RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CPDO75976 1380 aa30.67■■■□□ 2.5
COL13A1-203ENST00000398969 ABCC6O95255 1503 aa30.66■■■□□ 2.5
COL13A1-203ENST00000398969 UBE2HP62256 183 aa30.66■■■□□ 2.5
COL13A1-203ENST00000398969 CCDC83Q8IWF9 413 aa30.66■■■□□ 2.5
COL13A1-203ENST00000398969 FAM184AQ8NB25 1140 aa30.66■■■□□ 2.5
COL13A1-203ENST00000398969 ATP6V1DQ9Y5K8 247 aa30.66■■■□□ 2.5
COL13A1-203ENST00000398969 LINS1Q8NG48 757 aa30.66■■■□□ 2.5
COL13A1-203ENST00000398969 CYP46A1Q9Y6A2 500 aa30.66■■■□□ 2.5
COL13A1-203ENST00000398969 NECTIN1Q15223 517 aa30.65■■■□□ 2.5
COL13A1-203ENST00000398969 KAZALD1Q96I82 304 aa30.65■■■□□ 2.5
COL13A1-203ENST00000398969 SUCLG2Q96I99 432 aa30.65■■■□□ 2.5
COL13A1-203ENST00000398969 ZSCAN31Q96LW9 406 aaPredicted RBP30.65■■■□□ 2.5
COL13A1-203ENST00000398969 UTYO14607 1347 aa30.65■■■□□ 2.5
COL13A1-203ENST00000398969 CCDC171Q6TFL3 1326 aa30.65■■■□□ 2.5
COL13A1-203ENST00000398969 GRM8O00222 908 aa30.64■■■□□ 2.5
COL13A1-203ENST00000398969 GJB2P29033 226 aa30.64■■■□□ 2.5
COL13A1-203ENST00000398969 SIPA1L3O60292 1781 aaPredicted RBP30.64■■■□□ 2.5
COL13A1-203ENST00000398969 RAPGEF4Q8WZA2 1011 aa30.64■■■□□ 2.5
COL13A1-203ENST00000398969 SH2B1Q9NRF2 756 aaPredicted RBP30.64■■■□□ 2.5
COL13A1-203ENST00000398969 SASH1O94885 1247 aa30.63■■■□□ 2.49
COL13A1-203ENST00000398969 UVSSAQ2YD98 709 aa30.63■■■□□ 2.49
COL13A1-203ENST00000398969 CSB-PGBD3P0DP91 1061 aa30.63■■■□□ 2.49
COL13A1-203ENST00000398969 LETM1O95202 739 aaPredicted RBP30.62■■■□□ 2.49
COL13A1-203ENST00000398969 BICC1Q9H694 974 aaKnown RBP30.62■■■□□ 2.49
COL13A1-203ENST00000398969 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.62■■■□□ 2.49
COL13A1-203ENST00000398969 FIBPO43427 364 aa30.62■■■□□ 2.49
COL13A1-203ENST00000398969 MTMR6Q9Y217 621 aa30.62■■■□□ 2.49
COL13A1-203ENST00000398969 R3HCC1Q9Y3T6 440 aaKnown RBP30.62■■■□□ 2.49
COL13A1-203ENST00000398969 ST3GAL1Q11201 340 aa30.61■■■□□ 2.49
COL13A1-203ENST00000398969 EAF2Q96CJ1 260 aaPredicted RBP30.61■■■□□ 2.49
COL13A1-203ENST00000398969 RBM8AQ9Y5S9 174 aaKnown RBP30.61■■■□□ 2.49
COL13A1-203ENST00000398969 ZKSCAN1P17029 563 aaPredicted RBP30.61■■■□□ 2.49
COL13A1-203ENST00000398969 CSPP1Q1MSJ5 1256 aa30.61■■■□□ 2.49
COL13A1-203ENST00000398969 DDX21Q9NR30 783 aaKnown RBP eCLIP30.61■■■□□ 2.49
COL13A1-203ENST00000398969 DDX58O95786 925 aaKnown RBP30.6■■■□□ 2.49
COL13A1-203ENST00000398969 FAM227BQ96M60 508 aa30.6■■■□□ 2.49
COL13A1-203ENST00000398969 HIP1O00291 1037 aa30.59■■■□□ 2.49
COL13A1-203ENST00000398969 PTMAP06454 111 aaKnown RBP30.59■■■□□ 2.49
COL13A1-203ENST00000398969 G3BP1Q13283 466 aaKnown RBP eCLIP30.59■■■□□ 2.49
COL13A1-203ENST00000398969 CREB3L3Q68CJ9 461 aa30.59■■■□□ 2.49
COL13A1-203ENST00000398969 NMIQ13287 307 aaPredicted RBP30.59■■■□□ 2.49
COL13A1-203ENST00000398969 ME3Q16798 604 aa30.59■■■□□ 2.49
COL13A1-203ENST00000398969 MAP4K1Q92918 833 aa30.59■■■□□ 2.49
COL13A1-203ENST00000398969 TATP17735 454 aaPredicted RBP30.58■■■□□ 2.49
COL13A1-203ENST00000398969 SNRKQ9NRH2 765 aa30.58■■■□□ 2.49
COL13A1-203ENST00000398969 ADAMTS7Q9UKP4 1686 aa30.58■■■□□ 2.49
COL13A1-203ENST00000398969 AIMP1Q12904 312 aaKnown RBP30.58■■■□□ 2.49
COL13A1-203ENST00000398969 PDIA6Q15084 440 aa30.58■■■□□ 2.49
COL13A1-203ENST00000398969 TPRNQ4KMQ1 711 aa30.58■■■□□ 2.49
COL13A1-203ENST00000398969 CCDC8Q9H0W5 538 aaPredicted RBP30.58■■■□□ 2.49
COL13A1-203ENST00000398969 DDX54Q8TDD1 881 aaKnown RBP30.57■■■□□ 2.48
COL13A1-203ENST00000398969 DTNBO60941 627 aa30.57■■■□□ 2.48
COL13A1-203ENST00000398969 DNM1Q05193 864 aaKnown RBP30.57■■■□□ 2.48
COL13A1-203ENST00000398969 TLR7Q9NYK1 1049 aaKnown RBP30.56■■■□□ 2.48
COL13A1-203ENST00000398969 MEGF6O75095 1541 aa30.56■■■□□ 2.48
COL13A1-203ENST00000398969 KCNJ4P48050 445 aa30.56■■■□□ 2.48
COL13A1-203ENST00000398969 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.56■■■□□ 2.48
COL13A1-203ENST00000398969 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.56■■■□□ 2.48
COL13A1-203ENST00000398969 IGKV5-2P06315 115 aa30.55■■■□□ 2.48
COL13A1-203ENST00000398969 USP25Q9UHP3 1055 aa30.55■■■□□ 2.48
COL13A1-203ENST00000398969 TPCN1Q9ULQ1 816 aa30.55■■■□□ 2.48
COL13A1-203ENST00000398969 HCLS1P14317 486 aaPredicted RBP30.54■■■□□ 2.48
COL13A1-203ENST00000398969 SLC27A2O14975 620 aa30.54■■■□□ 2.48
COL13A1-203ENST00000398969 NECAB1Q8N987 351 aa30.54■■■□□ 2.48
COL13A1-203ENST00000398969 A0A0D9SFI3 127 aa30.53■■■□□ 2.48
COL13A1-203ENST00000398969 KLHL34Q8N239 644 aa30.53■■■□□ 2.48
COL13A1-203ENST00000398969 PRDM11Q9NQV5 511 aa30.53■■■□□ 2.48
COL13A1-203ENST00000398969 VPS37CA5D8V6 355 aaPredicted RBP30.52■■■□□ 2.48
COL13A1-203ENST00000398969 PSMA5P28066 241 aa30.52■■■□□ 2.48
COL13A1-203ENST00000398969 SIL1Q9H173 461 aa30.52■■■□□ 2.48
COL13A1-203ENST00000398969 PLEKHG2Q9H7P9 1386 aa30.52■■■□□ 2.48
COL13A1-203ENST00000398969 RIC3Q7Z5B4 369 aa30.52■■■□□ 2.48
COL13A1-203ENST00000398969 FUCA2Q9BTY2 467 aa30.52■■■□□ 2.48
COL13A1-203ENST00000398969 BOLA2Q9H3K6 86 aa30.52■■■□□ 2.48
COL13A1-203ENST00000398969 PHKG2P15735 406 aa30.51■■■□□ 2.47
COL13A1-203ENST00000398969 FSD1Q9BTV5 496 aa30.51■■■□□ 2.47
COL13A1-203ENST00000398969 MRC1P22897 1456 aa30.51■■■□□ 2.47
COL13A1-203ENST00000398969 MED23Q9ULK4 1368 aa30.51■■■□□ 2.47
COL13A1-203ENST00000398969 KIAA2012Q0VF49 1180 aa30.5■■■□□ 2.47
COL13A1-203ENST00000398969 COL9A3Q14050 684 aaPredicted RBP30.5■■■□□ 2.47
COL13A1-203ENST00000398969 LARP1Q6PKG0 1096 aaKnown RBP30.5■■■□□ 2.47
COL13A1-203ENST00000398969 ADCY5O95622 1261 aa30.49■■■□□ 2.47
COL13A1-203ENST00000398969 C5P01031 1676 aa30.49■■■□□ 2.47
COL13A1-203ENST00000398969 NEURL1BA8MQ27 555 aa30.49■■■□□ 2.47
COL13A1-203ENST00000398969 GIMAP6Q6P9H5 292 aa30.49■■■□□ 2.47
COL13A1-203ENST00000398969 ZNF790Q6PG37 636 aa30.49■■■□□ 2.47
COL13A1-203ENST00000398969 KLHDC4Q8TBB5 520 aa30.49■■■□□ 2.47
COL13A1-203ENST00000398969 IFNL2Q8IZJ0 200 aa30.48■■■□□ 2.47
COL13A1-203ENST00000398969 NHSL1Q5SYE7 1610 aa30.48■■■□□ 2.47
COL13A1-203ENST00000398969 SLC39A6Q13433 755 aa30.48■■■□□ 2.47
COL13A1-203ENST00000398969 RNF20Q5VTR2 975 aa30.48■■■□□ 2.47
COL13A1-203ENST00000398969 KDM6AO15550 1401 aaPredicted RBP30.47■■■□□ 2.47
COL13A1-203ENST00000398969 NEXNQ0ZGT2 675 aa30.47■■■□□ 2.47
COL13A1-203ENST00000398969 LARP1BQ659C4 914 aaKnown RBP30.47■■■□□ 2.47
COL13A1-203ENST00000398969 GCKRQ14397 625 aa30.47■■■□□ 2.47
COL13A1-203ENST00000398969 GLIPR1L2Q4G1C9 344 aa30.47■■■□□ 2.47
COL13A1-203ENST00000398969 BLOC1S2Q6QNY1 142 aa30.47■■■□□ 2.47
COL13A1-203ENST00000398969 JCADQ9P266 1359 aa30.46■■■□□ 2.47
COL13A1-203ENST00000398969 SCN11AQ9UI33 1791 aa30.46■■■□□ 2.47
COL13A1-203ENST00000398969 UQCRHLA0A096LP55 91 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms