RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 LRFN2Q9ULH4 789 aa7.2□□□□□ -1.26
HMGB3P23-201ENST00000414981 SHISA8B8ZZ34 492 aa7.19□□□□□ -1.26
HMGB3P23-201ENST00000414981 SUPT5HO00267 1087 aaKnown RBP7.19□□□□□ -1.26
HMGB3P23-201ENST00000414981 SIN3BO75182 1162 aa7.19□□□□□ -1.26
HMGB3P23-201ENST00000414981 INPP5BP32019 993 aa7.19□□□□□ -1.26
HMGB3P23-201ENST00000414981 SPEM2Q0P670 501 aa7.19□□□□□ -1.26
HMGB3P23-201ENST00000414981 NEUROD1Q13562 356 aa7.19□□□□□ -1.26
HMGB3P23-201ENST00000414981 IFT43Q96FT9 208 aa7.19□□□□□ -1.26
HMGB3P23-201ENST00000414981 SLC30A3Q99726 388 aa7.19□□□□□ -1.26
HMGB3P23-201ENST00000414981 SLAIN2Q9P270 581 aa7.19□□□□□ -1.26
HMGB3P23-201ENST00000414981 TMEM88BA6NKF7 163 aa7.18□□□□□ -1.26
HMGB3P23-201ENST00000414981 RNF225M0QZC1 329 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P23-201ENST00000414981 MICAL2O94851 1124 aa7.18□□□□□ -1.26
HMGB3P23-201ENST00000414981 PCBP4P57723 403 aaKnown RBP7.18□□□□□ -1.26
HMGB3P23-201ENST00000414981 C16orf46Q6P387 395 aa7.18□□□□□ -1.26
HMGB3P23-201ENST00000414981 SYT9Q86SS6 491 aa7.18□□□□□ -1.26
HMGB3P23-201ENST00000414981 ADARB2-AS1A8MUL3 147 aa7.17□□□□□ -1.26
HMGB3P23-201ENST00000414981 EPB42P16452 691 aa7.17□□□□□ -1.26
HMGB3P23-201ENST00000414981 ATP2B4P23634 1241 aa7.17□□□□□ -1.26
HMGB3P23-201ENST00000414981 BRD2P25440 801 aaKnown RBP7.17□□□□□ -1.26
HMGB3P23-201ENST00000414981 GRIN2CQ14957 1233 aa7.17□□□□□ -1.26
HMGB3P23-201ENST00000414981 FCHSD1Q86WN1 690 aa7.17□□□□□ -1.26
HMGB3P23-201ENST00000414981 GSX2Q9BZM3 304 aa7.17□□□□□ -1.26
HMGB3P23-201ENST00000414981 PHF20L1A8MW92 1017 aa7.16□□□□□ -1.26
HMGB3P23-201ENST00000414981 OPLAHO14841 1288 aa7.16□□□□□ -1.26
HMGB3P23-201ENST00000414981 ALAS2P22557 587 aa7.16□□□□□ -1.26
HMGB3P23-201ENST00000414981 GSK3AP49840 483 aa7.16□□□□□ -1.26
HMGB3P23-201ENST00000414981 IDH3AP50213 366 aa7.16□□□□□ -1.26
HMGB3P23-201ENST00000414981 ARSDP51689 593 aa7.16□□□□□ -1.26
HMGB3P23-201ENST00000414981 KANK3Q6NY19 840 aa7.16□□□□□ -1.26
HMGB3P23-201ENST00000414981 TNFRSF25Q93038 417 aa7.16□□□□□ -1.26
HMGB3P23-201ENST00000414981 MDFIQ99750 246 aa7.16□□□□□ -1.26
HMGB3P23-201ENST00000414981 ELOA3CA0A087WX78 387 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P23-201ENST00000414981 ELOA3DA6NLF2 546 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P23-201ENST00000414981 SSFA2P28290 1259 aa7.15□□□□□ -1.26
HMGB3P23-201ENST00000414981 CCINQ13939 588 aa7.15□□□□□ -1.26
HMGB3P23-201ENST00000414981 ELOA3BQ3SY89 546 aa7.15□□□□□ -1.26
HMGB3P23-201ENST00000414981 CAPN12Q6ZSI9 719 aa7.15□□□□□ -1.26
HMGB3P23-201ENST00000414981 PODNQ7Z5L7 613 aa7.15□□□□□ -1.26
HMGB3P23-201ENST00000414981 ELOA3Q8NG57 546 aa7.15□□□□□ -1.26
HMGB3P23-201ENST00000414981 SAP130Q9H0E3 1048 aa7.15□□□□□ -1.26
HMGB3P23-201ENST00000414981 CNTNAP5Q8WYK1 1306 aa7.15□□□□□ -1.26
HMGB3P23-201ENST00000414981 HOXB4P17483 251 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P23-201ENST00000414981 RASSF7Q02833 373 aa7.14□□□□□ -1.27
HMGB3P23-201ENST00000414981 NAA30Q147X3 362 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P23-201ENST00000414981 LINC00114Q6XXX2 140 aa7.14□□□□□ -1.27
HMGB3P23-201ENST00000414981 TREML1Q86YW5 311 aa7.14□□□□□ -1.27
HMGB3P23-201ENST00000414981 MKL2Q9ULH7 1088 aa7.14□□□□□ -1.27
HMGB3P23-201ENST00000414981 PIK3R2O00459 728 aa7.13□□□□□ -1.27
HMGB3P23-201ENST00000414981 EGFRP00533 1210 aa7.13□□□□□ -1.27
HMGB3P23-201ENST00000414981 AMPD1P23109 780 aa7.13□□□□□ -1.27
HMGB3P23-201ENST00000414981 GRNP28799 593 aaKnown RBP7.13□□□□□ -1.27
HMGB3P23-201ENST00000414981 SNRPNP63162 240 aaKnown RBP7.13□□□□□ -1.27
HMGB3P23-201ENST00000414981 CHSY3Q70JA7 882 aa7.13□□□□□ -1.27
HMGB3P23-201ENST00000414981 BHMTQ93088 406 aa7.13□□□□□ -1.27
HMGB3P23-201ENST00000414981 MKNK1Q9BUB5 465 aa7.13□□□□□ -1.27
HMGB3P23-201ENST00000414981 STIM2Q9P246 746 aa7.13□□□□□ -1.27
HMGB3P23-201ENST00000414981 USTQ9Y2C2 406 aa7.13□□□□□ -1.27
HMGB3P23-201ENST00000414981 TNFRSF10BO14763 440 aa7.12□□□□□ -1.27
HMGB3P23-201ENST00000414981 IRS1P35568 1242 aa7.12□□□□□ -1.27
HMGB3P23-201ENST00000414981 PNMA5Q96PV4 448 aa7.12□□□□□ -1.27
HMGB3P23-201ENST00000414981 RRAGCQ9HB90 399 aa7.12□□□□□ -1.27
HMGB3P23-201ENST00000414981 FAM13BQ9NYF5 915 aa7.12□□□□□ -1.27
HMGB3P23-201ENST00000414981 RTCBQ9Y3I0 505 aaKnown RBP7.12□□□□□ -1.27
HMGB3P23-201ENST00000414981 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P23-201ENST00000414981 MAP3K6O95382 1288 aa7.11□□□□□ -1.27
HMGB3P23-201ENST00000414981 PDE4CQ08493 712 aa7.11□□□□□ -1.27
HMGB3P23-201ENST00000414981 ETFBKMTQ8IXQ9 262 aa7.11□□□□□ -1.27
HMGB3P23-201ENST00000414981 TMEM151AQ8N4L1 468 aa7.11□□□□□ -1.27
HMGB3P23-201ENST00000414981 ARID3AQ99856 593 aa7.11□□□□□ -1.27
HMGB3P23-201ENST00000414981 GDF11O95390 407 aa7.1□□□□□ -1.27
HMGB3P23-201ENST00000414981 DGKGP49619 791 aa7.1□□□□□ -1.27
HMGB3P23-201ENST00000414981 PCSK7Q16549 785 aa7.1□□□□□ -1.27
HMGB3P23-201ENST00000414981 RAB44Q7Z6P3 723 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P23-201ENST00000414981 ALYREFQ86V81 257 aaKnown RBP7.1□□□□□ -1.27
HMGB3P23-201ENST00000414981 ABTB2Q8N961 1025 aa7.1□□□□□ -1.27
HMGB3P23-201ENST00000414981 SEPT3Q9UH03 358 aa7.1□□□□□ -1.27
HMGB3P23-201ENST00000414981 ADH7P40394 386 aa7.09□□□□□ -1.27
HMGB3P23-201ENST00000414981 PHLDB3Q6NSJ2 640 aa7.09□□□□□ -1.27
HMGB3P23-201ENST00000414981 CMTR1Q8N1G2 835 aaKnown RBP7.09□□□□□ -1.27
HMGB3P23-201ENST00000414981 PIK3R5Q8WYR1 880 aa7.09□□□□□ -1.27
HMGB3P23-201ENST00000414981 PRDM6Q9NQX0 595 aa7.09□□□□□ -1.27
HMGB3P23-201ENST00000414981 GNB5O14775 395 aa7.08□□□□□ -1.28
HMGB3P23-201ENST00000414981 NFKB1P19838 968 aa7.08□□□□□ -1.28
HMGB3P23-201ENST00000414981 TARSP26639 723 aaKnown RBP7.08□□□□□ -1.28
HMGB3P23-201ENST00000414981 FAM26DQ5JW98 314 aa7.08□□□□□ -1.28
HMGB3P23-201ENST00000414981 RGL4Q8IZJ4 473 aa7.08□□□□□ -1.28
HMGB3P23-201ENST00000414981 HELQQ8TDG4 1101 aa7.08□□□□□ -1.28
HMGB3P23-201ENST00000414981 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
HMGB3P23-201ENST00000414981 STARD13Q9Y3M8 1113 aa7.08□□□□□ -1.28
HMGB3P23-201ENST00000414981 KCNMB2Q9Y691 235 aa7.08□□□□□ -1.28
HMGB3P23-201ENST00000414981 ZBTB39O15060 712 aa7.07□□□□□ -1.28
HMGB3P23-201ENST00000414981 XYLBO75191 536 aa7.07□□□□□ -1.28
HMGB3P23-201ENST00000414981 SASH3O75995 380 aa7.07□□□□□ -1.28
HMGB3P23-201ENST00000414981 ZAP70P43403 619 aa7.07□□□□□ -1.28
HMGB3P23-201ENST00000414981 B4GALNT3Q6L9W6 998 aa7.07□□□□□ -1.28
HMGB3P23-201ENST00000414981 C20orf204Q6ZNR8 217 aa7.07□□□□□ -1.28
HMGB3P23-201ENST00000414981 MICALL1Q8N3F8 863 aa7.07□□□□□ -1.28
HMGB3P23-201ENST00000414981 GTF3C2Q8WUA4 911 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P23-201ENST00000414981 UBE2OQ9C0C9 1292 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms