RNA–Protein interactions for RNA: ENST00000398977.2

MSANTD3-204, Transcript of Myb/SANT DNA binding domain containing 3, human

TSL 3

Gene MSANTD3, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSANTD3-204	ENST00000398977	IARS	P41252	1262 aa	Known RBP	32.9	■■■□□ 2.86
MSANTD3-204	ENST00000398977	SYNE4	Q8N205	404 aa		32.9	■■■□□ 2.86
MSANTD3-204	ENST00000398977	PARP10	Q53GL7	1025 aa		32.89	■■■□□ 2.86
MSANTD3-204	ENST00000398977	CC2D2B	Q6DHV5	1058 aa		32.89	■■■□□ 2.86
MSANTD3-204	ENST00000398977	PSMD1	Q99460	953 aa		32.89	■■■□□ 2.86
MSANTD3-204	ENST00000398977	ANXA1	P04083	346 aa		32.88	■■■□□ 2.85
MSANTD3-204	ENST00000398977	PPP1R42	Q7Z4L9	355 aa		32.88	■■■□□ 2.85
MSANTD3-204	ENST00000398977	NEUROD2	Q15784	382 aa		32.87	■■■□□ 2.85
MSANTD3-204	ENST00000398977	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.87	■■■□□ 2.85
MSANTD3-204	ENST00000398977	PCNT	O95613	3336 aa		32.87	■■■□□ 2.85
MSANTD3-204	ENST00000398977	WDR43	Q15061	677 aa	Known RBP eCLIP	32.86	■■■□□ 2.85
MSANTD3-204	ENST00000398977	CRAMP1	Q96RY5	1269 aa		32.86	■■■□□ 2.85
MSANTD3-204	ENST00000398977	FZD9	O00144	591 aa		32.85	■■■□□ 2.85
MSANTD3-204	ENST00000398977	C3orf67	Q6ZVT6	689 aa		32.85	■■■□□ 2.85
MSANTD3-204	ENST00000398977	RUNDC1	Q96C34	613 aa		32.85	■■■□□ 2.85
MSANTD3-204	ENST00000398977	RBM17	Q96I25	401 aa	Known RBP	32.85	■■■□□ 2.85
MSANTD3-204	ENST00000398977	LDHD	Q86WU2	507 aa		32.84	■■■□□ 2.85
MSANTD3-204	ENST00000398977	ANKRD36C	Q5JPF3	1778 aa		32.83	■■■□□ 2.85
MSANTD3-204	ENST00000398977	CHL1	O00533	1208 aa		32.83	■■■□□ 2.85
MSANTD3-204	ENST00000398977	NECTIN2	Q92692	538 aa		32.83	■■■□□ 2.85
MSANTD3-204	ENST00000398977	UTP14A	Q9BVJ6	771 aa	Known RBP	32.83	■■■□□ 2.85
MSANTD3-204	ENST00000398977	TRIM35	Q9UPQ4	493 aa		32.83	■■■□□ 2.85
MSANTD3-204	ENST00000398977	GRIPAP1	Q4V328	841 aa		32.82	■■■□□ 2.84
MSANTD3-204	ENST00000398977	PPEF1	O14829	653 aa	Predicted RBP	32.81	■■■□□ 2.84
MSANTD3-204	ENST00000398977	COPS6	Q7L5N1	327 aa		32.81	■■■□□ 2.84
MSANTD3-204	ENST00000398977	XAGE3	Q8WTP9	111 aa		32.81	■■■□□ 2.84
MSANTD3-204	ENST00000398977	JDP2	Q8WYK2	163 aa		32.81	■■■□□ 2.84
MSANTD3-204	ENST00000398977	HACL1	Q9UJ83	578 aa		32.81	■■■□□ 2.84
MSANTD3-204	ENST00000398977	COL4A5	P29400	1685 aa		32.81	■■■□□ 2.84
MSANTD3-204	ENST00000398977	RNF123	Q5XPI4	1314 aa		32.8	■■■□□ 2.84
MSANTD3-204	ENST00000398977	KRT24	Q2M2I5	525 aa		32.8	■■■□□ 2.84
MSANTD3-204	ENST00000398977	HSP90AB3P	Q58FF7	597 aa		32.8	■■■□□ 2.84
MSANTD3-204	ENST00000398977	SLC10A5	Q5PT55	438 aa		32.8	■■■□□ 2.84
MSANTD3-204	ENST00000398977	NLRP3	Q96P20	1036 aa		32.8	■■■□□ 2.84
MSANTD3-204	ENST00000398977	AIMP1	Q12904	312 aa	Known RBP	32.79	■■■□□ 2.84
MSANTD3-204	ENST00000398977	SLC51A	Q86UW1	340 aa		32.79	■■■□□ 2.84
MSANTD3-204	ENST00000398977	GPC2	Q8N158	579 aa		32.79	■■■□□ 2.84
MSANTD3-204	ENST00000398977	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.79	■■■□□ 2.84
MSANTD3-204	ENST00000398977	CREBZF	Q9NS37	354 aa		32.79	■■■□□ 2.84
MSANTD3-204	ENST00000398977	ADAMTS8	Q9UP79	889 aa		32.79	■■■□□ 2.84
MSANTD3-204	ENST00000398977	LAS1L	Q9Y4W2	734 aa	Known RBP	32.78	■■■□□ 2.84
MSANTD3-204	ENST00000398977	ADAMTSL1	Q8N6G6	1762 aa		32.77	■■■□□ 2.84
MSANTD3-204	ENST00000398977	PASK	Q96RG2	1323 aa		32.77	■■■□□ 2.84
MSANTD3-204	ENST00000398977	EPHX2	P34913	555 aa		32.76	■■■□□ 2.83
MSANTD3-204	ENST00000398977	EAPP	Q56P03	285 aa	Predicted RBP	32.76	■■■□□ 2.83
MSANTD3-204	ENST00000398977	NLRP10	Q86W26	655 aa		32.76	■■■□□ 2.83
MSANTD3-204	ENST00000398977	TCERG1	O14776	1098 aa	Known RBP	32.75	■■■□□ 2.83
MSANTD3-204	ENST00000398977	LAMB2	P55268	1798 aa		32.74	■■■□□ 2.83
MSANTD3-204	ENST00000398977	EIF6	P56537	245 aa	Known RBP	32.74	■■■□□ 2.83
MSANTD3-204	ENST00000398977	TCIRG1	Q13488	830 aa		32.74	■■■□□ 2.83
MSANTD3-204	ENST00000398977	LARGE2	Q8N3Y3	721 aa		32.74	■■■□□ 2.83
MSANTD3-204	ENST00000398977	CHPF2	Q9P2E5	772 aa		32.74	■■■□□ 2.83
MSANTD3-204	ENST00000398977	ABCC4	O15439	1325 aa		32.74	■■■□□ 2.83
MSANTD3-204	ENST00000398977	HOXB7	P09629	217 aa		32.73	■■■□□ 2.83
MSANTD3-204	ENST00000398977	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.73	■■■□□ 2.83
MSANTD3-204	ENST00000398977	ATP6V0A2	Q9Y487	856 aa		32.73	■■■□□ 2.83
MSANTD3-204	ENST00000398977	HDGFL1	Q5TGJ6	251 aa		32.72	■■■□□ 2.83
MSANTD3-204	ENST00000398977	PNMA8A	Q86V59	439 aa	Predicted RBP	32.72	■■■□□ 2.83
MSANTD3-204	ENST00000398977	TMX4	Q9H1E5	349 aa	Predicted RBP	32.71	■■■□□ 2.83
MSANTD3-204	ENST00000398977	CLEC11A	Q9Y240	323 aa		32.71	■■■□□ 2.83
MSANTD3-204	ENST00000398977	ITGBL1	O95965	494 aa	Predicted RBP	32.7	■■■□□ 2.83
MSANTD3-204	ENST00000398977	HSPA1A	P0DMV8	641 aa	Known RBP	32.7	■■■□□ 2.83
MSANTD3-204	ENST00000398977	HSPA1B	P0DMV9	641 aa	Known RBP	32.7	■■■□□ 2.83
MSANTD3-204	ENST00000398977	HCLS1	P14317	486 aa	Predicted RBP	32.7	■■■□□ 2.83
MSANTD3-204	ENST00000398977	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.7	■■■□□ 2.83
MSANTD3-204	ENST00000398977	CFAP44	Q96MT7	982 aa		32.7	■■■□□ 2.83
MSANTD3-204	ENST00000398977	TRMT112	Q9UI30	125 aa	Known RBP	32.7	■■■□□ 2.83
MSANTD3-204	ENST00000398977	GJA3	Q9Y6H8	435 aa		32.7	■■■□□ 2.83
MSANTD3-204	ENST00000398977	MKRN1	Q9UHC7	482 aa	Known RBP	32.69	■■■□□ 2.82
MSANTD3-204	ENST00000398977	SH3TC1	Q8TE82	1336 aa		32.69	■■■□□ 2.82
MSANTD3-204	ENST00000398977	NIM1K	Q8IY84	436 aa		32.68	■■■□□ 2.82
MSANTD3-204	ENST00000398977	PPIP5K2	O43314	1243 aa		32.67	■■■□□ 2.82
MSANTD3-204	ENST00000398977	PLBD2	Q8NHP8	589 aa		32.67	■■■□□ 2.82
MSANTD3-204	ENST00000398977	DBF4	Q9UBU7	674 aa	Predicted RBP	32.67	■■■□□ 2.82
MSANTD3-204	ENST00000398977	LTBP1	Q14766	1721 aa		32.67	■■■□□ 2.82
MSANTD3-204	ENST00000398977	BBOX1	O75936	387 aa		32.66	■■■□□ 2.82
MSANTD3-204	ENST00000398977	CNTNAP1	P78357	1384 aa		32.66	■■■□□ 2.82
MSANTD3-204	ENST00000398977	LMOD1	P29536	600 aa	Predicted RBP	32.65	■■■□□ 2.82
MSANTD3-204	ENST00000398977	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.65	■■■□□ 2.82
MSANTD3-204	ENST00000398977	VPS33B	Q9H267	617 aa		32.65	■■■□□ 2.82
MSANTD3-204	ENST00000398977	TMEM88B	A6NKF7	163 aa		32.64	■■■□□ 2.82
MSANTD3-204	ENST00000398977	SCNN1D	P51172	638 aa		32.64	■■■□□ 2.82
MSANTD3-204	ENST00000398977	AOC3	Q16853	763 aa		32.64	■■■□□ 2.82
MSANTD3-204	ENST00000398977	DUSP27	Q5VZP5	1158 aa		32.64	■■■□□ 2.82
MSANTD3-204	ENST00000398977	MAP1S	Q66K74	1059 aa	Predicted RBP	32.64	■■■□□ 2.82
MSANTD3-204	ENST00000398977	ANKRD13D	Q6ZTN6	518 aa		32.64	■■■□□ 2.82
MSANTD3-204	ENST00000398977	DDX46	Q7L014	1031 aa	Known RBP	32.64	■■■□□ 2.82
MSANTD3-204	ENST00000398977	SUPT20H	Q8NEM7	779 aa		32.64	■■■□□ 2.82
MSANTD3-204	ENST00000398977	MBIP	Q9NS73	344 aa		32.64	■■■□□ 2.82
MSANTD3-204	ENST00000398977	SP8	Q8IXZ3	490 aa		32.63	■■■□□ 2.81
MSANTD3-204	ENST00000398977	CNTROB	Q8N137	903 aa		32.63	■■■□□ 2.81
MSANTD3-204	ENST00000398977	GRAP	Q13588	217 aa		32.62	■■■□□ 2.81
MSANTD3-204	ENST00000398977	GRAPL	Q8TC17	118 aa	Predicted RBP	32.62	■■■□□ 2.81
MSANTD3-204	ENST00000398977	HYPK	Q9NX55	129 aa		32.62	■■■□□ 2.81
MSANTD3-204	ENST00000398977	DDX60	Q8IY21	1712 aa	Known RBP	32.61	■■■□□ 2.81
MSANTD3-204	ENST00000398977	ZNF853	P0CG23	659 aa		32.61	■■■□□ 2.81
MSANTD3-204	ENST00000398977	DPP8	Q6V1X1	898 aa	Predicted RBP	32.61	■■■□□ 2.81
MSANTD3-204	ENST00000398977	ZNF428	Q96B54	188 aa		32.61	■■■□□ 2.81
MSANTD3-204	ENST00000398977	ISCA1	Q9BUE6	129 aa		32.61	■■■□□ 2.81
MSANTD3-204	ENST00000398977	EPS15	P42566	896 aa		32.6	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms