RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CAPNS2Q96L46 248 aa16.03■□□□□ 0.16
SPTLC1P3-201ENST00000403408 PSMD1Q99460 953 aa16.03■□□□□ 0.16
SPTLC1P3-201ENST00000403408 GJA3Q9Y6H8 435 aa16.03■□□□□ 0.16
SPTLC1P3-201ENST00000403408 CASP8AP2Q9UKL3 1982 aa16.03■□□□□ 0.16
SPTLC1P3-201ENST00000403408 AOC2O75106 756 aa16.02■□□□□ 0.16
SPTLC1P3-201ENST00000403408 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.16
SPTLC1P3-201ENST00000403408 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
SPTLC1P3-201ENST00000403408 NUP98P52948 1817 aa16.01■□□□□ 0.15
SPTLC1P3-201ENST00000403408 NPM2Q86SE8 214 aaKnown RBP16.01■□□□□ 0.15
SPTLC1P3-201ENST00000403408 ZNF652Q9Y2D9 606 aa16.01■□□□□ 0.15
SPTLC1P3-201ENST00000403408 CCDC85CA6NKD9 419 aa16■□□□□ 0.15
SPTLC1P3-201ENST00000403408 RGL2O15211 777 aa15.99■□□□□ 0.15
SPTLC1P3-201ENST00000403408 ALDH1B1P30837 517 aa15.99■□□□□ 0.15
SPTLC1P3-201ENST00000403408 GRM1Q13255 1194 aa15.99■□□□□ 0.15
SPTLC1P3-201ENST00000403408 GPR101Q96P66 508 aaPredicted RBP15.99■□□□□ 0.15
SPTLC1P3-201ENST00000403408 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
SPTLC1P3-201ENST00000403408 NPC1L1Q9UHC9 1359 aa15.99■□□□□ 0.15
SPTLC1P3-201ENST00000403408 UBN2Q6ZU65 1347 aa15.98■□□□□ 0.15
SPTLC1P3-201ENST00000403408 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
SPTLC1P3-201ENST00000403408 TTLL7Q6ZT98 887 aa15.98■□□□□ 0.15
SPTLC1P3-201ENST00000403408 TLL2Q9Y6L7 1015 aa15.98■□□□□ 0.15
SPTLC1P3-201ENST00000403408 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
SPTLC1P3-201ENST00000403408 RIC1Q4ADV7 1423 aa15.96■□□□□ 0.15
SPTLC1P3-201ENST00000403408 TCERG1O14776 1098 aaKnown RBP15.96■□□□□ 0.15
SPTLC1P3-201ENST00000403408 EIF6P56537 245 aaKnown RBP15.96■□□□□ 0.15
SPTLC1P3-201ENST00000403408 MLLT1Q03111 559 aaPredicted RBP15.96■□□□□ 0.15
SPTLC1P3-201ENST00000403408 SUSD4Q5VX71 490 aa15.96■□□□□ 0.15
SPTLC1P3-201ENST00000403408 PAXIP1Q6ZW49 1069 aaPredicted RBP15.96■□□□□ 0.15
SPTLC1P3-201ENST00000403408 NGEFQ8N5V2 710 aa15.96■□□□□ 0.15
SPTLC1P3-201ENST00000403408 ZIC5Q96T25 663 aa15.96■□□□□ 0.15
SPTLC1P3-201ENST00000403408 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
SPTLC1P3-201ENST00000403408 GPTP24298 496 aa15.95■□□□□ 0.14
SPTLC1P3-201ENST00000403408 USP50Q70EL3 339 aaPredicted RBP15.95■□□□□ 0.14
SPTLC1P3-201ENST00000403408 LARGE2Q8N3Y3 721 aa15.95■□□□□ 0.14
SPTLC1P3-201ENST00000403408 MCOLN1Q9GZU1 580 aa15.95■□□□□ 0.14
SPTLC1P3-201ENST00000403408 GTF2E1P29083 439 aaPredicted RBP15.94■□□□□ 0.14
SPTLC1P3-201ENST00000403408 LMOD1P29536 600 aaPredicted RBP15.94■□□□□ 0.14
SPTLC1P3-201ENST00000403408 HIRAP54198 1017 aaPredicted RBP15.94■□□□□ 0.14
SPTLC1P3-201ENST00000403408 DLK2Q6UY11 383 aa15.94■□□□□ 0.14
SPTLC1P3-201ENST00000403408 SAPCD2Q86UD0 394 aa15.94■□□□□ 0.14
SPTLC1P3-201ENST00000403408 GLIS2Q9BZE0 524 aaPredicted RBP15.94■□□□□ 0.14
SPTLC1P3-201ENST00000403408 MAP3K15Q6ZN16 1313 aa15.94■□□□□ 0.14
SPTLC1P3-201ENST00000403408 SHTN1A0MZ66 631 aa15.93■□□□□ 0.14
SPTLC1P3-201ENST00000403408 NTSR2O95665 410 aa15.93■□□□□ 0.14
SPTLC1P3-201ENST00000403408 ECE1P42892 770 aa15.93■□□□□ 0.14
SPTLC1P3-201ENST00000403408 AOC3Q16853 763 aa15.93■□□□□ 0.14
SPTLC1P3-201ENST00000403408 CC2D2BQ6DHV5 1058 aa15.93■□□□□ 0.14
SPTLC1P3-201ENST00000403408 GPRC5DQ9NZD1 345 aa15.93■□□□□ 0.14
SPTLC1P3-201ENST00000403408 KDM3BQ7LBC6 1761 aa15.92■□□□□ 0.14
SPTLC1P3-201ENST00000403408 ERVV-1B6SEH8 477 aa15.92■□□□□ 0.14
SPTLC1P3-201ENST00000403408 PPEF1O14829 653 aaPredicted RBP15.92■□□□□ 0.14
SPTLC1P3-201ENST00000403408 MAP2K2P36507 400 aa15.92■□□□□ 0.14
SPTLC1P3-201ENST00000403408 CXCL9Q07325 125 aa15.92■□□□□ 0.14
SPTLC1P3-201ENST00000403408 ZNF34Q8IZ26 560 aa15.92■□□□□ 0.14
SPTLC1P3-201ENST00000403408 CRAMP1Q96RY5 1269 aa15.92■□□□□ 0.14
SPTLC1P3-201ENST00000403408 CELF2O95319 508 aaKnown RBP15.91■□□□□ 0.14
SPTLC1P3-201ENST00000403408 GMPSP49915 693 aaPredicted RBP15.91■□□□□ 0.14
SPTLC1P3-201ENST00000403408 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
SPTLC1P3-201ENST00000403408 NYXQ9GZU5 481 aa15.91■□□□□ 0.14
SPTLC1P3-201ENST00000403408 ZBTB3Q9H5J0 574 aa15.91■□□□□ 0.14
SPTLC1P3-201ENST00000403408 ADARB2Q9NS39 739 aaKnown RBP15.91■□□□□ 0.14
SPTLC1P3-201ENST00000403408 PGAP2Q9UHJ9 254 aa15.91■□□□□ 0.14
SPTLC1P3-201ENST00000403408 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
SPTLC1P3-201ENST00000403408 DLG5Q8TDM6 1919 aa15.91■□□□□ 0.14
SPTLC1P3-201ENST00000403408 IBTKQ9P2D0 1353 aaPredicted RBP15.9■□□□□ 0.14
SPTLC1P3-201ENST00000403408 PPIP5K2O43314 1243 aa15.9■□□□□ 0.14
SPTLC1P3-201ENST00000403408 U2AF1L5P0DN76 240 aaPredicted RBP15.9■□□□□ 0.14
SPTLC1P3-201ENST00000403408 U2AF1Q01081 240 aaKnown RBP eCLIP15.9■□□□□ 0.14
SPTLC1P3-201ENST00000403408 LRP10Q7Z4F1 713 aa15.9■□□□□ 0.14
SPTLC1P3-201ENST00000403408 NIM1KQ8IY84 436 aa15.9■□□□□ 0.14
SPTLC1P3-201ENST00000403408 TRPM4Q8TD43 1214 aa15.9■□□□□ 0.14
SPTLC1P3-201ENST00000403408 RTF1Q92541 710 aaKnown RBP15.9■□□□□ 0.14
SPTLC1P3-201ENST00000403408 RPGRQ92834 1020 aaKnown RBP15.9■□□□□ 0.14
SPTLC1P3-201ENST00000403408 TAF1P21675 1872 aa15.9■□□□□ 0.14
SPTLC1P3-201ENST00000403408 POLR2AP24928 1970 aaKnown RBP15.89■□□□□ 0.13
SPTLC1P3-201ENST00000403408 HTATSF1O43719 755 aaKnown RBP15.89■□□□□ 0.13
SPTLC1P3-201ENST00000403408 MYL6BP14649 208 aa15.89■□□□□ 0.13
SPTLC1P3-201ENST00000403408 EIF4A1P60842 406 aaKnown RBP15.89■□□□□ 0.13
SPTLC1P3-201ENST00000403408 CIAPIN1Q6FI81 312 aa15.89■□□□□ 0.13
SPTLC1P3-201ENST00000403408 RBM17Q96I25 401 aaKnown RBP15.89■□□□□ 0.13
SPTLC1P3-201ENST00000403408 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
SPTLC1P3-201ENST00000403408 BEGAINQ9BUH8 593 aa15.89■□□□□ 0.13
SPTLC1P3-201ENST00000403408 LAMB2P55268 1798 aa15.88■□□□□ 0.13
SPTLC1P3-201ENST00000403408 PPP2R1AP30153 589 aa15.88■□□□□ 0.13
SPTLC1P3-201ENST00000403408 RTFDC1Q9BY42 306 aaPredicted RBP15.88■□□□□ 0.13
SPTLC1P3-201ENST00000403408 ATP6V0A2Q9Y487 856 aa15.88■□□□□ 0.13
SPTLC1P3-201ENST00000403408 ABCC4O15439 1325 aa15.88■□□□□ 0.13
SPTLC1P3-201ENST00000403408 YDJCA8MPS7 323 aa15.87■□□□□ 0.13
SPTLC1P3-201ENST00000403408 BRPF1P55201 1214 aaPredicted RBP15.87■□□□□ 0.13
SPTLC1P3-201ENST00000403408 HHIPL1Q96JK4 782 aa15.87■□□□□ 0.13
SPTLC1P3-201ENST00000403408 ZNRF3Q9ULT6 936 aa15.87■□□□□ 0.13
SPTLC1P3-201ENST00000403408 RAD17O75943 681 aa15.86■□□□□ 0.13
SPTLC1P3-201ENST00000403408 PDIA6Q15084 440 aa15.86■□□□□ 0.13
SPTLC1P3-201ENST00000403408 GRIPAP1Q4V328 841 aa15.86■□□□□ 0.13
SPTLC1P3-201ENST00000403408 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
SPTLC1P3-201ENST00000403408 ZNF408Q9H9D4 720 aa15.86■□□□□ 0.13
SPTLC1P3-201ENST00000403408 DUOX1Q9NRD9 1551 aa15.86■□□□□ 0.13
SPTLC1P3-201ENST00000403408 DGKZQ13574 1117 aa15.85■□□□□ 0.13
SPTLC1P3-201ENST00000403408 PROSER3Q2NL68 480 aa15.85■□□□□ 0.13
SPTLC1P3-201ENST00000403408 SLC10A5Q5PT55 438 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms