RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 F6X3S4 739 aa22.11■■□□□ 1.13
HDAC11-202ENST00000402259 NPHP1O15259 732 aa22.11■■□□□ 1.13
HDAC11-202ENST00000402259 IPO8O15397 1037 aaKnown RBP22.11■■□□□ 1.13
HDAC11-202ENST00000402259 BCAR3O75815 825 aa22.11■■□□□ 1.13
HDAC11-202ENST00000402259 IGKV5-2P06315 115 aa22.11■■□□□ 1.13
HDAC11-202ENST00000402259 TGFB2P61812 414 aa22.11■■□□□ 1.13
HDAC11-202ENST00000402259 CWC25Q9NXE8 425 aaPredicted RBP22.11■■□□□ 1.13
HDAC11-202ENST00000402259 NOB1Q9ULX3 412 aaKnown RBP22.11■■□□□ 1.13
HDAC11-202ENST00000402259 NEURL1BA8MQ27 555 aa22.1■■□□□ 1.13
HDAC11-202ENST00000402259 GTF2E1P29083 439 aaPredicted RBP22.1■■□□□ 1.13
HDAC11-202ENST00000402259 SH3TC1Q8TE82 1336 aa22.09■■□□□ 1.13
HDAC11-202ENST00000402259 FAM177BA6PVY3 158 aa22.09■■□□□ 1.13
HDAC11-202ENST00000402259 PDE6BP35913 854 aa22.09■■□□□ 1.13
HDAC11-202ENST00000402259 SLC10A5Q5PT55 438 aa22.09■■□□□ 1.13
HDAC11-202ENST00000402259 BEND3Q5T5X7 828 aa22.09■■□□□ 1.13
HDAC11-202ENST00000402259 TRMT112Q9UI30 125 aaKnown RBP22.09■■□□□ 1.13
HDAC11-202ENST00000402259 LAMB2P55268 1798 aa22.08■■□□□ 1.13
HDAC11-202ENST00000402259 DLEC1Q9Y238 1755 aa22.08■■□□□ 1.13
HDAC11-202ENST00000402259 ALDH1L1O75891 902 aa22.08■■□□□ 1.13
HDAC11-202ENST00000402259 ERFEQ4G0M1 354 aa22.08■■□□□ 1.13
HDAC11-202ENST00000402259 KLHL34Q8N239 644 aa22.08■■□□□ 1.13
HDAC11-202ENST00000402259 ZBTB38Q8NAP3 1195 aaPredicted RBP22.08■■□□□ 1.13
HDAC11-202ENST00000402259 RCAN3Q9UKA8 241 aa22.08■■□□□ 1.13
HDAC11-202ENST00000402259 ABCC12Q96J65 1359 aa22.08■■□□□ 1.12
HDAC11-202ENST00000402259 KLRG2A4D1S0 409 aaPredicted RBP22.07■■□□□ 1.12
HDAC11-202ENST00000402259 PCCAP05165 728 aaPredicted RBP22.07■■□□□ 1.12
HDAC11-202ENST00000402259 CWF19L2Q2TBE0 894 aaKnown RBP22.07■■□□□ 1.12
HDAC11-202ENST00000402259 NUTM1Q86Y26 1132 aa22.07■■□□□ 1.12
HDAC11-202ENST00000402259 HSP90B1P14625 803 aaKnown RBP22.06■■□□□ 1.12
HDAC11-202ENST00000402259 GCKRQ14397 625 aa22.06■■□□□ 1.12
HDAC11-202ENST00000402259 ATF7IPQ6VMQ6 1270 aa22.06■■□□□ 1.12
HDAC11-202ENST00000402259 SRCIN1Q9C0H9 1055 aa22.06■■□□□ 1.12
HDAC11-202ENST00000402259 DDX60Q8IY21 1712 aaKnown RBP22.06■■□□□ 1.12
HDAC11-202ENST00000402259 BRCA1P38398 1863 aaKnown RBP22.05■■□□□ 1.12
HDAC11-202ENST00000402259 TNRC6CQ9HCJ0 1690 aaKnown RBP22.05■■□□□ 1.12
HDAC11-202ENST00000402259 ZKSCAN2Q63HK3 967 aa22.05■■□□□ 1.12
HDAC11-202ENST00000402259 SLC4A10Q6U841 1118 aa22.05■■□□□ 1.12
HDAC11-202ENST00000402259 NLGN2Q8NFZ4 835 aa22.05■■□□□ 1.12
HDAC11-202ENST00000402259 CDHR2Q9BYE9 1310 aa22.05■■□□□ 1.12
HDAC11-202ENST00000402259 COL11A2P13942 1736 aaPredicted RBP22.04■■□□□ 1.12
HDAC11-202ENST00000402259 CCDC24Q8N4L8 307 aa22.04■■□□□ 1.12
HDAC11-202ENST00000402259 FAM89AQ96GI7 184 aa22.04■■□□□ 1.12
HDAC11-202ENST00000402259 ABCC4O15439 1325 aa22.04■■□□□ 1.12
HDAC11-202ENST00000402259 H0YIN7 160 aa22.03■■□□□ 1.12
HDAC11-202ENST00000402259 H7C1W4 665 aa22.03■■□□□ 1.12
HDAC11-202ENST00000402259 TRIM27P14373 513 aa22.03■■□□□ 1.12
HDAC11-202ENST00000402259 CCT4P50991 539 aaKnown RBP22.03■■□□□ 1.12
HDAC11-202ENST00000402259 CRY2Q49AN0 593 aa22.03■■□□□ 1.12
HDAC11-202ENST00000402259 FRAT1Q92837 279 aaPredicted RBP22.03■■□□□ 1.12
HDAC11-202ENST00000402259 SRCAPQ6ZRS2 3230 aa22.03■■□□□ 1.12
HDAC11-202ENST00000402259 DPEP1P16444 411 aa22.02■■□□□ 1.12
HDAC11-202ENST00000402259 C2CD5Q86YS7 1000 aa22.02■■□□□ 1.12
HDAC11-202ENST00000402259 NLRP3Q96P20 1036 aa22.02■■□□□ 1.12
HDAC11-202ENST00000402259 IRS4O14654 1257 aaPredicted RBP22.01■■□□□ 1.11
HDAC11-202ENST00000402259 KCNA3P22001 575 aa22.01■■□□□ 1.11
HDAC11-202ENST00000402259 A0A0G2JLW4 131 aa22■■□□□ 1.11
HDAC11-202ENST00000402259 SRGNP10124 158 aa22■■□□□ 1.11
HDAC11-202ENST00000402259 INTS3Q68E01 1043 aaKnown RBP22■■□□□ 1.11
HDAC11-202ENST00000402259 STYK1Q6J9G0 422 aa22■■□□□ 1.11
HDAC11-202ENST00000402259 SYNE4Q8N205 404 aa22■■□□□ 1.11
HDAC11-202ENST00000402259 MYH3P11055 1940 aa22■■□□□ 1.11
HDAC11-202ENST00000402259 GRM8O00222 908 aa21.99■■□□□ 1.11
HDAC11-202ENST00000402259 HCLS1P14317 486 aaPredicted RBP21.99■■□□□ 1.11
HDAC11-202ENST00000402259 CHRNA5P30532 468 aa21.99■■□□□ 1.11
HDAC11-202ENST00000402259 CASP7P55210 303 aa21.99■■□□□ 1.11
HDAC11-202ENST00000402259 UBE3BQ7Z3V4 1068 aa21.99■■□□□ 1.11
HDAC11-202ENST00000402259 MASTLQ96GX5 879 aa21.99■■□□□ 1.11
HDAC11-202ENST00000402259 UTYO14607 1347 aa21.99■■□□□ 1.11
HDAC11-202ENST00000402259 PDE8AO60658 829 aa21.98■■□□□ 1.11
HDAC11-202ENST00000402259 MS4A1P11836 297 aa21.98■■□□□ 1.11
HDAC11-202ENST00000402259 NPR1P16066 1061 aa21.98■■□□□ 1.11
HDAC11-202ENST00000402259 HOXA10P31260 410 aaPredicted RBP21.98■■□□□ 1.11
HDAC11-202ENST00000402259 SF3B3Q15393 1217 aaKnown RBP21.98■■□□□ 1.11
HDAC11-202ENST00000402259 PLA2G12BQ9BX93 195 aa21.98■■□□□ 1.11
HDAC11-202ENST00000402259 C9orf78Q9NZ63 289 aaPredicted RBP21.98■■□□□ 1.11
HDAC11-202ENST00000402259 PIM2Q9P1W9 311 aa21.98■■□□□ 1.11
HDAC11-202ENST00000402259 RTL5Q5HYW3 569 aaPredicted RBP21.97■■□□□ 1.11
HDAC11-202ENST00000402259 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.97■■□□□ 1.11
HDAC11-202ENST00000402259 DZIP1LQ8IYY4 767 aaKnown RBP21.96■■□□□ 1.11
HDAC11-202ENST00000402259 CNKSR1Q969H4 720 aa21.96■■□□□ 1.11
HDAC11-202ENST00000402259 ARFGEF1Q9Y6D6 1849 aa21.96■■□□□ 1.11
HDAC11-202ENST00000402259 C3orf67Q6ZVT6 689 aa21.95■■□□□ 1.1
HDAC11-202ENST00000402259 RPGRQ92834 1020 aaKnown RBP21.95■■□□□ 1.1
HDAC11-202ENST00000402259 CRAMP1Q96RY5 1269 aa21.95■■□□□ 1.1
HDAC11-202ENST00000402259 ALDH1B1P30837 517 aa21.94■■□□□ 1.1
HDAC11-202ENST00000402259 FTSJ3Q8IY81 847 aaKnown RBP21.94■■□□□ 1.1
HDAC11-202ENST00000402259 TTLL6Q8N841 843 aa21.94■■□□□ 1.1
HDAC11-202ENST00000402259 JARID2Q92833 1246 aaPredicted RBP21.94■■□□□ 1.1
HDAC11-202ENST00000402259 ZNF622Q969S3 477 aaKnown RBP eCLIP21.94■■□□□ 1.1
HDAC11-202ENST00000402259 CLUAP1Q96AJ1 413 aa21.94■■□□□ 1.1
HDAC11-202ENST00000402259 USP44Q9H0E7 712 aa21.94■■□□□ 1.1
HDAC11-202ENST00000402259 TNNQ9UQP3 1299 aa21.94■■□□□ 1.1
HDAC11-202ENST00000402259 CTSWP56202 376 aa21.93■■□□□ 1.1
HDAC11-202ENST00000402259 DALRD3Q5D0E6 543 aaKnown RBP21.93■■□□□ 1.1
HDAC11-202ENST00000402259 RBM17Q96I25 401 aaKnown RBP21.93■■□□□ 1.1
HDAC11-202ENST00000402259 RTL9Q8NET4 1388 aa21.92■■□□□ 1.1
HDAC11-202ENST00000402259 NBPF7P0C2Y1 421 aaPredicted RBP21.92■■□□□ 1.1
HDAC11-202ENST00000402259 CCDC152Q4G0S7 254 aa21.92■■□□□ 1.1
HDAC11-202ENST00000402259 HDAC5Q9UQL6 1122 aa21.92■■□□□ 1.1
HDAC11-202ENST00000402259 CACNA1SQ13698 1873 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms