RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 V9GYY5 206 aaPredicted RBP15.38■□□□□ 0.05
LDLRAD4-203ENST00000399848 TCERG1LQ5VWI1 586 aa15.38■□□□□ 0.05
LDLRAD4-203ENST00000399848 LRSAM1Q6UWE0 723 aa15.38■□□□□ 0.05
LDLRAD4-203ENST00000399848 ZSCAN16Q9H4T2 348 aaPredicted RBP15.38■□□□□ 0.05
LDLRAD4-203ENST00000399848 STX6O43752 255 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 RRS1Q15050 365 aaKnown RBP15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 SELENOOQ9BVL4 669 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 ADAMTS2O95450 1211 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 ZNF165P49910 485 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 DNAAF4Q8WXU2 420 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 IPO4Q8TEX9 1081 aaKnown RBP15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 NBPF1Q3BBV0 1214 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 IQCGQ9H095 443 aaKnown RBP15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 TNPO1Q92973 898 aaKnown RBP15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 HMG20BQ9P0W2 317 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 PRPHP41219 470 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 IGF1RP08069 1367 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 CPLX3Q8WVH0 158 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
LDLRAD4-203ENST00000399848 DAAM2Q86T65 1068 aa15.36■□□□□ 0.05
LDLRAD4-203ENST00000399848 KRT222Q8N1A0 295 aa15.36■□□□□ 0.05
LDLRAD4-203ENST00000399848 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.36■□□□□ 0.05
LDLRAD4-203ENST00000399848 UBA7P41226 1012 aa15.36■□□□□ 0.05
LDLRAD4-203ENST00000399848 USP37Q86T82 979 aa15.36■□□□□ 0.05
LDLRAD4-203ENST00000399848 GOLGA8AA7E2F4 631 aa15.36■□□□□ 0.05
LDLRAD4-203ENST00000399848 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
LDLRAD4-203ENST00000399848 RAD54L2Q9Y4B4 1467 aa15.35■□□□□ 0.05
LDLRAD4-203ENST00000399848 GUCY1B3Q02153 619 aa15.35■□□□□ 0.05
LDLRAD4-203ENST00000399848 CCDC102BQ68D86 513 aa15.35■□□□□ 0.05
LDLRAD4-203ENST00000399848 EXOC1Q9NV70 894 aa15.35■□□□□ 0.05
LDLRAD4-203ENST00000399848 CCDC174Q6PII3 467 aa15.35■□□□□ 0.05
LDLRAD4-203ENST00000399848 KIF4AO95239 1232 aa15.35■□□□□ 0.05
LDLRAD4-203ENST00000399848 PDE4BQ07343 736 aa15.35■□□□□ 0.05
LDLRAD4-203ENST00000399848 CCDC85AQ96PX6 553 aaPredicted RBP15.35■□□□□ 0.05
LDLRAD4-203ENST00000399848 GRIN2BQ13224 1484 aa15.35■□□□□ 0.05
LDLRAD4-203ENST00000399848 GNG11P61952 73 aa15.35■□□□□ 0.05
LDLRAD4-203ENST00000399848 TAF7Q15545 349 aaPredicted RBP15.34■□□□□ 0.05
LDLRAD4-203ENST00000399848 CHMP4BP1P59074 171 aa15.34■□□□□ 0.05
LDLRAD4-203ENST00000399848 PRC1O43663 620 aa15.34■□□□□ 0.05
LDLRAD4-203ENST00000399848 TTC14Q96N46 770 aa15.34■□□□□ 0.05
LDLRAD4-203ENST00000399848 TMOD3Q9NYL9 352 aa15.34■□□□□ 0.05
LDLRAD4-203ENST00000399848 GJB2P29033 226 aa15.34■□□□□ 0.05
LDLRAD4-203ENST00000399848 CCDC6Q16204 474 aa15.34■□□□□ 0.05
LDLRAD4-203ENST00000399848 BMP15O95972 392 aa15.34■□□□□ 0.05
LDLRAD4-203ENST00000399848 CYLC1P35663 651 aaPredicted RBP15.34■□□□□ 0.05
LDLRAD4-203ENST00000399848 RAB3IL1Q8TBN0 382 aa15.34■□□□□ 0.05
LDLRAD4-203ENST00000399848 CTAGE9A4FU28 777 aa15.33■□□□□ 0.04
LDLRAD4-203ENST00000399848 IARSP41252 1262 aaKnown RBP15.33■□□□□ 0.04
LDLRAD4-203ENST00000399848 PTPN23Q9H3S7 1636 aa15.33■□□□□ 0.04
LDLRAD4-203ENST00000399848 ST5P78524 1137 aa15.33■□□□□ 0.04
LDLRAD4-203ENST00000399848 MSL1Q68DK7 614 aa15.33■□□□□ 0.04
LDLRAD4-203ENST00000399848 CCT2P78371 535 aaKnown RBP15.33■□□□□ 0.04
LDLRAD4-203ENST00000399848 TMEM67Q5HYA8 995 aa15.33■□□□□ 0.04
LDLRAD4-203ENST00000399848 TMX1Q9H3N1 280 aa15.33■□□□□ 0.04
LDLRAD4-203ENST00000399848 TUBB4AP04350 444 aa15.33■□□□□ 0.04
LDLRAD4-203ENST00000399848 AFAP1Q8N556 730 aa15.33■□□□□ 0.04
LDLRAD4-203ENST00000399848 OPA1O60313 960 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 CCDC82Q8N4S0 544 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 MSH6P52701 1360 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 SPTY2D1Q68D10 685 aaPredicted RBP15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 BICDL1Q6ZP65 573 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 DDX46Q7L014 1031 aaKnown RBP15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 SYNCQ9H7C4 482 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 KIF14Q15058 1648 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 BIN1O00499 593 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 UBASH3AP57075 661 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 PUF60Q9UHX1 559 aaKnown RBP15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 SSFA2P28290 1259 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 ERMNQ8TAM6 284 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 METAP2P50579 478 aaKnown RBP eCLIP15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 TRIM47Q96LD4 638 aa15.32■□□□□ 0.04
LDLRAD4-203ENST00000399848 N4BP3O15049 544 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 SMARCA5O60264 1052 aaPredicted RBP15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 BAG3O95817 575 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 SRRTQ9BXP5 876 aaKnown RBP15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 ATP2A1O14983 1001 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 RARSP54136 660 aaKnown RBP15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 TBCAO75347 108 aaKnown RBP15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 MXRA7P84157 204 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 CCDC77Q9BR77 488 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 ARHGEF6Q15052 776 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 MFSD6Q6ZSS7 791 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 SSH1Q8WYL5 1049 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 IDEP14735 1019 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 PLCD3Q8N3E9 789 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 AKR1B10O60218 316 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
LDLRAD4-203ENST00000399848 ZWINTO95229 277 aa15.3■□□□□ 0.04
LDLRAD4-203ENST00000399848 SYKP43405 635 aa15.3■□□□□ 0.04
LDLRAD4-203ENST00000399848 KLHL40Q2TBA0 621 aa15.3■□□□□ 0.04
LDLRAD4-203ENST00000399848 KCNG4Q8TDN1 519 aa15.3■□□□□ 0.04
LDLRAD4-203ENST00000399848 MYD88Q99836 296 aa15.3■□□□□ 0.04
LDLRAD4-203ENST00000399848 NBPF7P0C2Y1 421 aaPredicted RBP15.3■□□□□ 0.04
LDLRAD4-203ENST00000399848 BMP2KLQ5H9B9 411 aa15.3■□□□□ 0.04
LDLRAD4-203ENST00000399848 SMC6Q96SB8 1091 aa15.3■□□□□ 0.04
LDLRAD4-203ENST00000399848 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
LDLRAD4-203ENST00000399848 SAMM50Q9Y512 469 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms