RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 ARHGEF10O15013 1369 aa9.96□□□□□ -0.82
CEACAM1-208ENST00000403461 SLIT2O94813 1529 aa9.96□□□□□ -0.82
CEACAM1-208ENST00000403461 SRCAPQ6ZRS2 3230 aa9.95□□□□□ -0.82
CEACAM1-208ENST00000403461 BAG6P46379 1132 aa9.95□□□□□ -0.82
CEACAM1-208ENST00000403461 KRT27Q7Z3Y8 459 aa9.95□□□□□ -0.82
CEACAM1-208ENST00000403461 SNIP1Q8TAD8 396 aaKnown RBP9.95□□□□□ -0.82
CEACAM1-208ENST00000403461 C1orf115Q9H7X2 142 aa9.95□□□□□ -0.82
CEACAM1-208ENST00000403461 TLL2Q9Y6L7 1015 aa9.95□□□□□ -0.82
CEACAM1-208ENST00000403461 KIF1BO60333 1816 aa9.94□□□□□ -0.82
CEACAM1-208ENST00000403461 TNS3Q68CZ2 1445 aa9.94□□□□□ -0.82
CEACAM1-208ENST00000403461 TMEM132EQ6IEE7 984 aa9.94□□□□□ -0.82
CEACAM1-208ENST00000403461 DEFB132Q7Z7B7 95 aa9.94□□□□□ -0.82
CEACAM1-208ENST00000403461 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
CEACAM1-208ENST00000403461 KCTD15Q96SI1 283 aaPredicted RBP9.94□□□□□ -0.82
CEACAM1-208ENST00000403461 YTHDC2Q9H6S0 1430 aaKnown RBP9.93□□□□□ -0.82
CEACAM1-208ENST00000403461 SBNO1A3KN83 1393 aa9.93□□□□□ -0.82
CEACAM1-208ENST00000403461 PLEKHH1Q9ULM0 1364 aa9.93□□□□□ -0.82
CEACAM1-208ENST00000403461 ESPNB1AK53 854 aa9.93□□□□□ -0.82
CEACAM1-208ENST00000403461 GRM5P41594 1212 aa9.93□□□□□ -0.82
CEACAM1-208ENST00000403461 PIK3C2GO75747 1445 aa9.92□□□□□ -0.82
CEACAM1-208ENST00000403461 DHX57Q6P158 1386 aaKnown RBP9.92□□□□□ -0.82
CEACAM1-208ENST00000403461 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
CEACAM1-208ENST00000403461 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
CEACAM1-208ENST00000403461 ADH1CP00326 375 aa9.92□□□□□ -0.82
CEACAM1-208ENST00000403461 ALDH1A1P00352 501 aa9.92□□□□□ -0.82
CEACAM1-208ENST00000403461 SLFNL1Q499Z3 407 aa9.92□□□□□ -0.82
CEACAM1-208ENST00000403461 RNF20Q5VTR2 975 aa9.92□□□□□ -0.82
CEACAM1-208ENST00000403461 POGKQ9P215 609 aa9.92□□□□□ -0.82
CEACAM1-208ENST00000403461 SPATA31E1Q6ZUB1 1445 aa9.91□□□□□ -0.82
CEACAM1-208ENST00000403461 SMPD1P17405 629 aa9.91□□□□□ -0.82
CEACAM1-208ENST00000403461 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
CEACAM1-208ENST00000403461 NR5A1Q13285 461 aa9.91□□□□□ -0.82
CEACAM1-208ENST00000403461 PHTF2Q8N3S3 785 aa9.91□□□□□ -0.82
CEACAM1-208ENST00000403461 SERPINA10Q9UK55 444 aa9.91□□□□□ -0.82
CEACAM1-208ENST00000403461 EIF3AQ14152 1382 aaKnown RBP9.9□□□□□ -0.82
CEACAM1-208ENST00000403461 KIF1AQ12756 1690 aa9.9□□□□□ -0.82
CEACAM1-208ENST00000403461 J3QL48 77 aa9.9□□□□□ -0.82
CEACAM1-208ENST00000403461 SAFB2Q14151 953 aaKnown RBP eCLIP9.9□□□□□ -0.82
CEACAM1-208ENST00000403461 RNF135Q8IUD6 432 aa9.9□□□□□ -0.82
CEACAM1-208ENST00000403461 NFATC2IPQ8NCF5 419 aa9.9□□□□□ -0.82
CEACAM1-208ENST00000403461 PRAM1Q96QH2 718 aa9.9□□□□□ -0.82
CEACAM1-208ENST00000403461 UCN2Q96RP3 112 aa9.9□□□□□ -0.82
CEACAM1-208ENST00000403461 MPHOSPH9Q99550 1183 aa9.9□□□□□ -0.82
CEACAM1-208ENST00000403461 C14orf93Q9H972 538 aaKnown RBP9.9□□□□□ -0.82
CEACAM1-208ENST00000403461 GPRASP1Q5JY77 1395 aa9.89□□□□□ -0.83
CEACAM1-208ENST00000403461 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
CEACAM1-208ENST00000403461 GLI3P10071 1580 aa9.89□□□□□ -0.83
CEACAM1-208ENST00000403461 WFS1O76024 890 aa9.89□□□□□ -0.83
CEACAM1-208ENST00000403461 INTS6LQ5JSJ4 861 aaKnown RBP9.89□□□□□ -0.83
CEACAM1-208ENST00000403461 CCDC97Q96F63 343 aaPredicted RBP9.89□□□□□ -0.83
CEACAM1-208ENST00000403461 WASF2Q9Y6W5 498 aa9.89□□□□□ -0.83
CEACAM1-208ENST00000403461 ANKARQ7Z5J8 1434 aa9.89□□□□□ -0.83
CEACAM1-208ENST00000403461 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.88□□□□□ -0.83
CEACAM1-208ENST00000403461 NRXN1Q9ULB1 1477 aa9.88□□□□□ -0.83
CEACAM1-208ENST00000403461 FAM83GA6ND36 823 aa9.88□□□□□ -0.83
CEACAM1-208ENST00000403461 PIK3CDO00329 1044 aa9.88□□□□□ -0.83
CEACAM1-208ENST00000403461 FSHRP23945 695 aa9.88□□□□□ -0.83
CEACAM1-208ENST00000403461 CFAP70Q5T0N1 1121 aa9.88□□□□□ -0.83
CEACAM1-208ENST00000403461 CCDC82Q8N4S0 544 aa9.88□□□□□ -0.83
CEACAM1-208ENST00000403461 PMFBP1Q8TBY8 1022 aa9.88□□□□□ -0.83
CEACAM1-208ENST00000403461 BTG4Q9NY30 223 aa9.88□□□□□ -0.83
CEACAM1-208ENST00000403461 PPLO60437 1756 aa9.88□□□□□ -0.83
CEACAM1-208ENST00000403461 PPP1R12CQ9BZL4 782 aa9.87□□□□□ -0.83
CEACAM1-208ENST00000403461 ATP13A2Q9NQ11 1180 aa9.87□□□□□ -0.83
CEACAM1-208ENST00000403461 DHX9Q08211 1270 aaKnown RBP9.86□□□□□ -0.83
CEACAM1-208ENST00000403461 LCE2AQ5TA79 106 aaPredicted RBP9.86□□□□□ -0.83
CEACAM1-208ENST00000403461 TBC1D9Q6ZT07 1266 aa9.86□□□□□ -0.83
CEACAM1-208ENST00000403461 PRDM11Q9NQV5 511 aa9.86□□□□□ -0.83
CEACAM1-208ENST00000403461 TFIP11Q9UBB9 837 aaKnown RBP9.86□□□□□ -0.83
CEACAM1-208ENST00000403461 PALM3A6NDB9 673 aaPredicted RBP9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 ERVH48-1M5A8F1 160 aa9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 SKIP12755 728 aa9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 RAB15P59190 212 aa9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 NNTQ13423 1086 aa9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 MAP7D1Q3KQU3 841 aa9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 CCDC116Q8IYX3 515 aa9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 PLPP7Q8NBV4 271 aa9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 NGDNQ8NEJ9 315 aaKnown RBP9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 HPS1Q92902 700 aa9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 CCDC85AQ96PX6 553 aaPredicted RBP9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 KNDC1Q76NI1 1749 aa9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 FMN2Q9NZ56 1722 aa9.85□□□□□ -0.83
CEACAM1-208ENST00000403461 EP400Q96L91 3159 aa9.84□□□□□ -0.83
CEACAM1-208ENST00000403461 ATP9BO43861 1147 aa9.84□□□□□ -0.83
CEACAM1-208ENST00000403461 NR3C2P08235 984 aa9.84□□□□□ -0.83
CEACAM1-208ENST00000403461 SPATA31A5Q5VU36 1347 aa9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 SPATA31A7Q8IWB4 1347 aa9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 LRP5O75197 1615 aa9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 MARF1Q9Y4F3 1742 aaKnown RBP9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 LZTS3O60299 673 aaPredicted RBP9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 SNRPBP14678 240 aaKnown RBP9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 R3HDM1Q15032 1099 aaKnown RBP9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 TSGA10IPQ3SY00 556 aa9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 PPP1R26Q5T8A7 1209 aaPredicted RBP9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 FAM196AQ6ZSG2 479 aa9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 HIRIP3Q9BW71 556 aaPredicted RBP9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 SENP2Q9HC62 589 aa9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 DOLKQ9UPQ8 538 aa9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 PCDHB11Q9Y5F2 797 aa9.83□□□□□ -0.84
CEACAM1-208ENST00000403461 DLC1Q96QB1 1528 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms