670 DLEC1Q9Y238 1755 aa19.74■□□□□ 0.75
DDX55-203ENST00000421670 RIC1Q4ADV7 1423 aa19.74■□□□□ 0.75
DDX55-203ENST00000421670 KAZALD1Q96I82 304 aa19.74■□□□□ 0.75
DDX55-203ENST00000421670 LRRFIP2Q9Y608 721 aaKnown RBP19.74■□□□□ 0.75
DDX55-203ENST00000421670 NEFLP07196 543 aa19.73■□□□□ 0.75
DDX55-203ENST00000421670 ZBTB40Q9NUA8 1239 aa19.73■□□□□ 0.75
DDX55-203ENST00000421670 EPHA10Q5JZY3 1008 aa19.72■□□□□ 0.75
DDX55-203ENST00000421670 C3orf67Q6ZVT6 689 aa19.72■□□□□ 0.75
DDX55-203ENST00000421670 BICC1Q9H694 974 aaKnown RBP19.72■□□□□ 0.75
DDX55-203ENST00000421670 GNAI2P04899 355 aa19.71■□□□□ 0.75
DDX55-203ENST00000421670 FOXO4P98177 505 aa19.7■□□□□ 0.74
DDX55-203ENST00000421670 SLC10A5Q5PT55 438 aa19.7■□□□□ 0.74
DDX55-203ENST00000421670 LRP5O75197 1615 aa19.7■□□□□ 0.74
DDX55-203ENST00000421670 COL4A1P02462 1669 aa19.7■□□□□ 0.74
DDX55-203ENST00000421670 PDE8AO60658 829 aa19.7■□□□□ 0.74
DDX55-203ENST00000421670 CTSWP56202 376 aa19.7■□□□□ 0.74
DDX55-203ENST00000421670 CCDC85AQ96PX6 553 aaPredicted RBP19.7■□□□□ 0.74
DDX55-203ENST00000421670 PLA2G12BQ9BX93 195 aa19.7■□□□□ 0.74
DDX55-203ENST00000421670 CHMP4BQ9H444 224 aaKnown RBP19.7■□□□□ 0.74
DDX55-203ENST00000421670 ANKRD44Q8N8A2 993 aa19.69■□□□□ 0.74
DDX55-203ENST00000421670 BRIP1Q9BX63 1249 aa19.69■□□□□ 0.74
DDX55-203ENST00000421670 BRCA1P38398 1863 aaKnown RBP19.69■□□□□ 0.74
DDX55-203ENST00000421670 KLHL34Q8N239 644 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms