RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 ANKRD36CQ5JPF3 1778 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 C4BP0C0L5 1744 aa12.65□□□□□ -0.38
DEPDC4-203ENST00000416321 SRGAP3O43295 1099 aa12.64□□□□□ -0.39
DEPDC4-203ENST00000416321 RGS3P49796 1198 aa12.64□□□□□ -0.39
DEPDC4-203ENST00000416321 TRIM28Q13263 835 aaKnown RBP12.64□□□□□ -0.39
DEPDC4-203ENST00000416321 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
DEPDC4-203ENST00000416321 SIRT2Q8IXJ6 389 aa12.64□□□□□ -0.39
DEPDC4-203ENST00000416321 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
DEPDC4-203ENST00000416321 NUP98P52948 1817 aa12.63□□□□□ -0.39
DEPDC4-203ENST00000416321 PLSCR1O15162 318 aa12.63□□□□□ -0.39
DEPDC4-203ENST00000416321 ZPR1O75312 459 aa12.63□□□□□ -0.39
DEPDC4-203ENST00000416321 GPTP24298 496 aa12.63□□□□□ -0.39
DEPDC4-203ENST00000416321 SF3B2Q13435 895 aaKnown RBP12.63□□□□□ -0.39
DEPDC4-203ENST00000416321 HLFQ16534 295 aa12.63□□□□□ -0.39
DEPDC4-203ENST00000416321 TXNRD1Q16881 649 aa12.63□□□□□ -0.39
DEPDC4-203ENST00000416321 ANKRD45Q5TZF3 282 aa12.63□□□□□ -0.39
DEPDC4-203ENST00000416321 SUCLG2Q96I99 432 aa12.63□□□□□ -0.39
DEPDC4-203ENST00000416321 DCTPP1Q9H773 170 aa12.63□□□□□ -0.39
DEPDC4-203ENST00000416321 H7C1W4 665 aa12.62□□□□□ -0.39
DEPDC4-203ENST00000416321 RGL2O15211 777 aa12.62□□□□□ -0.39
DEPDC4-203ENST00000416321 CAMTA2O94983 1202 aa12.62□□□□□ -0.39
DEPDC4-203ENST00000416321 RFC4P35249 363 aa12.62□□□□□ -0.39
DEPDC4-203ENST00000416321 OS9Q13438 667 aaPredicted RBP12.62□□□□□ -0.39
DEPDC4-203ENST00000416321 PARP10Q53GL7 1025 aa12.62□□□□□ -0.39
DEPDC4-203ENST00000416321 HSP90AB4PQ58FF6 505 aa12.62□□□□□ -0.39
DEPDC4-203ENST00000416321 TRAPPC3LQ5T215 181 aa12.62□□□□□ -0.39
DEPDC4-203ENST00000416321 BICC1Q9H694 974 aaKnown RBP12.62□□□□□ -0.39
DEPDC4-203ENST00000416321 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 PNMA6EA0A0J9YXQ4 647 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 PHF14O94880 888 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 PCCAP05165 728 aaPredicted RBP12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 HSP90B1P14625 803 aaKnown RBP12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 NUCB1Q02818 461 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 MTX1Q13505 466 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 RTL5Q5HYW3 569 aaPredicted RBP12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 ILDR1Q86SU0 546 aaPredicted RBP12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 NLRP10Q86W26 655 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 CHD1LQ86WJ1 897 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 ZBTB38Q8NAP3 1195 aaPredicted RBP12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 SSH3Q8TE77 659 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 JARID2Q92833 1246 aaPredicted RBP12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 NARFQ9UHQ1 456 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 TRMT112Q9UI30 125 aaKnown RBP12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 CHMP3Q9Y3E7 222 aa12.61□□□□□ -0.39
DEPDC4-203ENST00000416321 TNS1Q9HBL0 1735 aaKnown RBP12.6□□□□□ -0.39
DEPDC4-203ENST00000416321 APBB1O00213 710 aa12.6□□□□□ -0.39
DEPDC4-203ENST00000416321 SURF6O75683 361 aaKnown RBP12.6□□□□□ -0.39
DEPDC4-203ENST00000416321 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
DEPDC4-203ENST00000416321 LNPKQ9C0E8 428 aa12.6□□□□□ -0.39
DEPDC4-203ENST00000416321 SCN7AQ01118 1682 aa12.6□□□□□ -0.39
DEPDC4-203ENST00000416321 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
DEPDC4-203ENST00000416321 RGPD4Q7Z3J3 1758 aa12.59□□□□□ -0.39
DEPDC4-203ENST00000416321 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
DEPDC4-203ENST00000416321 AKT1S1Q96B36 256 aa12.59□□□□□ -0.39
DEPDC4-203ENST00000416321 UTP14AQ9BVJ6 771 aaKnown RBP12.59□□□□□ -0.39
DEPDC4-203ENST00000416321 BCL11AQ9H165 835 aa12.59□□□□□ -0.39
DEPDC4-203ENST00000416321 EXOC6BQ9Y2D4 811 aa12.59□□□□□ -0.39
DEPDC4-203ENST00000416321 CDHR2Q9BYE9 1310 aa12.59□□□□□ -0.39
DEPDC4-203ENST00000416321 FAM177BA6PVY3 158 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 RAB11FIP3O75154 756 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 SSFA2P28290 1259 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 BAG6P46379 1132 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 CASP7P55210 303 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 USPL1Q5W0Q7 1092 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 SKAP1Q86WV1 359 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 ERC1Q8IUD2 1116 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 ARHGEF1Q92888 912 aaKnown RBP12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 FAM89AQ96GI7 184 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 LRRCC1Q9C099 1032 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 UBN2Q6ZU65 1347 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 SH3TC1Q8TE82 1336 aa12.58□□□□□ -0.4
DEPDC4-203ENST00000416321 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 IRS4O14654 1257 aaPredicted RBP12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 NPHP1O15259 732 aa12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 GTF2E1P29083 439 aaPredicted RBP12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 G3BP1Q13283 466 aaKnown RBP eCLIP12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 RABL6Q3YEC7 729 aaPredicted RBP12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 BICDL1Q6ZP65 573 aa12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 KAZALD1Q96I82 304 aa12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 SETDB2Q96T68 719 aa12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 TFCP2L1Q9NZI6 479 aa12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 USP42Q9H9J4 1324 aaKnown RBP12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 C4AP0C0L4 1744 aa12.57□□□□□ -0.4
DEPDC4-203ENST00000416321 TAF7LQ5H9L4 462 aa12.56□□□□□ -0.4
DEPDC4-203ENST00000416321 EPHA10Q5JZY3 1008 aa12.56□□□□□ -0.4
DEPDC4-203ENST00000416321 SUSD4Q5VX71 490 aa12.56□□□□□ -0.4
DEPDC4-203ENST00000416321 FLAD1Q8NFF5 587 aa12.56□□□□□ -0.4
DEPDC4-203ENST00000416321 KIF1BPQ96EK5 621 aa12.56□□□□□ -0.4
DEPDC4-203ENST00000416321 PLA2G12BQ9BX93 195 aa12.56□□□□□ -0.4
DEPDC4-203ENST00000416321 NYXQ9GZU5 481 aa12.56□□□□□ -0.4
DEPDC4-203ENST00000416321 SRP68Q9UHB9 627 aaKnown RBP12.56□□□□□ -0.4
DEPDC4-203ENST00000416321 UBR3Q6ZT12 1888 aa12.56□□□□□ -0.4
DEPDC4-203ENST00000416321 PDE8AO60658 829 aa12.55□□□□□ -0.4
DEPDC4-203ENST00000416321 FOXO4P98177 505 aa12.55□□□□□ -0.4
DEPDC4-203ENST00000416321 CCDC57Q2TAC2 916 aa12.55□□□□□ -0.4
DEPDC4-203ENST00000416321 SMIM5Q71RC9 77 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms