RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 NFKBIEO00221 500 aa20.28■□□□□ 0.84
MCF2L-211ENST00000413354 TCIRG1Q13488 830 aa20.28■□□□□ 0.84
MCF2L-211ENST00000413354 CRY2Q49AN0 593 aa20.28■□□□□ 0.84
MCF2L-211ENST00000413354 ZNF219Q9P2Y4 722 aaPredicted RBP20.28■□□□□ 0.84
MCF2L-211ENST00000413354 CACNA1FO60840 1977 aa20.27■□□□□ 0.84
MCF2L-211ENST00000413354 CCDC93Q567U6 631 aa20.27■□□□□ 0.84
MCF2L-211ENST00000413354 CCDC30Q5VVM6 783 aa20.27■□□□□ 0.84
MCF2L-211ENST00000413354 ANKRD13DQ6ZTN6 518 aa20.27■□□□□ 0.84
MCF2L-211ENST00000413354 RPGRQ92834 1020 aaKnown RBP20.27■□□□□ 0.84
MCF2L-211ENST00000413354 TAOK3Q9H2K8 898 aa20.27■□□□□ 0.84
MCF2L-211ENST00000413354 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.83
MCF2L-211ENST00000413354 ELL2O00472 640 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-211ENST00000413354 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
MCF2L-211ENST00000413354 NLRP10Q86W26 655 aa20.26■□□□□ 0.83
MCF2L-211ENST00000413354 FAM9BQ8IZU0 186 aa20.26■□□□□ 0.83
MCF2L-211ENST00000413354 C8orf58Q8NAV2 365 aa20.26■□□□□ 0.83
MCF2L-211ENST00000413354 LAMB2P55268 1798 aa20.26■□□□□ 0.83
MCF2L-211ENST00000413354 WDR63Q8IWG1 891 aa20.25■□□□□ 0.83
MCF2L-211ENST00000413354 TSR2Q969E8 191 aaKnown RBP20.25■□□□□ 0.83
MCF2L-211ENST00000413354 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
MCF2L-211ENST00000413354 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
MCF2L-211ENST00000413354 HOXA10P31260 410 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-211ENST00000413354 SLC10A5Q5PT55 438 aa20.23■□□□□ 0.83
MCF2L-211ENST00000413354 C7orf43Q8WVR3 580 aa20.23■□□□□ 0.83
MCF2L-211ENST00000413354 RBM17Q96I25 401 aaKnown RBP20.23■□□□□ 0.83
MCF2L-211ENST00000413354 TRMT112Q9UI30 125 aaKnown RBP20.23■□□□□ 0.83
MCF2L-211ENST00000413354 SH3TC1Q8TE82 1336 aa20.23■□□□□ 0.83
MCF2L-211ENST00000413354 RIC3Q7Z5B4 369 aa20.22■□□□□ 0.83
MCF2L-211ENST00000413354 RTKN2Q8IZC4 609 aa20.22■□□□□ 0.83
MCF2L-211ENST00000413354 STK31Q9BXU1 1019 aa20.22■□□□□ 0.83
MCF2L-211ENST00000413354 DDX60Q8IY21 1712 aaKnown RBP20.22■□□□□ 0.83
MCF2L-211ENST00000413354 KIF3CO14782 793 aa20.21■□□□□ 0.83
MCF2L-211ENST00000413354 DDX58O95786 925 aaKnown RBP20.21■□□□□ 0.83
MCF2L-211ENST00000413354 PRELPP51888 382 aa20.21■□□□□ 0.83
MCF2L-211ENST00000413354 TWISTNBQ3B726 338 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-211ENST00000413354 CC2D2BQ6DHV5 1058 aa20.21■□□□□ 0.83
MCF2L-211ENST00000413354 TSPYL6Q8N831 410 aa20.21■□□□□ 0.83
MCF2L-211ENST00000413354 CRAMP1Q96RY5 1269 aa20.21■□□□□ 0.83
MCF2L-211ENST00000413354 ISCA1Q9BUE6 129 aa20.21■□□□□ 0.83
MCF2L-211ENST00000413354 SALL2Q9Y467 1007 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-211ENST00000413354 FANCIQ9NVI1 1328 aa20.21■□□□□ 0.83
MCF2L-211ENST00000413354 FKBP4Q02790 459 aaKnown RBP eCLIP20.2■□□□□ 0.822e-6■□□□□ 10.6
MCF2L-211ENST00000413354 GRIPAP1Q4V328 841 aa20.2■□□□□ 0.82
MCF2L-211ENST00000413354 PHAXQ9H814 394 aaKnown RBP20.2■□□□□ 0.82
MCF2L-211ENST00000413354 TRIM28Q13263 835 aaKnown RBP20.19■□□□□ 0.82
MCF2L-211ENST00000413354 NMRK2Q9NPI5 230 aa20.19■□□□□ 0.82
MCF2L-211ENST00000413354 GLTPD2A6NH11 291 aa20.18■□□□□ 0.82
MCF2L-211ENST00000413354 ATP5J2-PTCD1G3V325 749 aa20.17■□□□□ 0.82
MCF2L-211ENST00000413354 PPEF1O14829 653 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-211ENST00000413354 DPY19L2Q6NUT2 758 aa20.17■□□□□ 0.82
MCF2L-211ENST00000413354 C3orf67Q6ZVT6 689 aa20.17■□□□□ 0.82
MCF2L-211ENST00000413354 C16orf71Q8IYS4 520 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-211ENST00000413354 TMX4Q9H1E5 349 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-211ENST00000413354 MYH16Q9H6N6 1097 aa20.17■□□□□ 0.82
MCF2L-211ENST00000413354 HCLS1P14317 486 aaPredicted RBP20.16■□□□□ 0.82
MCF2L-211ENST00000413354 HSP90B1P14625 803 aaKnown RBP20.16■□□□□ 0.82
MCF2L-211ENST00000413354 PSMD1Q99460 953 aa20.16■□□□□ 0.82
MCF2L-211ENST00000413354 WDR90Q96KV7 1748 aa20.16■□□□□ 0.82
MCF2L-211ENST00000413354 TOMM70O94826 608 aa20.15■□□□□ 0.82
MCF2L-211ENST00000413354 DDX46Q7L014 1031 aaKnown RBP20.15■□□□□ 0.82
MCF2L-211ENST00000413354 ABCC4O15439 1325 aa20.15■□□□□ 0.82
MCF2L-211ENST00000413354 SNED1Q8TER0 1413 aa20.15■□□□□ 0.82
MCF2L-211ENST00000413354 OLFM4Q6UX06 510 aa20.14■□□□□ 0.81
MCF2L-211ENST00000413354 CCDC191Q8NCU4 936 aa20.14■□□□□ 0.81
MCF2L-211ENST00000413354 MYD88Q99836 296 aa20.14■□□□□ 0.81
MCF2L-211ENST00000413354 METTL22Q9BUU2 404 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-211ENST00000413354 KSR2Q6VAB6 950 aa20.13■□□□□ 0.81
MCF2L-211ENST00000413354 SYNE4Q8N205 404 aa20.13■□□□□ 0.81
MCF2L-211ENST00000413354 FAM89AQ96GI7 184 aa20.13■□□□□ 0.81
MCF2L-211ENST00000413354 RRAGCQ9HB90 399 aa20.13■□□□□ 0.81
MCF2L-211ENST00000413354 ZNF277Q9NRM2 450 aaPredicted RBP20.13■□□□□ 0.81
MCF2L-211ENST00000413354 TAF1P21675 1872 aa20.12■□□□□ 0.81
MCF2L-211ENST00000413354 CCER2I3L3R5 266 aa20.12■□□□□ 0.81
MCF2L-211ENST00000413354 BBOX1O75936 387 aa20.12■□□□□ 0.81
MCF2L-211ENST00000413354 IARSP41252 1262 aaKnown RBP20.12■□□□□ 0.81
MCF2L-211ENST00000413354 NEXNQ0ZGT2 675 aa20.12■□□□□ 0.81
MCF2L-211ENST00000413354 GRAPQ13588 217 aa20.12■□□□□ 0.81
MCF2L-211ENST00000413354 TMC4Q7Z404 712 aa20.12■□□□□ 0.81
MCF2L-211ENST00000413354 ZBTB38Q8NAP3 1195 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-211ENST00000413354 RBM46Q8TBY0 533 aaKnown RBP20.12■□□□□ 0.81
MCF2L-211ENST00000413354 GRAPLQ8TC17 118 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-211ENST00000413354 CWC25Q9NXE8 425 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-211ENST00000413354 MAP3K2Q9Y2U5 619 aa20.12■□□□□ 0.81
MCF2L-211ENST00000413354 MYH3P11055 1940 aa20.12■□□□□ 0.81
MCF2L-211ENST00000413354 IRS4O14654 1257 aaPredicted RBP20.11■□□□□ 0.81
MCF2L-211ENST00000413354 SLC4A2P04920 1241 aa20.11■□□□□ 0.81
MCF2L-211ENST00000413354 VEGFAP15692 232 aaPredicted RBP20.11■□□□□ 0.81
MCF2L-211ENST00000413354 EXOSC9Q06265 439 aaKnown RBP20.11■□□□□ 0.81
MCF2L-211ENST00000413354 ATP6V0A2Q9Y487 856 aa20.11■□□□□ 0.81
MCF2L-211ENST00000413354 LRRC37AA6NMS7 1700 aa20.1■□□□□ 0.81
MCF2L-211ENST00000413354 PI4KAP2A4QPH2 592 aa20.1■□□□□ 0.81
MCF2L-211ENST00000413354 TCERG1O14776 1098 aaKnown RBP20.1■□□□□ 0.81
MCF2L-211ENST00000413354 VAMP4O75379 141 aa20.1■□□□□ 0.81
MCF2L-211ENST00000413354 PCCAP05165 728 aaPredicted RBP20.1■□□□□ 0.81
MCF2L-211ENST00000413354 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
MCF2L-211ENST00000413354 PI4KAP1Q8N8J0 262 aa20.1■□□□□ 0.81
MCF2L-211ENST00000413354 SCN4AP35499 1836 aa20.1■□□□□ 0.81
MCF2L-211ENST00000413354 ZNF521Q96K83 1311 aa20.09■□□□□ 0.81
MCF2L-211ENST00000413354 FLIIQ13045 1269 aa20.09■□□□□ 0.81
MCF2L-211ENST00000413354 JDP2Q8WYK2 163 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms