RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 PPP1R42Q7Z4L9 355 aa17.81■□□□□ 0.44
CPNE1-206ENST00000412056 WWC3Q9ULE0 1092 aa17.81■□□□□ 0.44
CPNE1-206ENST00000412056 ARFGEF1Q9Y6D6 1849 aa17.8■□□□□ 0.44
CPNE1-206ENST00000412056 F6X3S4 739 aa17.8■□□□□ 0.44
CPNE1-206ENST00000412056 CHRNA5P30532 468 aa17.8■□□□□ 0.44
CPNE1-206ENST00000412056 RARSP54136 660 aaKnown RBP17.8■□□□□ 0.44
CPNE1-206ENST00000412056 ERFEQ4G0M1 354 aa17.8■□□□□ 0.44
CPNE1-206ENST00000412056 DNAAF4Q8WXU2 420 aa17.8■□□□□ 0.44
CPNE1-206ENST00000412056 UTP14AQ9BVJ6 771 aaKnown RBP17.8■□□□□ 0.44
CPNE1-206ENST00000412056 MYH3P11055 1940 aa17.79■□□□□ 0.44
CPNE1-206ENST00000412056 GTF2E1P29083 439 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-206ENST00000412056 BRIP1Q9BX63 1249 aa17.79■□□□□ 0.44
CPNE1-206ENST00000412056 RIC1Q4ADV7 1423 aa17.79■□□□□ 0.44
CPNE1-206ENST00000412056 IGKV5-2P06315 115 aa17.78■□□□□ 0.44
CPNE1-206ENST00000412056 TRIM28Q13263 835 aaKnown RBP17.78■□□□□ 0.44
CPNE1-206ENST00000412056 SYNE4Q8N205 404 aa17.78■□□□□ 0.44
CPNE1-206ENST00000412056 TRMT112Q9UI30 125 aaKnown RBP17.78■□□□□ 0.44
CPNE1-206ENST00000412056 KCNA3P22001 575 aa17.77■□□□□ 0.44
CPNE1-206ENST00000412056 PDE6BP35913 854 aa17.77■□□□□ 0.44
CPNE1-206ENST00000412056 NEXNQ0ZGT2 675 aa17.77■□□□□ 0.44
CPNE1-206ENST00000412056 CWF19L2Q2TBE0 894 aaKnown RBP17.77■□□□□ 0.44
CPNE1-206ENST00000412056 C2CD5Q86YS7 1000 aa17.77■□□□□ 0.44
CPNE1-206ENST00000412056 PTPRCP08575 1304 aa17.76■□□□□ 0.43
CPNE1-206ENST00000412056 RNF123Q5XPI4 1314 aa17.76■□□□□ 0.43
CPNE1-206ENST00000412056 SH3TC1Q8TE82 1336 aa17.76■□□□□ 0.43
CPNE1-206ENST00000412056 TAF1P21675 1872 aa17.76■□□□□ 0.43
CPNE1-206ENST00000412056 NEURL1BA8MQ27 555 aa17.76■□□□□ 0.43
CPNE1-206ENST00000412056 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
CPNE1-206ENST00000412056 CCDC191Q8NCU4 936 aa17.76■□□□□ 0.43
CPNE1-206ENST00000412056 CWC25Q9NXE8 425 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-206ENST00000412056 SLX4Q8IY92 1834 aa17.76■□□□□ 0.43
CPNE1-206ENST00000412056 BRPF1P55201 1214 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-206ENST00000412056 RTL5Q5HYW3 569 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-206ENST00000412056 FAM89AQ96GI7 184 aa17.75■□□□□ 0.43
CPNE1-206ENST00000412056 H0YIN7 160 aa17.74■□□□□ 0.43
CPNE1-206ENST00000412056 BCAR3O75815 825 aa17.74■□□□□ 0.43
CPNE1-206ENST00000412056 HCLS1P14317 486 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-206ENST00000412056 YBX3P16989 372 aaKnown RBP eCLIP17.74■□□□□ 0.432e-6■■■■□ 21.8
CPNE1-206ENST00000412056 BEND3Q5T5X7 828 aa17.74■□□□□ 0.43
CPNE1-206ENST00000412056 SLC4A10Q6U841 1118 aa17.74■□□□□ 0.43
CPNE1-206ENST00000412056 C3orf67Q6ZVT6 689 aa17.74■□□□□ 0.43
CPNE1-206ENST00000412056 LINS1Q8NG48 757 aa17.74■□□□□ 0.43
CPNE1-206ENST00000412056 JARID2Q92833 1246 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-206ENST00000412056 NOB1Q9ULX3 412 aaKnown RBP17.74■□□□□ 0.43
CPNE1-206ENST00000412056 KIF16BQ96L93 1317 aa17.73■□□□□ 0.43
CPNE1-206ENST00000412056 KLRG2A4D1S0 409 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-206ENST00000412056 PCCAP05165 728 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-206ENST00000412056 SRGNP10124 158 aa17.73■□□□□ 0.43
CPNE1-206ENST00000412056 SLC10A5Q5PT55 438 aa17.73■□□□□ 0.43
CPNE1-206ENST00000412056 ZBTB38Q8NAP3 1195 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-206ENST00000412056 GPR162Q16538 588 aa17.72■□□□□ 0.43
CPNE1-206ENST00000412056 ZNF622Q969S3 477 aaKnown RBP eCLIP17.72■□□□□ 0.434e-6■■□□□ 12.1
CPNE1-206ENST00000412056 PIM2Q9P1W9 311 aa17.72■□□□□ 0.43
CPNE1-206ENST00000412056 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
CPNE1-206ENST00000412056 BCS1LQ9Y276 419 aa17.72■□□□□ 0.43
CPNE1-206ENST00000412056 CHD4Q14839 1912 aa17.71■□□□□ 0.43
CPNE1-206ENST00000412056 GCKRQ14397 625 aa17.71■□□□□ 0.43
CPNE1-206ENST00000412056 CRY2Q49AN0 593 aa17.71■□□□□ 0.43
CPNE1-206ENST00000412056 SRCAPQ6ZRS2 3230 aa17.7■□□□□ 0.42
CPNE1-206ENST00000412056 IRS4O14654 1257 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-206ENST00000412056 NPR1P16066 1061 aa17.7■□□□□ 0.42
CPNE1-206ENST00000412056 STYK1Q6J9G0 422 aa17.7■□□□□ 0.42
CPNE1-206ENST00000412056 UBE3BQ7Z3V4 1068 aa17.7■□□□□ 0.42
CPNE1-206ENST00000412056 MASTLQ96GX5 879 aa17.7■□□□□ 0.42
CPNE1-206ENST00000412056 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
CPNE1-206ENST00000412056 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
CPNE1-206ENST00000412056 SPEF2Q9C093 1822 aa17.7■□□□□ 0.42
CPNE1-206ENST00000412056 CDHR2Q9BYE9 1310 aa17.7■□□□□ 0.42
CPNE1-206ENST00000412056 H7C1W4 665 aa17.69■□□□□ 0.42
CPNE1-206ENST00000412056 ALDH1L1O75891 902 aa17.69■□□□□ 0.42
CPNE1-206ENST00000412056 DALRD3Q5D0E6 543 aaKnown RBP17.69■□□□□ 0.42
CPNE1-206ENST00000412056 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
CPNE1-206ENST00000412056 FRAT1Q92837 279 aaPredicted RBP17.69■□□□□ 0.42
CPNE1-206ENST00000412056 API5Q9BZZ5 524 aaKnown RBP17.69■□□□□ 0.42
CPNE1-206ENST00000412056 TNNQ9UQP3 1299 aa17.69■□□□□ 0.42
CPNE1-206ENST00000412056 COL4A1P02462 1669 aa17.68■□□□□ 0.42
CPNE1-206ENST00000412056 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
CPNE1-206ENST00000412056 CASP7P55210 303 aa17.68■□□□□ 0.42
CPNE1-206ENST00000412056 FER1L6Q2WGJ9 1857 aa17.68■□□□□ 0.42
CPNE1-206ENST00000412056 CCDC88AQ3V6T2 1871 aa17.68■□□□□ 0.42
CPNE1-206ENST00000412056 RPGRQ92834 1020 aaKnown RBP17.68■□□□□ 0.42
CPNE1-206ENST00000412056 CNKSR1Q969H4 720 aa17.68■□□□□ 0.42
CPNE1-206ENST00000412056 ARHGAP45Q92619 1136 aa17.67■□□□□ 0.42
CPNE1-206ENST00000412056 ABCC4O15439 1325 aa17.67■□□□□ 0.42
CPNE1-206ENST00000412056 SBF1O95248 1867 aa17.67■□□□□ 0.42
CPNE1-206ENST00000412056 PDE8AO60658 829 aa17.66■□□□□ 0.42
CPNE1-206ENST00000412056 TRIM27P14373 513 aa17.66■□□□□ 0.42
CPNE1-206ENST00000412056 PRPF40BQ6NWY9 871 aaKnown RBP17.66■□□□□ 0.42
CPNE1-206ENST00000412056 RCAN3Q9UKA8 241 aa17.66■□□□□ 0.42
CPNE1-206ENST00000412056 GRM8O00222 908 aa17.65■□□□□ 0.42
CPNE1-206ENST00000412056 IPO8O15397 1037 aaKnown RBP17.65■□□□□ 0.42
CPNE1-206ENST00000412056 HOXA10P31260 410 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-206ENST00000412056 SF3B3Q15393 1217 aaKnown RBP17.65■□□□□ 0.42
CPNE1-206ENST00000412056 ZKSCAN2Q63HK3 967 aa17.65■□□□□ 0.42
CPNE1-206ENST00000412056 ATF7IPQ6VMQ6 1270 aa17.65■□□□□ 0.42
CPNE1-206ENST00000412056 RBM17Q96I25 401 aaKnown RBP17.65■□□□□ 0.42
CPNE1-206ENST00000412056 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-206ENST00000412056 HSP90B1P14625 803 aaKnown RBP17.64■□□□□ 0.41
CPNE1-206ENST00000412056 CLUAP1Q96AJ1 413 aa17.64■□□□□ 0.41
CPNE1-206ENST00000412056 CRAMP1Q96RY5 1269 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms