RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CLEC4GQ6UXB4 293 aa34.33■■■■□ 3.09
CPNE1-203ENST00000397442 PPP1R42Q7Z4L9 355 aa34.33■■■■□ 3.09
CPNE1-203ENST00000397442 SSH3Q8TE77 659 aa34.33■■■■□ 3.09
CPNE1-203ENST00000397442 BICC1Q9H694 974 aaKnown RBP34.33■■■■□ 3.09
CPNE1-203ENST00000397442 EPHA10Q5JZY3 1008 aa34.32■■■■□ 3.08
CPNE1-203ENST00000397442 GCC1Q96CN9 775 aa34.32■■■■□ 3.08
CPNE1-203ENST00000397442 HMGB2P26583 209 aaKnown RBP34.31■■■■□ 3.08
CPNE1-203ENST00000397442 POLA2Q14181 598 aa34.31■■■■□ 3.08
CPNE1-203ENST00000397442 BCL2L12Q9HB09 334 aa34.31■■■■□ 3.08
CPNE1-203ENST00000397442 PCCAP05165 728 aaPredicted RBP34.3■■■■□ 3.08
CPNE1-203ENST00000397442 SRP68Q9UHB9 627 aaKnown RBP34.3■■■■□ 3.08
CPNE1-203ENST00000397442 PDZRN3Q9UPQ7 1066 aa34.3■■■■□ 3.08
CPNE1-203ENST00000397442 ZNF652Q9Y2D9 606 aa34.3■■■■□ 3.08
CPNE1-203ENST00000397442 ADRA2BP18089 450 aa34.29■■■■□ 3.08
CPNE1-203ENST00000397442 RTL5Q5HYW3 569 aaPredicted RBP34.29■■■■□ 3.08
CPNE1-203ENST00000397442 TRAPPC3LQ5T215 181 aa34.29■■■■□ 3.08
CPNE1-203ENST00000397442 ZBTB38Q8NAP3 1195 aaPredicted RBP34.29■■■■□ 3.08
CPNE1-203ENST00000397442 PHF14O94880 888 aa34.28■■■■□ 3.08
CPNE1-203ENST00000397442 USPL1Q5W0Q7 1092 aa34.28■■■■□ 3.08
CPNE1-203ENST00000397442 SRGAP3O43295 1099 aa34.28■■■■□ 3.08
CPNE1-203ENST00000397442 CAMKK2Q96RR4 588 aa34.28■■■■□ 3.08
CPNE1-203ENST00000397442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.27■■■■□ 3.08
CPNE1-203ENST00000397442 RABL6Q3YEC7 729 aaPredicted RBP34.27■■■■□ 3.08
CPNE1-203ENST00000397442 USP42Q9H9J4 1324 aaKnown RBP34.26■■■■□ 3.08
CPNE1-203ENST00000397442 AKT1S1Q96B36 256 aa34.26■■■■□ 3.08
CPNE1-203ENST00000397442 FAM89AQ96GI7 184 aa34.26■■■■□ 3.08
CPNE1-203ENST00000397442 ZPR1O75312 459 aa34.25■■■■□ 3.07
CPNE1-203ENST00000397442 SSFA2P28290 1259 aa34.25■■■■□ 3.07
CPNE1-203ENST00000397442 FOXO4P98177 505 aa34.25■■■■□ 3.07
CPNE1-203ENST00000397442 ZNF827Q17R98 1081 aa34.25■■■■□ 3.07
CPNE1-203ENST00000397442 NIP7Q9Y221 180 aaKnown RBP eCLIP34.25■■■■□ 3.07
CPNE1-203ENST00000397442 NUCB1Q02818 461 aa34.25■■■■□ 3.07
CPNE1-203ENST00000397442 RFC4P35249 363 aa34.24■■■■□ 3.07
CPNE1-203ENST00000397442 EN1Q05925 392 aaPredicted RBP34.24■■■■□ 3.07
CPNE1-203ENST00000397442 PARP10Q53GL7 1025 aa34.24■■■■□ 3.07
CPNE1-203ENST00000397442 SUSD4Q5VX71 490 aa34.24■■■■□ 3.07
CPNE1-203ENST00000397442 CDHR2Q9BYE9 1310 aa34.24■■■■□ 3.07
CPNE1-203ENST00000397442 EZH2Q15910 746 aaKnown RBP34.23■■■■□ 3.07
CPNE1-203ENST00000397442 SYNE4Q8N205 404 aa34.23■■■■□ 3.07
CPNE1-203ENST00000397442 TRMT112Q9UI30 125 aaKnown RBP34.22■■■■□ 3.07
CPNE1-203ENST00000397442 TUBGCP6Q96RT7 1819 aa34.22■■■■□ 3.07
CPNE1-203ENST00000397442 TBC1D9BQ66K14 1250 aa34.21■■■■□ 3.07
CPNE1-203ENST00000397442 PLA2G12BQ9BX93 195 aa34.21■■■■□ 3.07
CPNE1-203ENST00000397442 EXOC6BQ9Y2D4 811 aa34.2■■■■□ 3.07
CPNE1-203ENST00000397442 ANKRD45Q5TZF3 282 aa34.19■■■■□ 3.06
CPNE1-203ENST00000397442 CHD1LQ86WJ1 897 aa34.19■■■■□ 3.06
CPNE1-203ENST00000397442 UTP14AQ9BVJ6 771 aaKnown RBP34.19■■■■□ 3.06
CPNE1-203ENST00000397442 COL24A1Q17RW2 1714 aa34.18■■■■□ 3.06
CPNE1-203ENST00000397442 NTSR2O95665 410 aa34.18■■■■□ 3.06
CPNE1-203ENST00000397442 LMBR1LQ6UX01 489 aa34.18■■■■□ 3.06
CPNE1-203ENST00000397442 SF3B2Q13435 895 aaKnown RBP34.16■■■■□ 3.06
CPNE1-203ENST00000397442 TFCP2L1Q9NZI6 479 aa34.16■■■■□ 3.06
CPNE1-203ENST00000397442 PDE4AP27815 886 aa34.15■■■■□ 3.06
CPNE1-203ENST00000397442 NOP58Q9Y2X3 529 aaKnown RBP34.15■■■■□ 3.06
CPNE1-203ENST00000397442 SH3TC1Q8TE82 1336 aa34.15■■■■□ 3.06
CPNE1-203ENST00000397442 FAM177BA6PVY3 158 aa34.15■■■■□ 3.06
CPNE1-203ENST00000397442 IRS4O14654 1257 aaPredicted RBP34.15■■■■□ 3.06
CPNE1-203ENST00000397442 BAG6P46379 1132 aa34.15■■■■□ 3.06
CPNE1-203ENST00000397442 RFX5P48382 616 aaPredicted RBP34.15■■■■□ 3.06
CPNE1-203ENST00000397442 LNPKQ9C0E8 428 aa34.15■■■■□ 3.06
CPNE1-203ENST00000397442 SURF6O75683 361 aaKnown RBP34.14■■■■□ 3.06
CPNE1-203ENST00000397442 RGS3P49796 1198 aa34.14■■■■□ 3.06
CPNE1-203ENST00000397442 BICDL1Q6ZP65 573 aa34.14■■■■□ 3.06
CPNE1-203ENST00000397442 DEFB132Q7Z7B7 95 aa34.14■■■■□ 3.06
CPNE1-203ENST00000397442 MYH3P11055 1940 aa34.14■■■■□ 3.06
CPNE1-203ENST00000397442 GYS1P13807 737 aa34.13■■■■□ 3.05
CPNE1-203ENST00000397442 PA2G4Q9UQ80 394 aaKnown RBP34.13■■■■□ 3.05
CPNE1-203ENST00000397442 DDX60Q8IY21 1712 aaKnown RBP34.12■■■■□ 3.05
CPNE1-203ENST00000397442 APBB1O00213 710 aa34.12■■■■□ 3.05
CPNE1-203ENST00000397442 CSF1RP07333 972 aa34.12■■■■□ 3.05
CPNE1-203ENST00000397442 SETDB2Q96T68 719 aa34.12■■■■□ 3.05
CPNE1-203ENST00000397442 LAMB2P55268 1798 aa34.11■■■■□ 3.05
CPNE1-203ENST00000397442 PELP1Q8IZL8 1130 aaKnown RBP34.11■■■■□ 3.05
CPNE1-203ENST00000397442 ANO8Q9HCE9 1232 aaPredicted RBP34.11■■■■□ 3.05
CPNE1-203ENST00000397442 PDE8AO60658 829 aa34.09■■■■□ 3.05
CPNE1-203ENST00000397442 COL23A1Q86Y22 540 aaPredicted RBP34.09■■■■□ 3.05
CPNE1-203ENST00000397442 NUTM1Q86Y26 1132 aa34.09■■■■□ 3.05
CPNE1-203ENST00000397442 KLHDC4Q8TBB5 520 aa34.09■■■■□ 3.05
CPNE1-203ENST00000397442 COPRSQ9NQ92 184 aa34.09■■■■□ 3.05
CPNE1-203ENST00000397442 SMARCA5O60264 1052 aaPredicted RBP34.09■■■■□ 3.05
CPNE1-203ENST00000397442 PTPN12Q05209 780 aaKnown RBP34.09■■■■□ 3.05
CPNE1-203ENST00000397442 RAB11FIP3O75154 756 aa34.08■■■■□ 3.05
CPNE1-203ENST00000397442 CTSWP56202 376 aa34.08■■■■□ 3.05
CPNE1-203ENST00000397442 NFIXQ14938 502 aa34.08■■■■□ 3.05
CPNE1-203ENST00000397442 CCDC125Q86Z20 511 aa34.08■■■■□ 3.05
CPNE1-203ENST00000397442 TTLL11Q8NHH1 800 aa34.08■■■■□ 3.05
CPNE1-203ENST00000397442 PNPLA7Q6ZV29 1317 aa34.07■■■■□ 3.05
CPNE1-203ENST00000397442 HCLS1P14317 486 aaPredicted RBP34.07■■■■□ 3.04
CPNE1-203ENST00000397442 LRRCC1Q9C099 1032 aa34.07■■■■□ 3.04
CPNE1-203ENST00000397442 CHMP3Q9Y3E7 222 aa34.07■■■■□ 3.04
CPNE1-203ENST00000397442 HSP90AB4PQ58FF6 505 aa34.06■■■■□ 3.04
CPNE1-203ENST00000397442 FLAD1Q8NFF5 587 aa34.06■■■■□ 3.04
CPNE1-203ENST00000397442 SLC15A2Q16348 729 aa34.05■■■■□ 3.04
CPNE1-203ENST00000397442 FAM161AQ3B820 660 aa34.05■■■■□ 3.04
CPNE1-203ENST00000397442 ERFEQ4G0M1 354 aa34.05■■■■□ 3.04
CPNE1-203ENST00000397442 CARMIL3Q8ND23 1372 aa34.04■■■■□ 3.04
CPNE1-203ENST00000397442 RHPN1Q8TCX5 695 aa34.04■■■■□ 3.04
CPNE1-203ENST00000397442 NYXQ9GZU5 481 aa34.04■■■■□ 3.04
CPNE1-203ENST00000397442 QSER1Q2KHR3 1735 aa34.03■■■■□ 3.04
CPNE1-203ENST00000397442 TM4SF1P30408 202 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms