RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 MKRN1Q9UHC7 482 aaKnown RBP13.3□□□□□ -0.28
HLCS-202ENST00000399120 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.3□□□□□ -0.281e-7■□□□□ 11.2
HLCS-202ENST00000399120 N4BP3O15049 544 aa13.3□□□□□ -0.28
HLCS-202ENST00000399120 CYLC1P35663 651 aaPredicted RBP13.3□□□□□ -0.28
HLCS-202ENST00000399120 CABP5Q9NP86 173 aa13.3□□□□□ -0.28
HLCS-202ENST00000399120 PHACTR2O75167 634 aa13.3□□□□□ -0.28
HLCS-202ENST00000399120 ATRIPQ8WXE1 791 aa13.3□□□□□ -0.28
HLCS-202ENST00000399120 OPA1O60313 960 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 IARSP41252 1262 aaKnown RBP13.29□□□□□ -0.28
HLCS-202ENST00000399120 GSTA5Q7RTV2 222 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 TMOD3Q9NYL9 352 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 RTEL1-TNFRSF6BF6WH68 1400 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 TMEM67Q5HYA8 995 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 ISM2Q6H9L7 571 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 SPAG5Q96R06 1193 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 CCDC102BQ68D86 513 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 PANK2Q9BZ23 570 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 LRSAM1Q6UWE0 723 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 SMC1BQ8NDV3 1235 aa13.29□□□□□ -0.28
HLCS-202ENST00000399120 KRT13P13646 458 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 RRS1Q15050 365 aaKnown RBP13.28□□□□□ -0.28
HLCS-202ENST00000399120 ERMNQ8TAM6 284 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 ANKRD50Q9ULJ7 1429 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 DUSP27Q5VZP5 1158 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 CCDC129Q6ZRS4 1044 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 KIAA1524Q8TCG1 905 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 SRRTQ9BXP5 876 aaKnown RBP13.28□□□□□ -0.28
HLCS-202ENST00000399120 RSPH14Q9UHP6 348 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 USP16Q9Y5T5 823 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 CTAGE15A4D2H0 777 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 CTAGE8P0CG41 777 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 SNX16P57768 344 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 PDE4BQ07343 736 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 TTF1Q15361 905 aaPredicted RBP13.28□□□□□ -0.28
HLCS-202ENST00000399120 CTAGE6Q86UF2 777 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 CTAGE4Q8IX94 777 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 THEMISQ8N1K5 641 aaPredicted RBP13.28□□□□□ -0.28
HLCS-202ENST00000399120 SELENOSQ9BQE4 189 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 CCDC171Q6TFL3 1326 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 CUX1P39880 1505 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 FCHSD2O94868 740 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 MCM5P33992 734 aa13.28□□□□□ -0.28
HLCS-202ENST00000399120 CCDC8Q9H0W5 538 aaPredicted RBP13.28□□□□□ -0.28
HLCS-202ENST00000399120 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
HLCS-202ENST00000399120 TSPY2A6NKD2 308 aa13.27□□□□□ -0.28
HLCS-202ENST00000399120 PTCD1O75127 700 aaKnown RBP13.27□□□□□ -0.28
HLCS-202ENST00000399120 GJB2P29033 226 aa13.27□□□□□ -0.28
HLCS-202ENST00000399120 TFIP11Q9UBB9 837 aaKnown RBP13.27□□□□□ -0.28
HLCS-202ENST00000399120 ZHX1Q9UKY1 873 aaPredicted RBP13.27□□□□□ -0.28
HLCS-202ENST00000399120 CCDC121Q6ZUS5 278 aa13.27□□□□□ -0.28
HLCS-202ENST00000399120 MRVI1Q9Y6F6 885 aa13.27□□□□□ -0.28
HLCS-202ENST00000399120 SSFA2P28290 1259 aa13.27□□□□□ -0.29
HLCS-202ENST00000399120 PIP4K2BP78356 416 aa13.27□□□□□ -0.29
HLCS-202ENST00000399120 GMNNO75496 209 aa13.27□□□□□ -0.29
HLCS-202ENST00000399120 HLA-DOAP06340 250 aa13.27□□□□□ -0.29
HLCS-202ENST00000399120 ZNF165P49910 485 aa13.27□□□□□ -0.29
HLCS-202ENST00000399120 KRT222Q8N1A0 295 aa13.27□□□□□ -0.29
HLCS-202ENST00000399120 CTAGE1Q96RT6 745 aa13.27□□□□□ -0.29
HLCS-202ENST00000399120 ARFGAP3Q9NP61 516 aa13.27□□□□□ -0.29
HLCS-202ENST00000399120 WDR66Q8TBY9 1149 aa13.26□□□□□ -0.29
HLCS-202ENST00000399120 TXNDC16Q9P2K2 825 aa13.26□□□□□ -0.29
HLCS-202ENST00000399120 TRMT112Q9UI30 125 aaKnown RBP13.26□□□□□ -0.29
HLCS-202ENST00000399120 CLGNO14967 610 aa13.26□□□□□ -0.29
HLCS-202ENST00000399120 LDHCP07864 332 aa13.26□□□□□ -0.29
HLCS-202ENST00000399120 GJC1P36383 396 aa13.26□□□□□ -0.29
HLCS-202ENST00000399120 PRDM2Q13029 1718 aa13.26□□□□□ -0.29
HLCS-202ENST00000399120 METAP2P50579 478 aaKnown RBP eCLIP13.26□□□□□ -0.29
HLCS-202ENST00000399120 RRAGBQ5VZM2 374 aa13.26□□□□□ -0.29
HLCS-202ENST00000399120 RAD54L2Q9Y4B4 1467 aa13.26□□□□□ -0.29
HLCS-202ENST00000399120 BAG3O95817 575 aa13.26□□□□□ -0.29
HLCS-202ENST00000399120 SLC26A6Q9BXS9 759 aa13.26□□□□□ -0.29
HLCS-202ENST00000399120 EEF2P13639 858 aaKnown RBP13.25□□□□□ -0.29
HLCS-202ENST00000399120 UBASH3AP57075 661 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 UVSSAQ2YD98 709 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 ORC3Q9UBD5 711 aaPredicted RBP13.25□□□□□ -0.29
HLCS-202ENST00000399120 CAVIN2O95810 425 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 CCDC110Q8TBZ0 833 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 STIM2Q9P246 746 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 RPGRIP1LQ68CZ1 1315 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 MIS18AQ9NYP9 233 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
HLCS-202ENST00000399120 TMEM110-MUSTN1A8MSY1 372 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 C6orf229H3BNL8 230 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 TACC1O75410 805 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 CFAP157Q5JU67 520 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 LMBR1Q8WVP7 490 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 PRIMPOLQ96LW4 560 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
HLCS-202ENST00000399120 CWC25Q9NXE8 425 aaPredicted RBP13.25□□□□□ -0.29
HLCS-202ENST00000399120 MFSD6Q6ZSS7 791 aa13.24□□□□□ -0.29
HLCS-202ENST00000399120 KIF3CO14782 793 aa13.24□□□□□ -0.29
HLCS-202ENST00000399120 NBPF7P0C2Y1 421 aaPredicted RBP13.24□□□□□ -0.29
HLCS-202ENST00000399120 CCDC14Q49A88 953 aa13.24□□□□□ -0.29
HLCS-202ENST00000399120 MICALL1Q8N3F8 863 aa13.24□□□□□ -0.29
HLCS-202ENST00000399120 EVI5LQ96CN4 794 aa13.24□□□□□ -0.29
HLCS-202ENST00000399120 ALDH3A1P30838 453 aa13.24□□□□□ -0.29
HLCS-202ENST00000399120 ZC3H6P61129 1189 aaKnown RBP13.24□□□□□ -0.29
HLCS-202ENST00000399120 CEP57Q86XR8 500 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms