RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 NGDNQ8NEJ9 315 aaKnown RBP13□□□□□ -0.33
MSL3-207ENST00000398527 TSPYL1Q9H0U9 437 aa13□□□□□ -0.33
MSL3-207ENST00000398527 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
MSL3-207ENST00000398527 MAMSTRQ6ZN01 415 aa12.99□□□□□ -0.33
MSL3-207ENST00000398527 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
MSL3-207ENST00000398527 BCL9O00512 1426 aa12.99□□□□□ -0.33
MSL3-207ENST00000398527 COQ9O75208 318 aa12.99□□□□□ -0.33
MSL3-207ENST00000398527 CCT2P78371 535 aaKnown RBP12.99□□□□□ -0.33
MSL3-207ENST00000398527 EXOSC9Q06265 439 aaKnown RBP12.99□□□□□ -0.33
MSL3-207ENST00000398527 MICAL1Q8TDZ2 1067 aa12.99□□□□□ -0.33
MSL3-207ENST00000398527 ARHGAP45Q92619 1136 aa12.99□□□□□ -0.33
MSL3-207ENST00000398527 NCAPGQ9BPX3 1015 aa12.99□□□□□ -0.33
MSL3-207ENST00000398527 NBPF3Q9H094 633 aa12.99□□□□□ -0.33
MSL3-207ENST00000398527 SMC4Q9NTJ3 1288 aa12.99□□□□□ -0.33
MSL3-207ENST00000398527 ATP10DQ9P241 1426 aa12.98□□□□□ -0.33
MSL3-207ENST00000398527 CPDO75976 1380 aa12.98□□□□□ -0.33
MSL3-207ENST00000398527 ESPNB1AK53 854 aa12.98□□□□□ -0.33
MSL3-207ENST00000398527 ZFYVE27Q5T4F4 411 aa12.98□□□□□ -0.33
MSL3-207ENST00000398527 SMC5Q8IY18 1101 aa12.98□□□□□ -0.33
MSL3-207ENST00000398527 HELBQ8NG08 1087 aaPredicted RBP12.98□□□□□ -0.33
MSL3-207ENST00000398527 FAM13BQ9NYF5 915 aa12.98□□□□□ -0.33
MSL3-207ENST00000398527 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
MSL3-207ENST00000398527 ZC3H4Q9UPT8 1303 aaKnown RBP12.98□□□□□ -0.33
MSL3-207ENST00000398527 TRIM27P14373 513 aa12.97□□□□□ -0.33
MSL3-207ENST00000398527 RIPK4P57078 832 aa12.97□□□□□ -0.33
MSL3-207ENST00000398527 NFKBIBQ15653 356 aa12.97□□□□□ -0.33
MSL3-207ENST00000398527 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
MSL3-207ENST00000398527 UPF2Q9HAU5 1272 aaKnown RBP12.97□□□□□ -0.33
MSL3-207ENST00000398527 COL5A2P05997 1499 aaPredicted RBP12.97□□□□□ -0.33
MSL3-207ENST00000398527 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
MSL3-207ENST00000398527 MAP4K4O95819 1239 aaPredicted RBP12.97□□□□□ -0.33
MSL3-207ENST00000398527 ZNF853P0CG23 659 aa12.97□□□□□ -0.33
MSL3-207ENST00000398527 PAX3P23760 479 aa12.97□□□□□ -0.33
MSL3-207ENST00000398527 TBC1D32Q96NH3 1257 aa12.97□□□□□ -0.33
MSL3-207ENST00000398527 TRIM34Q9BYJ4 488 aa12.97□□□□□ -0.33
MSL3-207ENST00000398527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.96□□□□□ -0.33
MSL3-207ENST00000398527 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.33
MSL3-207ENST00000398527 CRB1P82279 1406 aa12.96□□□□□ -0.33
MSL3-207ENST00000398527 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
MSL3-207ENST00000398527 TERF1P54274 439 aa12.96□□□□□ -0.34
MSL3-207ENST00000398527 NFE2L2Q16236 605 aa12.96□□□□□ -0.34
MSL3-207ENST00000398527 DDB1Q16531 1140 aa12.96□□□□□ -0.34
MSL3-207ENST00000398527 CEP126Q9P2H0 1117 aa12.96□□□□□ -0.34
MSL3-207ENST00000398527 PAPPAQ13219 1627 aa12.96□□□□□ -0.34
MSL3-207ENST00000398527 PLEKHG3A1L390 1219 aa12.95□□□□□ -0.34
MSL3-207ENST00000398527 NEXNQ0ZGT2 675 aa12.95□□□□□ -0.34
MSL3-207ENST00000398527 PUS10Q3MIT2 529 aaKnown RBP12.95□□□□□ -0.34
MSL3-207ENST00000398527 ZBTB40Q9NUA8 1239 aa12.95□□□□□ -0.34
MSL3-207ENST00000398527 KCNJ4P48050 445 aa12.95□□□□□ -0.34
MSL3-207ENST00000398527 HDGFL1Q5TGJ6 251 aa12.95□□□□□ -0.34
MSL3-207ENST00000398527 NME9Q86XW9 330 aa12.95□□□□□ -0.34
MSL3-207ENST00000398527 CACTIN-AS1Q8N1I8 211 aa12.95□□□□□ -0.34
MSL3-207ENST00000398527 COG3Q96JB2 828 aa12.95□□□□□ -0.34
MSL3-207ENST00000398527 IFT57Q9NWB7 429 aa12.95□□□□□ -0.34
MSL3-207ENST00000398527 COL24A1Q17RW2 1714 aa12.94□□□□□ -0.34
MSL3-207ENST00000398527 ANKRD62A6NC57 917 aa12.94□□□□□ -0.34
MSL3-207ENST00000398527 WDR78Q5VTH9 848 aa12.94□□□□□ -0.34
MSL3-207ENST00000398527 NUTM2GQ5VZR2 741 aa12.94□□□□□ -0.34
MSL3-207ENST00000398527 TSR2Q969E8 191 aaKnown RBP12.94□□□□□ -0.34
MSL3-207ENST00000398527 TNNQ9UQP3 1299 aa12.94□□□□□ -0.34
MSL3-207ENST00000398527 WNK3Q9BYP7 1800 aa12.94□□□□□ -0.34
MSL3-207ENST00000398527 GRIN3BO60391 1043 aa12.94□□□□□ -0.34
MSL3-207ENST00000398527 MARCH10Q8NA82 808 aaPredicted RBP12.94□□□□□ -0.34
MSL3-207ENST00000398527 ZRANB2O95218 330 aaKnown RBP eCLIP12.93□□□□□ -0.34
MSL3-207ENST00000398527 PAX7P23759 505 aa12.93□□□□□ -0.34
MSL3-207ENST00000398527 IL13P35225 146 aa12.93□□□□□ -0.34
MSL3-207ENST00000398527 FOSBP53539 338 aa12.93□□□□□ -0.34
MSL3-207ENST00000398527 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
MSL3-207ENST00000398527 EXOC5O00471 708 aa12.93□□□□□ -0.34
MSL3-207ENST00000398527 GNAI1P63096 354 aa12.93□□□□□ -0.34
MSL3-207ENST00000398527 BCL2L13Q9BXK5 485 aa12.93□□□□□ -0.34
MSL3-207ENST00000398527 DONSONQ9NYP3 566 aa12.93□□□□□ -0.34
MSL3-207ENST00000398527 NOB1Q9ULX3 412 aaKnown RBP12.92□□□□□ -0.34
MSL3-207ENST00000398527 DLG5Q8TDM6 1919 aa12.92□□□□□ -0.34
MSL3-207ENST00000398527 PRKAR2BP31323 418 aa12.91□□□□□ -0.34
MSL3-207ENST00000398527 SF3A1Q15459 793 aaKnown RBP12.91□□□□□ -0.34
MSL3-207ENST00000398527 L1TD1Q5T7N2 865 aaKnown RBP12.91□□□□□ -0.34
MSL3-207ENST00000398527 CLEC4GQ6UXB4 293 aa12.91□□□□□ -0.34
MSL3-207ENST00000398527 USP6P35125 1406 aa12.91□□□□□ -0.34
MSL3-207ENST00000398527 YBX3P16989 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
MSL3-207ENST00000398527 ZNF662Q6ZS27 426 aa12.91□□□□□ -0.34
MSL3-207ENST00000398527 NLGN2Q8NFZ4 835 aa12.91□□□□□ -0.34
MSL3-207ENST00000398527 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
MSL3-207ENST00000398527 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
MSL3-207ENST00000398527 TTC21BQ7Z4L5 1316 aa12.91□□□□□ -0.34
MSL3-207ENST00000398527 ADCY9O60503 1353 aa12.91□□□□□ -0.34
MSL3-207ENST00000398527 KLHL33A6NCF5 533 aa12.9□□□□□ -0.34
MSL3-207ENST00000398527 KIF1CO43896 1103 aaKnown RBP12.9□□□□□ -0.34
MSL3-207ENST00000398527 SEC24BO95487 1268 aa12.9□□□□□ -0.34
MSL3-207ENST00000398527 SUDS3Q9H7L9 328 aaPredicted RBP12.9□□□□□ -0.34
MSL3-207ENST00000398527 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
MSL3-207ENST00000398527 EMILIN1Q9Y6C2 1016 aa12.9□□□□□ -0.34
MSL3-207ENST00000398527 CAPN15O75808 1086 aa12.9□□□□□ -0.34
MSL3-207ENST00000398527 MCCD1P59942 119 aaPredicted RBP12.9□□□□□ -0.34
MSL3-207ENST00000398527 ITPRIPQ8IWB1 547 aa12.9□□□□□ -0.34
MSL3-207ENST00000398527 TMEM57Q8N5G2 664 aa12.9□□□□□ -0.34
MSL3-207ENST00000398527 ACEP12821 1306 aa12.9□□□□□ -0.34
MSL3-207ENST00000398527 QSER1Q2KHR3 1735 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 UNCXA6NJT0 531 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 RAB11FIP3O75154 756 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms