RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 ATP5JP18859 108 aa13.4□□□□□ -0.26
TRAPPC12-205ENST00000416918 RFX5P48382 616 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-205ENST00000416918 PTPN12Q05209 780 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-205ENST00000416918 NFKBIBQ15653 356 aa13.4□□□□□ -0.26
TRAPPC12-205ENST00000416918 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-205ENST00000416918 TTLL7Q6ZT98 887 aa13.4□□□□□ -0.26
TRAPPC12-205ENST00000416918 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-205ENST00000416918 DIAPH3Q9NSV4 1193 aa13.4□□□□□ -0.26
TRAPPC12-205ENST00000416918 ADAMTS2O95450 1211 aa13.39□□□□□ -0.27
TRAPPC12-205ENST00000416918 FOXO4P98177 505 aa13.39□□□□□ -0.27
TRAPPC12-205ENST00000416918 VPS72Q15906 364 aa13.39□□□□□ -0.27
TRAPPC12-205ENST00000416918 LMBR1LQ6UX01 489 aa13.39□□□□□ -0.27
TRAPPC12-205ENST00000416918 DNAJC10Q8IXB1 793 aa13.39□□□□□ -0.27
TRAPPC12-205ENST00000416918 ZBTB38Q8NAP3 1195 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-205ENST00000416918 AKAP2Q9Y2D5 859 aa13.39□□□□□ -0.27
TRAPPC12-205ENST00000416918 UBAP1LF5GYI3 381 aa13.38□□□□□ -0.27
TRAPPC12-205ENST00000416918 ATP5J2-PTCD1G3V325 749 aa13.38□□□□□ -0.27
TRAPPC12-205ENST00000416918 PRIM1P49642 420 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-205ENST00000416918 NBR1Q14596 966 aa13.38□□□□□ -0.27
TRAPPC12-205ENST00000416918 ANO2Q9NQ90 1003 aa13.38□□□□□ -0.27
TRAPPC12-205ENST00000416918 SNRKQ9NRH2 765 aa13.38□□□□□ -0.27
TRAPPC12-205ENST00000416918 PA2G4Q9UQ80 394 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-205ENST00000416918 CCDC57Q2TAC2 916 aa13.37□□□□□ -0.27
TRAPPC12-205ENST00000416918 TNNI3KQ59H18 835 aa13.37□□□□□ -0.27
TRAPPC12-205ENST00000416918 EPHA10Q5JZY3 1008 aa13.37□□□□□ -0.27
TRAPPC12-205ENST00000416918 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-205ENST00000416918 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAPPC12-205ENST00000416918 EAF2Q96CJ1 260 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-205ENST00000416918 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
TRAPPC12-205ENST00000416918 ZBTB3Q9H5J0 574 aa13.37□□□□□ -0.27
TRAPPC12-205ENST00000416918 FPGT-TNNI3KV9GXZ4 949 aa13.37□□□□□ -0.27
TRAPPC12-205ENST00000416918 ARFGEF2Q9Y6D5 1785 aa13.37□□□□□ -0.27
TRAPPC12-205ENST00000416918 EYA2O00167 538 aa13.36□□□□□ -0.27
TRAPPC12-205ENST00000416918 CSF1RP07333 972 aa13.36□□□□□ -0.27
TRAPPC12-205ENST00000416918 PDIA4P13667 645 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-205ENST00000416918 HSPA4P34932 840 aa13.36□□□□□ -0.27
TRAPPC12-205ENST00000416918 NUCB2P80303 420 aa13.36□□□□□ -0.27
TRAPPC12-205ENST00000416918 PARP10Q53GL7 1025 aa13.36□□□□□ -0.27
TRAPPC12-205ENST00000416918 DDIT3P35638 169 aa13.35□□□□□ -0.27
TRAPPC12-205ENST00000416918 PIP4K2BP78356 416 aa13.35□□□□□ -0.27
TRAPPC12-205ENST00000416918 GBP4Q96PP9 640 aa13.35□□□□□ -0.27
TRAPPC12-205ENST00000416918 TM6SF1Q9BZW5 370 aa13.35□□□□□ -0.27
TRAPPC12-205ENST00000416918 SLKQ9H2G2 1235 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-205ENST00000416918 CCDC87Q9NVE4 849 aa13.35□□□□□ -0.27
TRAPPC12-205ENST00000416918 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
TRAPPC12-205ENST00000416918 NRAPQ86VF7 1730 aa13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 TOGARAM1Q9Y4F4 1720 aa13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 ZKSCAN1P17029 563 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 IFIT5Q13325 482 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 RNF20Q5VTR2 975 aa13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 INTS4Q96HW7 963 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 NGLY1Q96IV0 654 aa13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 ZNF652Q9Y2D9 606 aa13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 CCDC9Q9Y3X0 531 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-205ENST00000416918 ABCC12Q96J65 1359 aa13.33□□□□□ -0.27
TRAPPC12-205ENST00000416918 LOC102724428A0A0B4J2F2 783 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 NUTM2BA6NNL0 878 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 NUTM2EB1AL46 878 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 SIK1P57059 783 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 TFCP2Q12800 502 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 TSHZ3Q63HK5 1081 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 CLEC4GQ6UXB4 293 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 CLEC17AQ6ZS10 378 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 NLRP10Q86W26 655 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 DZIP3Q86Y13 1208 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 NUTM2AQ8IVF1 878 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 MARCH10Q8NA82 808 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 KCNB2Q92953 911 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 HAUS7Q99871 368 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 SIL1Q9H173 461 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 WNK3Q9BYP7 1800 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 NUP188Q5SRE5 1749 aa13.33□□□□□ -0.28
TRAPPC12-205ENST00000416918 TUBGCP6Q96RT7 1819 aa13.32□□□□□ -0.28
TRAPPC12-205ENST00000416918 CICQ96RK0 1608 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC12-205ENST00000416918 PDE8AO60658 829 aa13.32□□□□□ -0.28
TRAPPC12-205ENST00000416918 PSMA5P28066 241 aa13.32□□□□□ -0.28
TRAPPC12-205ENST00000416918 NEK4P51957 841 aa13.32□□□□□ -0.28
TRAPPC12-205ENST00000416918 LSG1Q9H089 658 aaKnown RBP13.32□□□□□ -0.28
TRAPPC12-205ENST00000416918 CCDC8Q9H0W5 538 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC12-205ENST00000416918 HMG20BQ9P0W2 317 aa13.32□□□□□ -0.28
TRAPPC12-205ENST00000416918 CHMP3Q9Y3E7 222 aa13.32□□□□□ -0.28
TRAPPC12-205ENST00000416918 ITGB4P16144 1822 aa13.32□□□□□ -0.28
TRAPPC12-205ENST00000416918 GOLGA6L22H0YM25 854 aa13.31□□□□□ -0.28
TRAPPC12-205ENST00000416918 ATP6V1AP38606 617 aa13.31□□□□□ -0.28
TRAPPC12-205ENST00000416918 SKOR2Q2VWA4 1001 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-205ENST00000416918 TAF7LQ5H9L4 462 aa13.31□□□□□ -0.28
TRAPPC12-205ENST00000416918 ATG9AQ7Z3C6 839 aa13.31□□□□□ -0.28
TRAPPC12-205ENST00000416918 ZNF34Q8IZ26 560 aa13.31□□□□□ -0.28
TRAPPC12-205ENST00000416918 FSD1Q9BTV5 496 aa13.31□□□□□ -0.28
TRAPPC12-205ENST00000416918 AFDNP55196 1824 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-205ENST00000416918 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
TRAPPC12-205ENST00000416918 KRT32Q14532 448 aa13.3□□□□□ -0.28
TRAPPC12-205ENST00000416918 RAB3GAP1Q15042 981 aa13.3□□□□□ -0.28
TRAPPC12-205ENST00000416918 TSGA10IPQ3SY00 556 aa13.3□□□□□ -0.28
TRAPPC12-205ENST00000416918 CCDC158Q5M9N0 1113 aa13.3□□□□□ -0.28
TRAPPC12-205ENST00000416918 RC3H1Q5TC82 1133 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms