RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 CAPN10Q9HC96 672 aa4.9□□□□□ -1.63
CLHC1-201ENST00000401408 TRPM2O94759 1503 aa4.9□□□□□ -1.63
CLHC1-201ENST00000401408 TMEM131LA2VDJ0 1609 aa4.9□□□□□ -1.63
CLHC1-201ENST00000401408 VDRP11473 427 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 PDE4AP27815 886 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 MAN1A1P33908 653 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 PDE6BP35913 854 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 SERPINB4P48594 390 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 ANP32BQ92688 251 aaKnown RBP4.89□□□□□ -1.63
CLHC1-201ENST00000401408 MKL1Q969V6 931 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 ARMC5Q96C12 935 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 EPAS1Q99814 870 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 KLF15Q9UIH9 416 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 PTPRUQ92729 1446 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 USP5P45974 858 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 TMEM259Q4ZIN3 620 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 IFNL1Q8IU54 200 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 TSC1Q92574 1164 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 MPHOSPH6Q99547 160 aaKnown RBP4.89□□□□□ -1.63
CLHC1-201ENST00000401408 CEP126Q9P2H0 1117 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 TFIP11Q9UBB9 837 aaKnown RBP4.89□□□□□ -1.63
CLHC1-201ENST00000401408 USP21Q9UK80 565 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 TNS1Q9HBL0 1735 aaKnown RBP4.89□□□□□ -1.63
CLHC1-201ENST00000401408 EHBP1L1Q8N3D4 1523 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 DISP2A7MBM2 1401 aa4.89□□□□□ -1.63
CLHC1-201ENST00000401408 SOS2Q07890 1332 aaPredicted RBP4.89□□□□□ -1.63
CLHC1-201ENST00000401408 PCNTO95613 3336 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 NALCNQ8IZF0 1738 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 DNAJC6O75061 913 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 LDHAP00338 332 aaKnown RBP4.88□□□□□ -1.63
CLHC1-201ENST00000401408 L1TD1Q5T7N2 865 aaKnown RBP4.88□□□□□ -1.63
CLHC1-201ENST00000401408 TTC30BQ8N4P2 665 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 ENOX1Q8TC92 643 aaKnown RBP4.88□□□□□ -1.63
CLHC1-201ENST00000401408 NEUROD6Q96NK8 337 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 ZHX3Q9H4I2 956 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 GEMIN8Q9NWZ8 242 aaKnown RBP4.88□□□□□ -1.63
CLHC1-201ENST00000401408 NLRP2Q9NX02 1062 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 CHD4Q14839 1912 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 RALGAPBQ86X10 1494 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 NRXN3Q9Y4C0 1643 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 SLIT2O94813 1529 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 DUOX2Q9NRD8 1548 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 GCC2Q8IWJ2 1684 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 TCERG1O14776 1098 aaKnown RBP4.88□□□□□ -1.63
CLHC1-201ENST00000401408 DNAJA1P31689 397 aaKnown RBP4.88□□□□□ -1.63
CLHC1-201ENST00000401408 POU5F1BQ06416 359 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 SEMA3FQ13275 785 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 LAPTM4AQ15012 233 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 NBPF9Q3BBW0 867 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 ODR4Q5SWX8 454 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 TTC39BQ5VTQ0 682 aaPredicted RBP4.88□□□□□ -1.63
CLHC1-201ENST00000401408 CCDC174Q6PII3 467 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 DRC7Q8IY82 874 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 SLC43A3Q8NBI5 491 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 GJD4Q96KN9 370 aaPredicted RBP4.88□□□□□ -1.63
CLHC1-201ENST00000401408 CDC5LQ99459 802 aaKnown RBP4.88□□□□□ -1.63
CLHC1-201ENST00000401408 OSBPL2Q9H1P3 480 aa4.88□□□□□ -1.63
CLHC1-201ENST00000401408 TTF2Q9UNY4 1162 aaKnown RBP4.88□□□□□ -1.63
CLHC1-201ENST00000401408 KAT6BQ8WYB5 2073 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 CAMTA1Q9Y6Y1 1673 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 PDGFRBP09619 1106 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 PYGBP11216 843 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 ATF3P18847 181 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 RASSF7Q02833 373 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 TMEM164Q5U3C3 297 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 PPP1R18Q6NYC8 613 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 PAF1Q8N7H5 531 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 PRPF38AQ8NAV1 312 aaKnown RBP4.87□□□□□ -1.63
CLHC1-201ENST00000401408 C8orf48Q96LL4 319 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 BEGAINQ9BUH8 593 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 PUF60Q9UHX1 559 aaKnown RBP4.87□□□□□ -1.63
CLHC1-201ENST00000401408 RGPD1P0DJD0 1748 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 PSDA5PKW4 1024 aaPredicted RBP4.87□□□□□ -1.63
CLHC1-201ENST00000401408 TIMM44O43615 452 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 TERF1P54274 439 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 RBL2Q08999 1139 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 EGFL6Q8IUX8 553 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 SNRNP27Q8WVK2 155 aaKnown RBP4.87□□□□□ -1.63
CLHC1-201ENST00000401408 CCSER2Q9H7U1 834 aa4.87□□□□□ -1.63
CLHC1-201ENST00000401408 PTPN23Q9H3S7 1636 aa4.86□□□□□ -1.63
CLHC1-201ENST00000401408 FGAP02671 866 aa4.86□□□□□ -1.63
CLHC1-201ENST00000401408 LDHCP07864 332 aa4.86□□□□□ -1.63
CLHC1-201ENST00000401408 FAM200BP0CF97 657 aa4.86□□□□□ -1.63
CLHC1-201ENST00000401408 CLK2P49760 499 aaKnown RBP4.86□□□□□ -1.63
CLHC1-201ENST00000401408 ZRSR2Q15696 482 aaKnown RBP4.86□□□□□ -1.63
CLHC1-201ENST00000401408 MYSM1Q5VVJ2 828 aa4.86□□□□□ -1.63
CLHC1-201ENST00000401408 STK32AQ8WU08 396 aa4.86□□□□□ -1.63
CLHC1-201ENST00000401408 DDX17Q92841 729 aaKnown RBP4.86□□□□□ -1.63
CLHC1-201ENST00000401408 RREB1Q92766 1687 aa4.86□□□□□ -1.63
CLHC1-201ENST00000401408 RIMS2Q9UQ26 1411 aa4.86□□□□□ -1.63
CLHC1-201ENST00000401408 BICDL2A1A5D9 508 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 ADAMTS2O95450 1211 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 KCTD2Q14681 263 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 CCSAPQ6IQ19 270 aaPredicted RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 PPARGC1BQ86YN6 1023 aaKnown RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 ZNF784Q8NCA9 323 aaPredicted RBP4.85□□□□□ -1.63
CLHC1-201ENST00000401408 CASS4Q9NQ75 786 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 ERBINQ96RT1 1412 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 ADGRL3Q9HAR2 1447 aa4.85□□□□□ -1.63
CLHC1-201ENST00000401408 NWD2Q9ULI1 1742 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms