RNA–Protein interactions for RNA: ENST00000417030.2

CKLF-205, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-205ENST00000417030 SLC4A2P04920 1241 aa28.05■■■□□ 2.08
CKLF-205ENST00000417030 NPR1P16066 1061 aa28.05■■■□□ 2.08
CKLF-205ENST00000417030 IBTKQ9P2D0 1353 aaPredicted RBP28.05■■■□□ 2.08
CKLF-205ENST00000417030 TCIRG1Q13488 830 aa28.04■■■□□ 2.08
CKLF-205ENST00000417030 NUTM1Q86Y26 1132 aa28.04■■■□□ 2.08
CKLF-205ENST00000417030 ERFEQ4G0M1 354 aa28.03■■■□□ 2.08
CKLF-205ENST00000417030 C9orf131Q5VYM1 1079 aa28.02■■■□□ 2.08
CKLF-205ENST00000417030 UTP14AQ9BVJ6 771 aaKnown RBP28.02■■■□□ 2.08
CKLF-205ENST00000417030 NTSR2O95665 410 aa28.01■■■□□ 2.07
CKLF-205ENST00000417030 DDX58O95786 925 aaKnown RBP28.01■■■□□ 2.07
CKLF-205ENST00000417030 C21orf2O43822 256 aa28■■■□□ 2.07
CKLF-205ENST00000417030 ALDH1B1P30837 517 aa28■■■□□ 2.07
CKLF-205ENST00000417030 PRPF40BQ6NWY9 871 aaKnown RBP28■■■□□ 2.07
CKLF-205ENST00000417030 G2E3Q7L622 706 aa28■■■□□ 2.07
CKLF-205ENST00000417030 RIC3Q7Z5B4 369 aa28■■■□□ 2.07
CKLF-205ENST00000417030 COL11A2P13942 1736 aaPredicted RBP27.99■■■□□ 2.07
CKLF-205ENST00000417030 SOGA3Q5TF21 947 aa27.99■■■□□ 2.07
CKLF-205ENST00000417030 ZNF428Q96B54 188 aa27.99■■■□□ 2.07
CKLF-205ENST00000417030 GPBP1L1Q9HC44 474 aaPredicted RBP27.99■■■□□ 2.07
CKLF-205ENST00000417030 RNF123Q5XPI4 1314 aa27.98■■■□□ 2.07
CKLF-205ENST00000417030 CT47B1P0C2W7 299 aaPredicted RBP27.98■■■□□ 2.07
CKLF-205ENST00000417030 CRY2Q49AN0 593 aa27.98■■■□□ 2.07
CKLF-205ENST00000417030 NLRP10Q86W26 655 aa27.98■■■□□ 2.07
CKLF-205ENST00000417030 RNF181Q9P0P0 153 aa27.98■■■□□ 2.07
CKLF-205ENST00000417030 ZNF219Q9P2Y4 722 aaPredicted RBP27.98■■■□□ 2.07
CKLF-205ENST00000417030 FLIIQ13045 1269 aa27.97■■■□□ 2.07
CKLF-205ENST00000417030 SLC10A5Q5PT55 438 aa27.97■■■□□ 2.07
CKLF-205ENST00000417030 RIC1Q4ADV7 1423 aa27.97■■■□□ 2.07
CKLF-205ENST00000417030 LMNB1P20700 586 aa27.96■■■□□ 2.07
CKLF-205ENST00000417030 KSR2Q6VAB6 950 aa27.96■■■□□ 2.07
CKLF-205ENST00000417030 ABCC12Q96J65 1359 aa27.96■■■□□ 2.07
CKLF-205ENST00000417030 ZNF526Q8TF50 670 aaPredicted RBP27.95■■■□□ 2.06
CKLF-205ENST00000417030 NLRP3Q96P20 1036 aa27.95■■■□□ 2.06
CKLF-205ENST00000417030 ISCA1Q9BUE6 129 aa27.95■■■□□ 2.06
CKLF-205ENST00000417030 PI4KAP2A4QPH2 592 aa27.94■■■□□ 2.06
CKLF-205ENST00000417030 RASSF7Q02833 373 aa27.94■■■□□ 2.06
CKLF-205ENST00000417030 PI4KAP1Q8N8J0 262 aa27.94■■■□□ 2.06
CKLF-205ENST00000417030 RPGRQ92834 1020 aaKnown RBP27.94■■■□□ 2.06
CKLF-205ENST00000417030 TRMT112Q9UI30 125 aaKnown RBP27.94■■■□□ 2.06
CKLF-205ENST00000417030 MAP3K2Q9Y2U5 619 aa27.94■■■□□ 2.06
CKLF-205ENST00000417030 NFKBIEO00221 500 aa27.93■■■□□ 2.06
CKLF-205ENST00000417030 HOXA10P31260 410 aaPredicted RBP27.93■■■□□ 2.06
CKLF-205ENST00000417030 TRIM28Q13263 835 aaKnown RBP27.93■■■□□ 2.06
CKLF-205ENST00000417030 C7orf43Q8WVR3 580 aa27.93■■■□□ 2.06
CKLF-205ENST00000417030 METTL22Q9BUU2 404 aaPredicted RBP27.93■■■□□ 2.06
CKLF-205ENST00000417030 SLX4Q8IY92 1834 aa27.92■■■□□ 2.06
CKLF-205ENST00000417030 FKBP5Q13451 457 aaPredicted RBP27.92■■■□□ 2.06
CKLF-205ENST00000417030 ALDH1L2Q3SY69 923 aa27.92■■■□□ 2.06
CKLF-205ENST00000417030 ATP5J2-PTCD1G3V325 749 aa27.91■■■□□ 2.06
CKLF-205ENST00000417030 MRPL50Q8N5N7 158 aaKnown RBP27.91■■■□□ 2.06
CKLF-205ENST00000417030 SSH1Q8WYL5 1049 aa27.91■■■□□ 2.06
CKLF-205ENST00000417030 RBM17Q96I25 401 aaKnown RBP27.91■■■□□ 2.06
CKLF-205ENST00000417030 MYD88Q99836 296 aa27.91■■■□□ 2.06
CKLF-205ENST00000417030 SH3TC1Q8TE82 1336 aa27.91■■■□□ 2.06
CKLF-205ENST00000417030 SBF1O95248 1867 aa27.9■■■□□ 2.06
CKLF-205ENST00000417030 LTBP3Q9NS15 1303 aa27.9■■■□□ 2.06
CKLF-205ENST00000417030 ZC3H4Q9UPT8 1303 aaKnown RBP27.9■■■□□ 2.06
CKLF-205ENST00000417030 CCDC93Q567U6 631 aa27.89■■■□□ 2.06
CKLF-205ENST00000417030 CRAMP1Q96RY5 1269 aa27.89■■■□□ 2.06
CKLF-205ENST00000417030 TAOK3Q9H2K8 898 aa27.89■■■□□ 2.06
CKLF-205ENST00000417030 RTKN2Q8IZC4 609 aa27.88■■■□□ 2.05
CKLF-205ENST00000417030 PRELPP51888 382 aa27.87■■■□□ 2.05
CKLF-205ENST00000417030 DNAAF4Q8WXU2 420 aa27.87■■■□□ 2.05
CKLF-205ENST00000417030 TNRC6CQ9HCJ0 1690 aaKnown RBP27.87■■■□□ 2.05
CKLF-205ENST00000417030 HCLS1P14317 486 aaPredicted RBP27.86■■■□□ 2.05
CKLF-205ENST00000417030 C1QTNF8P60827 252 aa27.86■■■□□ 2.05
CKLF-205ENST00000417030 NEXNQ0ZGT2 675 aa27.86■■■□□ 2.05
CKLF-205ENST00000417030 CC2D2BQ6DHV5 1058 aa27.86■■■□□ 2.05
CKLF-205ENST00000417030 C3orf67Q6ZVT6 689 aa27.86■■■□□ 2.05
CKLF-205ENST00000417030 CCDC191Q8NCU4 936 aa27.86■■■□□ 2.05
CKLF-205ENST00000417030 BCL2L13Q9BXK5 485 aa27.86■■■□□ 2.05
CKLF-205ENST00000417030 SYNE4Q8N205 404 aa27.85■■■□□ 2.05
CKLF-205ENST00000417030 SMC4Q9NTJ3 1288 aa27.85■■■□□ 2.05
CKLF-205ENST00000417030 KDM2BQ8NHM5 1336 aa27.85■■■□□ 2.05
CKLF-205ENST00000417030 CACNA1SQ13698 1873 aa27.85■■■□□ 2.05
CKLF-205ENST00000417030 FER1L6Q2WGJ9 1857 aa27.85■■■□□ 2.05
CKLF-205ENST00000417030 IGKV5-2P06315 115 aa27.84■■■□□ 2.05
CKLF-205ENST00000417030 RARSP54136 660 aaKnown RBP27.84■■■□□ 2.05
CKLF-205ENST00000417030 GRIPAP1Q4V328 841 aa27.84■■■□□ 2.05
CKLF-205ENST00000417030 FAM89AQ96GI7 184 aa27.83■■■□□ 2.05
CKLF-205ENST00000417030 CWC25Q9NXE8 425 aaPredicted RBP27.83■■■□□ 2.05
CKLF-205ENST00000417030 PTPRCP08575 1304 aa27.83■■■□□ 2.05
CKLF-205ENST00000417030 F6X3S4 739 aa27.82■■■□□ 2.04
CKLF-205ENST00000417030 BRPF1P55201 1214 aaPredicted RBP27.82■■■□□ 2.04
CKLF-205ENST00000417030 FKBP4Q02790 459 aaKnown RBP eCLIP27.82■■■□□ 2.04
CKLF-205ENST00000417030 DDX60Q8IY21 1712 aaKnown RBP27.81■■■□□ 2.04
CKLF-205ENST00000417030 HSP90B1P14625 803 aaKnown RBP27.81■■■□□ 2.04
CKLF-205ENST00000417030 TMX4Q9H1E5 349 aaPredicted RBP27.81■■■□□ 2.04
CKLF-205ENST00000417030 LAMB2P55268 1798 aa27.81■■■□□ 2.04
CKLF-205ENST00000417030 NEURL1BA8MQ27 555 aa27.8■■■□□ 2.04
CKLF-205ENST00000417030 BBOX1O75936 387 aa27.8■■■□□ 2.04
CKLF-205ENST00000417030 OLFM4Q6UX06 510 aa27.8■■■□□ 2.04
CKLF-205ENST00000417030 DDX46Q7L014 1031 aaKnown RBP27.8■■■□□ 2.04
CKLF-205ENST00000417030 ZBTB38Q8NAP3 1195 aaPredicted RBP27.8■■■□□ 2.04
CKLF-205ENST00000417030 LINS1Q8NG48 757 aa27.8■■■□□ 2.04
CKLF-205ENST00000417030 CCDC88AQ3V6T2 1871 aa27.79■■■□□ 2.04
CKLF-205ENST00000417030 GLTPD2A6NH11 291 aa27.79■■■□□ 2.04
CKLF-205ENST00000417030 KIF3CO14782 793 aa27.79■■■□□ 2.04
CKLF-205ENST00000417030 PPEF1O14829 653 aaPredicted RBP27.79■■■□□ 2.04
CKLF-205ENST00000417030 PCCAP05165 728 aaPredicted RBP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms