RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 SUSD4Q5VX71 490 aa16.33■□□□□ 0.2
PSMA1-201ENST00000396394 HYPKQ9NX55 129 aa16.33■□□□□ 0.2
PSMA1-201ENST00000396394 NUP98P52948 1817 aa16.33■□□□□ 0.2
PSMA1-201ENST00000396394 C21orf2O43822 256 aa16.32■□□□□ 0.2
PSMA1-201ENST00000396394 C1QTNF8P60827 252 aa16.32■□□□□ 0.2
PSMA1-201ENST00000396394 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
PSMA1-201ENST00000396394 RNF181Q9P0P0 153 aa16.32■□□□□ 0.2
PSMA1-201ENST00000396394 LMNB1P20700 586 aa16.31■□□□□ 0.2
PSMA1-201ENST00000396394 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
PSMA1-201ENST00000396394 CRY2Q49AN0 593 aa16.31■□□□□ 0.2
PSMA1-201ENST00000396394 ERFEQ4G0M1 354 aa16.31■□□□□ 0.2
PSMA1-201ENST00000396394 NUTM1Q86Y26 1132 aa16.31■□□□□ 0.2
PSMA1-201ENST00000396394 ZNF526Q8TF50 670 aaPredicted RBP16.31■□□□□ 0.2
PSMA1-201ENST00000396394 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
PSMA1-201ENST00000396394 ZC3H4Q9UPT8 1303 aaKnown RBP16.31■□□□□ 0.2
PSMA1-201ENST00000396394 NTSR2O95665 410 aa16.3■□□□□ 0.2
PSMA1-201ENST00000396394 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
PSMA1-201ENST00000396394 ANKRD13DQ6ZTN6 518 aa16.3■□□□□ 0.2
PSMA1-201ENST00000396394 PLBD2Q8NHP8 589 aa16.3■□□□□ 0.2
PSMA1-201ENST00000396394 UTP14AQ9BVJ6 771 aaKnown RBP16.3■□□□□ 0.2
PSMA1-201ENST00000396394 RIC1Q4ADV7 1423 aa16.3■□□□□ 0.2
PSMA1-201ENST00000396394 IL16Q14005 1332 aa16.3■□□□□ 0.2
PSMA1-201ENST00000396394 COL11A2P13942 1736 aaPredicted RBP16.3■□□□□ 0.2
PSMA1-201ENST00000396394 NFKBIEO00221 500 aa16.29■□□□□ 0.2
PSMA1-201ENST00000396394 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
PSMA1-201ENST00000396394 RASSF7Q02833 373 aa16.29■□□□□ 0.2
PSMA1-201ENST00000396394 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
PSMA1-201ENST00000396394 C7orf43Q8WVR3 580 aa16.29■□□□□ 0.2
PSMA1-201ENST00000396394 LTBP3Q9NS15 1303 aa16.29■□□□□ 0.2
PSMA1-201ENST00000396394 ELL2O00472 640 aaPredicted RBP16.29■□□□□ 0.2
PSMA1-201ENST00000396394 PLIN1O60240 522 aa16.29■□□□□ 0.2
PSMA1-201ENST00000396394 C8orf58Q8NAV2 365 aa16.29■□□□□ 0.2
PSMA1-201ENST00000396394 CRBNQ96SW2 442 aa16.29■□□□□ 0.2
PSMA1-201ENST00000396394 ZNF219Q9P2Y4 722 aaPredicted RBP16.29■□□□□ 0.2
PSMA1-201ENST00000396394 ABCC12Q96J65 1359 aa16.28■□□□□ 0.2
PSMA1-201ENST00000396394 MS4A1P11836 297 aa16.28■□□□□ 0.2
PSMA1-201ENST00000396394 NLRP10Q86W26 655 aa16.28■□□□□ 0.2
PSMA1-201ENST00000396394 HOXA10P31260 410 aaPredicted RBP16.27■□□□□ 0.2
PSMA1-201ENST00000396394 PDE3AQ14432 1141 aa16.27■□□□□ 0.2
PSMA1-201ENST00000396394 CCDC30Q5VVM6 783 aa16.27■□□□□ 0.2
PSMA1-201ENST00000396394 NLRP3Q96P20 1036 aa16.27■□□□□ 0.2
PSMA1-201ENST00000396394 KIF3CO14782 793 aa16.26■□□□□ 0.19
PSMA1-201ENST00000396394 PRELPP51888 382 aa16.26■□□□□ 0.19
PSMA1-201ENST00000396394 CCDC93Q567U6 631 aa16.26■□□□□ 0.19
PSMA1-201ENST00000396394 RPGRQ92834 1020 aaKnown RBP16.26■□□□□ 0.19
PSMA1-201ENST00000396394 TAOK3Q9H2K8 898 aa16.26■□□□□ 0.19
PSMA1-201ENST00000396394 SBF1O95248 1867 aa16.26■□□□□ 0.19
PSMA1-201ENST00000396394 KDM2BQ8NHM5 1336 aa16.26■□□□□ 0.19
PSMA1-201ENST00000396394 RTKN2Q8IZC4 609 aa16.25■□□□□ 0.19
PSMA1-201ENST00000396394 TSR2Q969E8 191 aaKnown RBP16.25■□□□□ 0.19
PSMA1-201ENST00000396394 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
PSMA1-201ENST00000396394 SLX4Q8IY92 1834 aa16.25■□□□□ 0.19
PSMA1-201ENST00000396394 CT47B1P0C2W7 299 aaPredicted RBP16.24■□□□□ 0.19
PSMA1-201ENST00000396394 TRIM28Q13263 835 aaKnown RBP16.24■□□□□ 0.19
PSMA1-201ENST00000396394 AAMPQ13685 434 aa16.24■□□□□ 0.19
PSMA1-201ENST00000396394 TSPYL6Q8N831 410 aa16.24■□□□□ 0.19
PSMA1-201ENST00000396394 CRAMP1Q96RY5 1269 aa16.24■□□□□ 0.19
PSMA1-201ENST00000396394 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
PSMA1-201ENST00000396394 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
PSMA1-201ENST00000396394 ARFGEF2Q9Y6D5 1785 aa16.24■□□□□ 0.19
PSMA1-201ENST00000396394 GRIPAP1Q4V328 841 aa16.24■□□□□ 0.19
PSMA1-201ENST00000396394 C20orf194Q5TEA3 1177 aa16.24■□□□□ 0.19
PSMA1-201ENST00000396394 CC2D2BQ6DHV5 1058 aa16.24■□□□□ 0.19
PSMA1-201ENST00000396394 RIC3Q7Z5B4 369 aa16.24■□□□□ 0.19
PSMA1-201ENST00000396394 PHAXQ9H814 394 aaKnown RBP16.24■□□□□ 0.19
PSMA1-201ENST00000396394 SH3TC1Q8TE82 1336 aa16.24■□□□□ 0.19
PSMA1-201ENST00000396394 GLTPD2A6NH11 291 aa16.23■□□□□ 0.19
PSMA1-201ENST00000396394 TWISTNBQ3B726 338 aaPredicted RBP16.23■□□□□ 0.19
PSMA1-201ENST00000396394 MYH16Q9H6N6 1097 aa16.23■□□□□ 0.19
PSMA1-201ENST00000396394 FER1L6Q2WGJ9 1857 aa16.23■□□□□ 0.19
PSMA1-201ENST00000396394 DDX58O95786 925 aaKnown RBP16.22■□□□□ 0.19
PSMA1-201ENST00000396394 FKBP4Q02790 459 aaKnown RBP eCLIP16.22■□□□□ 0.19
PSMA1-201ENST00000396394 DPY19L2Q6NUT2 758 aa16.22■□□□□ 0.19
PSMA1-201ENST00000396394 STK31Q9BXU1 1019 aa16.22■□□□□ 0.19
PSMA1-201ENST00000396394 NMRK2Q9NPI5 230 aa16.22■□□□□ 0.19
PSMA1-201ENST00000396394 TNRC6CQ9HCJ0 1690 aaKnown RBP16.22■□□□□ 0.19
PSMA1-201ENST00000396394 TOMM70O94826 608 aa16.21■□□□□ 0.19
PSMA1-201ENST00000396394 C3orf67Q6ZVT6 689 aa16.21■□□□□ 0.19
PSMA1-201ENST00000396394 CENPQQ7L2Z9 268 aaPredicted RBP16.21■□□□□ 0.19
PSMA1-201ENST00000396394 ATP5J2-PTCD1G3V325 749 aa16.2■□□□□ 0.18
PSMA1-201ENST00000396394 ANKRD36CQ5JPF3 1778 aa16.2■□□□□ 0.18
PSMA1-201ENST00000396394 PSMD1Q99460 953 aa16.2■□□□□ 0.18
PSMA1-201ENST00000396394 HCLS1P14317 486 aaPredicted RBP16.19■□□□□ 0.18
PSMA1-201ENST00000396394 SYNE4Q8N205 404 aa16.19■□□□□ 0.18
PSMA1-201ENST00000396394 RRAGCQ9HB90 399 aa16.19■□□□□ 0.18
PSMA1-201ENST00000396394 BCAR3O75815 825 aa16.19■□□□□ 0.18
PSMA1-201ENST00000396394 BBOX1O75936 387 aa16.19■□□□□ 0.18
PSMA1-201ENST00000396394 RARSP54136 660 aaKnown RBP16.19■□□□□ 0.18
PSMA1-201ENST00000396394 OLFM4Q6UX06 510 aa16.19■□□□□ 0.18
PSMA1-201ENST00000396394 C16orf71Q8IYS4 520 aaPredicted RBP16.19■□□□□ 0.18
PSMA1-201ENST00000396394 CCDC191Q8NCU4 936 aa16.19■□□□□ 0.18
PSMA1-201ENST00000396394 FAM89AQ96GI7 184 aa16.19■□□□□ 0.18
PSMA1-201ENST00000396394 TMX4Q9H1E5 349 aaPredicted RBP16.19■□□□□ 0.18
PSMA1-201ENST00000396394 PPEF1O14829 653 aaPredicted RBP16.18■□□□□ 0.18
PSMA1-201ENST00000396394 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
PSMA1-201ENST00000396394 HSP90B1P14625 803 aaKnown RBP16.18■□□□□ 0.18
PSMA1-201ENST00000396394 KSR2Q6VAB6 950 aa16.18■□□□□ 0.18
PSMA1-201ENST00000396394 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
PSMA1-201ENST00000396394 ZBTB38Q8NAP3 1195 aaPredicted RBP16.18■□□□□ 0.18
PSMA1-201ENST00000396394 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms