RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 FAM196BA6NMK8 535 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 MAFGO15525 162 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 PADI6Q6TGC4 694 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 BRINP3Q76B58 766 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 ARMC5Q96C12 935 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 PCGF6Q9BYE7 350 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 STK26Q9P289 416 aa7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 DMGDHQ9UI17 866 aaKnown RBP7.1□□□□□ -1.27
HMGB3P7-201ENST00000400214 USP32Q8NFA0 1604 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 SETQ01105 290 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 NEUROD1Q13562 356 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 HSP90AB2PQ58FF8 381 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 PRPF38BQ5VTL8 546 aaKnown RBP7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 NYAP1Q6ZVC0 841 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 SMC5Q8IY18 1101 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 FAM200AQ8TCP9 573 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 PMM1Q92871 262 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 EVI5LQ96CN4 794 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 SGSM3Q96HU1 749 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 PRAM1Q96QH2 718 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 CCSER2Q9H7U1 834 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 NLRP2Q9NX02 1062 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 GABBR1Q9UBS5 961 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 DCTN4Q9UJW0 460 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 ITSN1Q15811 1721 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 QRICH2Q9H0J4 1663 aa7.09□□□□□ -1.27
HMGB3P7-201ENST00000400214 GPRASP1Q5JY77 1395 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 TNNI2P48788 182 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 COL19A1Q14993 1142 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 RALBP1Q15311 655 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 NBPF1Q3BBV0 1214 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 ZNF746Q6NUN9 644 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 TMEM87AQ8NBN3 555 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 BRINP2Q9C0B6 783 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 TGIF2Q9GZN2 237 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 ACBD3Q9H3P7 528 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 ZBTB3Q9H5J0 574 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 EGFL7Q9UHF1 273 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 TRAK1Q9UPV9 953 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 COL4A3BPQ9Y5P4 624 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 ANKARQ7Z5J8 1434 aa7.08□□□□□ -1.28
HMGB3P7-201ENST00000400214 TOPAZ1Q8N9V7 1692 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 GFRA3O60609 400 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 ICMTO60725 284 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 DNAJA1P31689 397 aaKnown RBP7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 RBL2Q08999 1139 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 PTK7Q13308 1070 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 FOXD4L6Q3SYB3 417 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 PPP1R18Q6NYC8 613 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 FOXD4L3Q6VB84 417 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 GLYCTKQ8IVS8 523 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 ZSCAN29Q8IWY8 852 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 DEPDC4Q8N2C3 294 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 ANKK1Q8NFD2 765 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 POGKQ9P215 609 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 MED1Q15648 1581 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 TONSLQ96HA7 1378 aa7.07□□□□□ -1.28
HMGB3P7-201ENST00000400214 TULP4Q9NRJ4 1543 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 RALGAPBQ86X10 1494 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 COL22A1Q8NFW1 1626 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 USP17L5A8MUK1 530 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 U2SURPO15042 1029 aaKnown RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 SKIP12755 728 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 EIF4G2P78344 907 aaKnown RBP eCLIP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 KCNC4Q03721 635 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 BMS1Q14692 1282 aaKnown RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 ECM1Q16610 540 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 NBPF8Q3BBV2 869 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 PLEKHG6Q3KR16 790 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 ZCRB1Q8TBF4 217 aaKnown RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 ORAI2Q96SN7 254 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 PLCD4Q9BRC7 762 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 TERF2IPQ9NYB0 399 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 MKRN1Q9UHC7 482 aaKnown RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 EIF3AQ14152 1382 aaKnown RBP7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 JCADQ9P266 1359 aa7.06□□□□□ -1.28
HMGB3P7-201ENST00000400214 PXDNQ92626 1479 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 SOS2Q07890 1332 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 MARF1Q9Y4F3 1742 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 WASLO00401 505 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 CREB3O43889 395 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 P4HBP07237 508 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 RASA1P20936 1047 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 FANCCQ00597 558 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 RNF187Q5TA31 235 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 LARP1Q6PKG0 1096 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 C1orf216Q8TAB5 229 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 FAM161BQ96MY7 647 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 GMLQ99445 158 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 EPAS1Q99814 870 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 OSBPL2Q9H1P3 480 aa7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 LAS1LQ9Y4W2 734 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 MRPL42Q9Y6G3 142 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 ROCK2O75116 1388 aaKnown RBP7.05□□□□□ -1.28
HMGB3P7-201ENST00000400214 TRPM3Q9HCF6 1732 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P7-201ENST00000400214 SPATA31A6Q5VVP1 1343 aa7.04□□□□□ -1.28
HMGB3P7-201ENST00000400214 SOWAHBA6NEL2 793 aa7.04□□□□□ -1.28
HMGB3P7-201ENST00000400214 NRG2O14511 850 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms