RNA–Protein interactions for RNA: ENST00000416445.6

CALCOCO2-203, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CALCOCO2, Length 1,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-203ENST00000416445 MBIPQ9NS73 344 aa12.59□□□□□ -0.39
CALCOCO2-203ENST00000416445 PDZRN3Q9UPQ7 1066 aa12.59□□□□□ -0.39
CALCOCO2-203ENST00000416445 ERBB4Q15303 1308 aa12.59□□□□□ -0.39
CALCOCO2-203ENST00000416445 KDM2BQ8NHM5 1336 aa12.59□□□□□ -0.39
CALCOCO2-203ENST00000416445 LTBP3Q9NS15 1303 aa12.59□□□□□ -0.39
CALCOCO2-203ENST00000416445 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
CALCOCO2-203ENST00000416445 ZNF853P0CG23 659 aa12.58□□□□□ -0.4
CALCOCO2-203ENST00000416445 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
CALCOCO2-203ENST00000416445 POTEJP0CG39 1038 aa12.58□□□□□ -0.4
CALCOCO2-203ENST00000416445 LMOD3Q0VAK6 560 aa12.58□□□□□ -0.4
CALCOCO2-203ENST00000416445 DNAJC5GQ8N7S2 189 aa12.58□□□□□ -0.4
CALCOCO2-203ENST00000416445 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
CALCOCO2-203ENST00000416445 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
CALCOCO2-203ENST00000416445 ZNF541Q9H0D2 1346 aa12.58□□□□□ -0.4
CALCOCO2-203ENST00000416445 LTBP1Q14766 1721 aa12.57□□□□□ -0.4
CALCOCO2-203ENST00000416445 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
CALCOCO2-203ENST00000416445 GTF2E1P29083 439 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO2-203ENST00000416445 NLRP10Q86W26 655 aa12.56□□□□□ -0.4
CALCOCO2-203ENST00000416445 DDX21Q9NR30 783 aaKnown RBP eCLIP12.56□□□□□ -0.4
CALCOCO2-203ENST00000416445 ZC3H4Q9UPT8 1303 aaKnown RBP12.56□□□□□ -0.4
CALCOCO2-203ENST00000416445 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO2-203ENST00000416445 RIC1Q4ADV7 1423 aa12.56□□□□□ -0.4
CALCOCO2-203ENST00000416445 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
CALCOCO2-203ENST00000416445 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
CALCOCO2-203ENST00000416445 CCDC93Q567U6 631 aa12.55□□□□□ -0.4
CALCOCO2-203ENST00000416445 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
CALCOCO2-203ENST00000416445 C8orf58Q8NAV2 365 aa12.55□□□□□ -0.4
CALCOCO2-203ENST00000416445 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
CALCOCO2-203ENST00000416445 HOXA10P31260 410 aaPredicted RBP12.54□□□□□ -0.4
CALCOCO2-203ENST00000416445 FKBP4Q02790 459 aaKnown RBP eCLIP12.54□□□□□ -0.4
CALCOCO2-203ENST00000416445 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
CALCOCO2-203ENST00000416445 NYXQ9GZU5 481 aa12.54□□□□□ -0.4
CALCOCO2-203ENST00000416445 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
CALCOCO2-203ENST00000416445 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
CALCOCO2-203ENST00000416445 C16orf71Q8IYS4 520 aaPredicted RBP12.54□□□□□ -0.4
CALCOCO2-203ENST00000416445 TSPYL6Q8N831 410 aa12.54□□□□□ -0.4
CALCOCO2-203ENST00000416445 PHAXQ9H814 394 aaKnown RBP12.54□□□□□ -0.4
CALCOCO2-203ENST00000416445 SCN4AP35499 1836 aa12.53□□□□□ -0.4
CALCOCO2-203ENST00000416445 ABCC4O15439 1325 aa12.53□□□□□ -0.4
CALCOCO2-203ENST00000416445 APLP1P51693 650 aa12.53□□□□□ -0.4
CALCOCO2-203ENST00000416445 TCIRG1Q13488 830 aa12.53□□□□□ -0.4
CALCOCO2-203ENST00000416445 SLC10A5Q5PT55 438 aa12.53□□□□□ -0.4
CALCOCO2-203ENST00000416445 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
CALCOCO2-203ENST00000416445 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
CALCOCO2-203ENST00000416445 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
CALCOCO2-203ENST00000416445 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.4
CALCOCO2-203ENST00000416445 ALDH1B1P30837 517 aa12.52□□□□□ -0.41
CALCOCO2-203ENST00000416445 FSTL1Q12841 308 aa12.52□□□□□ -0.41
CALCOCO2-203ENST00000416445 PARP10Q53GL7 1025 aa12.52□□□□□ -0.41
CALCOCO2-203ENST00000416445 RPGRQ92834 1020 aaKnown RBP12.52□□□□□ -0.41
CALCOCO2-203ENST00000416445 IFT57Q9NWB7 429 aa12.52□□□□□ -0.41
CALCOCO2-203ENST00000416445 LRRC37AA6NMS7 1700 aa12.51□□□□□ -0.41
CALCOCO2-203ENST00000416445 PPEF1O14829 653 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO2-203ENST00000416445 IARSP41252 1262 aaKnown RBP12.51□□□□□ -0.41
CALCOCO2-203ENST00000416445 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO2-203ENST00000416445 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
CALCOCO2-203ENST00000416445 PPP1R42Q7Z4L9 355 aa12.51□□□□□ -0.41
CALCOCO2-203ENST00000416445 JARID2Q92833 1246 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO2-203ENST00000416445 CRAMP1Q96RY5 1269 aa12.51□□□□□ -0.41
CALCOCO2-203ENST00000416445 ISCA1Q9BUE6 129 aa12.51□□□□□ -0.41
CALCOCO2-203ENST00000416445 ZNF316A6NFI3 1004 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-203ENST00000416445 DPY19L2Q6NUT2 758 aa12.5□□□□□ -0.41
CALCOCO2-203ENST00000416445 SMC1BQ8NDV3 1235 aa12.5□□□□□ -0.41
CALCOCO2-203ENST00000416445 PLBD2Q8NHP8 589 aa12.5□□□□□ -0.41
CALCOCO2-203ENST00000416445 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
CALCOCO2-203ENST00000416445 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
CALCOCO2-203ENST00000416445 TRMT112Q9UI30 125 aaKnown RBP12.5□□□□□ -0.41
CALCOCO2-203ENST00000416445 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
CALCOCO2-203ENST00000416445 FZD9O00144 591 aa12.49□□□□□ -0.41
CALCOCO2-203ENST00000416445 HOXB7P09629 217 aa12.49□□□□□ -0.41
CALCOCO2-203ENST00000416445 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
CALCOCO2-203ENST00000416445 RTKN2Q8IZC4 609 aa12.49□□□□□ -0.41
CALCOCO2-203ENST00000416445 NLRP3Q96P20 1036 aa12.49□□□□□ -0.41
CALCOCO2-203ENST00000416445 PSMD1Q99460 953 aa12.49□□□□□ -0.41
CALCOCO2-203ENST00000416445 DBF4Q9UBU7 674 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO2-203ENST00000416445 GNAI1P63096 354 aa12.48□□□□□ -0.41
CALCOCO2-203ENST00000416445 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO2-203ENST00000416445 TAF1DQ9H5J8 278 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO2-203ENST00000416445 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
CALCOCO2-203ENST00000416445 SH3TC1Q8TE82 1336 aa12.48□□□□□ -0.41
CALCOCO2-203ENST00000416445 AOC3Q16853 763 aa12.47□□□□□ -0.41
CALCOCO2-203ENST00000416445 G2E3Q7L622 706 aa12.47□□□□□ -0.41
CALCOCO2-203ENST00000416445 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
CALCOCO2-203ENST00000416445 CELF1Q92879 486 aaKnown RBP12.47□□□□□ -0.41
CALCOCO2-203ENST00000416445 HYPKQ9NX55 129 aa12.47□□□□□ -0.41
CALCOCO2-203ENST00000416445 SALL2Q9Y467 1007 aaPredicted RBP12.47□□□□□ -0.41
CALCOCO2-203ENST00000416445 ATP6V0A2Q9Y487 856 aa12.47□□□□□ -0.41
CALCOCO2-203ENST00000416445 HOXD11P31277 338 aaPredicted RBP12.46□□□□□ -0.41
CALCOCO2-203ENST00000416445 FMR1Q06787 632 aaKnown RBP eCLIP12.46□□□□□ -0.41
CALCOCO2-203ENST00000416445 HSP90AB3PQ58FF7 597 aa12.46□□□□□ -0.41
CALCOCO2-203ENST00000416445 KLRG1Q96E93 195 aa12.46□□□□□ -0.41
CALCOCO2-203ENST00000416445 MRS2Q9HD23 443 aa12.46□□□□□ -0.41
CALCOCO2-203ENST00000416445 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
CALCOCO2-203ENST00000416445 SCN9AQ15858 1988 aa12.46□□□□□ -0.41
CALCOCO2-203ENST00000416445 GPR101Q96P66 508 aaPredicted RBP12.45□□□□□ -0.42
CALCOCO2-203ENST00000416445 MYD88Q99836 296 aa12.45□□□□□ -0.42
CALCOCO2-203ENST00000416445 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
CALCOCO2-203ENST00000416445 GJA3Q9Y6H8 435 aa12.45□□□□□ -0.42
CALCOCO2-203ENST00000416445 SHTN1A0MZ66 631 aa12.45□□□□□ -0.42
CALCOCO2-203ENST00000416445 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms