RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 KCNJ4P48050 445 aa12.82□□□□□ -0.36
CLIP4-204ENST00000404424 ME3Q16798 604 aa12.82□□□□□ -0.36
CLIP4-204ENST00000404424 EAF2Q96CJ1 260 aaPredicted RBP12.82□□□□□ -0.36
CLIP4-204ENST00000404424 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
CLIP4-204ENST00000404424 SIPA1L3O60292 1781 aaPredicted RBP12.82□□□□□ -0.36
CLIP4-204ENST00000404424 PDCP20941 246 aa12.82□□□□□ -0.36
CLIP4-204ENST00000404424 NMIQ13287 307 aaPredicted RBP12.82□□□□□ -0.36
CLIP4-204ENST00000404424 LARP1Q6PKG0 1096 aaKnown RBP12.82□□□□□ -0.36
CLIP4-204ENST00000404424 FUCA2Q9BTY2 467 aa12.82□□□□□ -0.36
CLIP4-204ENST00000404424 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLIP4-204ENST00000404424 ADAMTS7Q9UKP4 1686 aa12.81□□□□□ -0.36
CLIP4-204ENST00000404424 DNM1Q05193 864 aaKnown RBP12.81□□□□□ -0.36
CLIP4-204ENST00000404424 SLC27A2O14975 620 aa12.81□□□□□ -0.36
CLIP4-204ENST00000404424 NEXNQ0ZGT2 675 aa12.81□□□□□ -0.36
CLIP4-204ENST00000404424 SASS6Q6UVJ0 657 aa12.81□□□□□ -0.36
CLIP4-204ENST00000404424 MAP7D2Q96T17 732 aa12.81□□□□□ -0.36
CLIP4-204ENST00000404424 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
CLIP4-204ENST00000404424 USP25Q9UHP3 1055 aa12.81□□□□□ -0.36
CLIP4-204ENST00000404424 KDM4AO75164 1064 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 ADCY5O95622 1261 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
CLIP4-204ENST00000404424 ST3GAL1Q11201 340 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 PDIA6Q15084 440 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 TSGA10IPQ3SY00 556 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 FAM227BQ96M60 508 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 TPCN1Q9ULQ1 816 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 PRAMEF22A3QJZ6 481 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 KRT85P78386 507 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 LARP1BQ659C4 914 aaKnown RBP12.8□□□□□ -0.36
CLIP4-204ENST00000404424 BLOC1S2Q6QNY1 142 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 RIC3Q7Z5B4 369 aa12.8□□□□□ -0.36
CLIP4-204ENST00000404424 CCDC8Q9H0W5 538 aaPredicted RBP12.8□□□□□ -0.36
CLIP4-204ENST00000404424 ELP1O95163 1332 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 MRC1P22897 1456 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 JCADQ9P266 1359 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 MED23Q9ULK4 1368 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 UQCRHLA0A096LP55 91 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 VPS37CA5D8V6 355 aaPredicted RBP12.79□□□□□ -0.36
CLIP4-204ENST00000404424 DYNC1I1O14576 645 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 IGKV5-2P06315 115 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 UQCRHP07919 91 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 PIBF1Q8WXW3 757 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 FSD1Q9BTV5 496 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 AIMP1Q12904 312 aaKnown RBP12.79□□□□□ -0.36
CLIP4-204ENST00000404424 ZNF790Q6PG37 636 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
CLIP4-204ENST00000404424 RPS6KB1P23443 525 aa12.78□□□□□ -0.36
CLIP4-204ENST00000404424 NPHP4O75161 1426 aaPredicted RBP12.78□□□□□ -0.36
CLIP4-204ENST00000404424 A0A0D9SFI3 127 aa12.78□□□□□ -0.36
CLIP4-204ENST00000404424 NEURL1BA8MQ27 555 aa12.78□□□□□ -0.36
CLIP4-204ENST00000404424 TPM3P06753 285 aa12.78□□□□□ -0.36
CLIP4-204ENST00000404424 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
CLIP4-204ENST00000404424 KRT32Q14532 448 aa12.78□□□□□ -0.36
CLIP4-204ENST00000404424 GIMAP6Q6P9H5 292 aa12.78□□□□□ -0.36
CLIP4-204ENST00000404424 MTERF4Q7Z6M4 381 aaKnown RBP12.78□□□□□ -0.36
CLIP4-204ENST00000404424 NECAB1Q8N987 351 aa12.78□□□□□ -0.36
CLIP4-204ENST00000404424 RBM33Q96EV2 1170 aaKnown RBP12.78□□□□□ -0.36
CLIP4-204ENST00000404424 METTL22Q9BUU2 404 aaPredicted RBP12.78□□□□□ -0.36
CLIP4-204ENST00000404424 GCKRQ14397 625 aa12.77□□□□□ -0.37
CLIP4-204ENST00000404424 COPRSQ9NQ92 184 aa12.77□□□□□ -0.37
CLIP4-204ENST00000404424 TLR7Q9NYK1 1049 aaKnown RBP12.77□□□□□ -0.37
CLIP4-204ENST00000404424 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.77□□□□□ -0.37
CLIP4-204ENST00000404424 RFX7Q2KHR2 1363 aa12.77□□□□□ -0.37
CLIP4-204ENST00000404424 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.37
CLIP4-204ENST00000404424 USPL1Q5W0Q7 1092 aa12.77□□□□□ -0.37
CLIP4-204ENST00000404424 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
CLIP4-204ENST00000404424 SCAND2PQ9GZW5 306 aaPredicted RBP12.77□□□□□ -0.37
CLIP4-204ENST00000404424 SLC52A2Q9HAB3 445 aa12.77□□□□□ -0.37
CLIP4-204ENST00000404424 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
CLIP4-204ENST00000404424 ATP5JP18859 108 aa12.76□□□□□ -0.37
CLIP4-204ENST00000404424 SIL1Q9H173 461 aa12.76□□□□□ -0.37
CLIP4-204ENST00000404424 ERBB3P21860 1342 aa12.76□□□□□ -0.37
CLIP4-204ENST00000404424 COL15A1P39059 1388 aa12.76□□□□□ -0.37
CLIP4-204ENST00000404424 MST1RQ04912 1400 aa12.76□□□□□ -0.37
CLIP4-204ENST00000404424 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.37
CLIP4-204ENST00000404424 TTC6Q86TZ1 520 aa12.76□□□□□ -0.37
CLIP4-204ENST00000404424 TAF5LO75529 589 aa12.75□□□□□ -0.37
CLIP4-204ENST00000404424 TOB2Q14106 344 aaPredicted RBP12.75□□□□□ -0.37
CLIP4-204ENST00000404424 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
CLIP4-204ENST00000404424 CDC37L1Q7L3B6 337 aa12.75□□□□□ -0.37
CLIP4-204ENST00000404424 DDX54Q8TDD1 881 aaKnown RBP12.75□□□□□ -0.37
CLIP4-204ENST00000404424 XAGE3Q8WTP9 111 aa12.75□□□□□ -0.37
CLIP4-204ENST00000404424 RAPGEF4Q8WZA2 1011 aa12.75□□□□□ -0.37
CLIP4-204ENST00000404424 PRIMPOLQ96LW4 560 aa12.75□□□□□ -0.37
CLIP4-204ENST00000404424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLIP4-204ENST00000404424 NPHP3Q7Z494 1330 aa12.75□□□□□ -0.37
CLIP4-204ENST00000404424 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
CLIP4-204ENST00000404424 MAP3K11Q16584 847 aa12.74□□□□□ -0.37
CLIP4-204ENST00000404424 TPRNQ4KMQ1 711 aa12.74□□□□□ -0.37
CLIP4-204ENST00000404424 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
CLIP4-204ENST00000404424 KRT28Q7Z3Y7 464 aa12.74□□□□□ -0.37
CLIP4-204ENST00000404424 MYD88Q99836 296 aa12.74□□□□□ -0.37
CLIP4-204ENST00000404424 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
CLIP4-204ENST00000404424 GOLGA6L6A8MZA4 724 aa12.74□□□□□ -0.37
CLIP4-204ENST00000404424 HMGN5P82970 282 aaKnown RBP12.74□□□□□ -0.37
CLIP4-204ENST00000404424 DNTTIP2Q5QJE6 756 aaKnown RBP12.74□□□□□ -0.37
CLIP4-204ENST00000404424 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
CLIP4-204ENST00000404424 ZNF589Q86UQ0 364 aaPredicted RBP12.74□□□□□ -0.37
CLIP4-204ENST00000404424 FAM200AQ8TCP9 573 aa12.74□□□□□ -0.37
CLIP4-204ENST00000404424 NUP62CLQ9H1M0 184 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms