RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 MDFIQ99750 246 aa4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 BCS1LQ9Y276 419 aa4.34□□□□□ -1.71
RNU2-54P-201ENST00000410299 SIN3BO75182 1162 aa4.33□□□□□ -1.72
RNU2-54P-201ENST00000410299 WEE1P30291 646 aa4.33□□□□□ -1.72
RNU2-54P-201ENST00000410299 KCNQ4P56696 695 aa4.33□□□□□ -1.72
RNU2-54P-201ENST00000410299 RTN1Q16799 776 aa4.33□□□□□ -1.72
RNU2-54P-201ENST00000410299 KLK14Q9P0G3 267 aa4.33□□□□□ -1.72
RNU2-54P-201ENST00000410299 NOVA2Q9UNW9 492 aaKnown RBP4.33□□□□□ -1.72
RNU2-54P-201ENST00000410299 KCNH4Q9UQ05 1017 aa4.33□□□□□ -1.72
RNU2-54P-201ENST00000410299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.32□□□□□ -1.72
RNU2-54P-201ENST00000410299 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.32□□□□□ -1.72
RNU2-54P-201ENST00000410299 ALAS2P22557 587 aa4.32□□□□□ -1.72
RNU2-54P-201ENST00000410299 BHMTQ93088 406 aa4.32□□□□□ -1.72
RNU2-54P-201ENST00000410299 TRIM11Q96F44 468 aa4.32□□□□□ -1.72
RNU2-54P-201ENST00000410299 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
RNU2-54P-201ENST00000410299 ZMYND15Q9H091 742 aa4.32□□□□□ -1.72
RNU2-54P-201ENST00000410299 DMGDHQ9UI17 866 aaKnown RBP4.32□□□□□ -1.72
RNU2-54P-201ENST00000410299 ADARB2-AS1A8MUL3 147 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 TGFBR3LH3BV60 316 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 M0R082 166 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 PROCP04070 461 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 GRNP28799 593 aaKnown RBP4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 ADH7P40394 386 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 TBC1D8BQ0IIM8 1120 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 NEUROD1Q13562 356 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 DGKZQ13574 1117 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 HIF1AQ16665 826 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 ZNF417Q8TAU3 575 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 STK32AQ8WU08 396 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 TNFRSF25Q93038 417 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 VTI1AQ96AJ9 217 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 PRIMPOLQ96LW4 560 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 ZNF587Q96SQ5 575 aaPredicted RBP4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 PLVAPQ9BX97 442 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 IGFLR1Q9H665 355 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 QTRT2Q9H974 415 aaKnown RBP4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 ZMIZ1Q9ULJ6 1067 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 STARD13Q9Y3M8 1113 aa4.31□□□□□ -1.72
RNU2-54P-201ENST00000410299 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 PIK3R2O00459 728 aa4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 FOXO3O43524 673 aa4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 PRMT3O60678 531 aa4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 ALBP02768 609 aa4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 SRPK2P78362 688 aaKnown RBP4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 FKBP5Q13451 457 aaPredicted RBP4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 IER5Q5VY09 327 aa4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 C8orf86Q6ZUL3 223 aa4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 KRTAP1-3Q8IUG1 177 aa4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 GSX2Q9BZM3 304 aa4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 NOP53Q9NZM5 478 aaKnown RBP4.3□□□□□ -1.72
RNU2-54P-201ENST00000410299 ACIN1Q9UKV3 1341 aaKnown RBP4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 ARID3CA6NKF2 412 aa4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 C1QTNF9BB2RNN3 333 aa4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 INPP5BP32019 993 aa4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 IDH3AP50213 366 aa4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 FAM69CQ0P6D2 419 aa4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 COL9A3Q14050 684 aaPredicted RBP4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 ALYREFQ86V81 257 aaKnown RBP4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 CD163Q86VB7 1156 aa4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 MICALL1Q8N3F8 863 aa4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 UBE2OQ9C0C9 1292 aaKnown RBP4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 LRFN2Q9ULH4 789 aa4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 GTF3C3Q9Y5Q9 886 aa4.29□□□□□ -1.72
RNU2-54P-201ENST00000410299 MICAL2O94851 1124 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 NFKB1P19838 968 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 CHRNA4P43681 627 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 CCINQ13939 588 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 ELOAQ14241 798 aaKnown RBP4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 OCLNQ16625 522 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 SWI5Q1ZZU3 235 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 C11orf91Q3C1V1 193 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 COX20Q5RI15 118 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 CAPN12Q6ZSI9 719 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 KRT25Q7Z3Z0 450 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 IFT43Q96FT9 208 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 MYO19Q96H55 970 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 PNMA5Q96PV4 448 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 DNAJB12Q9NXW2 375 aaKnown RBP4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 SLC6A14Q9UN76 642 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 USP20Q9Y2K6 914 aa4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.28□□□□□ -1.72
RNU2-54P-201ENST00000410299 FAM229AH3BQW9 127 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 OPLAHO14841 1288 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 ATG7O95352 703 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 EPB42P16452 691 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 TARSP26639 723 aaKnown RBP4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 ARSDP51689 593 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 TMEM164Q5U3C3 297 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 C20orf204Q6ZNR8 217 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 NUDT8Q8WV74 236 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 CCDC97Q96F63 343 aaPredicted RBP4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 MKNK1Q9BUB5 465 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 SAP130Q9H0E3 1048 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 PRDM6Q9NQX0 595 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 ZFATQ9P243 1243 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 NAGPAQ9UK23 515 aa4.27□□□□□ -1.73
RNU2-54P-201ENST00000410299 SASH3O75995 380 aa4.26□□□□□ -1.73
RNU2-54P-201ENST00000410299 SPATA31C1P0DKV0 1188 aa4.26□□□□□ -1.73
RNU2-54P-201ENST00000410299 NID1P14543 1247 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms