RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 DNAJC2Q99543 621 aaKnown RBP21.64■■□□□ 1.05
SREBF1-204ENST00000395756 LSG1Q9H089 658 aaKnown RBP21.64■■□□□ 1.05
SREBF1-204ENST00000395756 TPRNQ4KMQ1 711 aa21.63■■□□□ 1.05
SREBF1-204ENST00000395756 BAG4O95429 457 aaKnown RBP21.63■■□□□ 1.05
SREBF1-204ENST00000395756 SNX14Q9Y5W7 946 aa21.63■■□□□ 1.05
SREBF1-204ENST00000395756 EVI5LQ96CN4 794 aa21.62■■□□□ 1.05
SREBF1-204ENST00000395756 CWC25Q9NXE8 425 aaPredicted RBP21.62■■□□□ 1.05
SREBF1-204ENST00000395756 C5P01031 1676 aa21.62■■□□□ 1.05
SREBF1-204ENST00000395756 STRCQ7RTU9 1775 aa21.61■■□□□ 1.05
SREBF1-204ENST00000395756 NMIQ13287 307 aaPredicted RBP21.61■■□□□ 1.05
SREBF1-204ENST00000395756 DBNDD2Q9BQY9 259 aa21.61■■□□□ 1.05
SREBF1-204ENST00000395756 XIRP1Q702N8 1843 aaKnown RBP21.61■■□□□ 1.05
SREBF1-204ENST00000395756 DBNLQ9UJU6 430 aaKnown RBP21.61■■□□□ 1.05
SREBF1-204ENST00000395756 RAD50Q92878 1312 aa21.61■■□□□ 1.05
SREBF1-204ENST00000395756 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
SREBF1-204ENST00000395756 TIMM10P62072 90 aa21.61■■□□□ 1.05
SREBF1-204ENST00000395756 NUTM2BA6NNL0 878 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-204ENST00000395756 NUTM2EB1AL46 878 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-204ENST00000395756 CASTP20810 708 aaKnown RBP21.6■■□□□ 1.05
SREBF1-204ENST00000395756 RFX5P48382 616 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-204ENST00000395756 NUCB2P80303 420 aa21.6■■□□□ 1.05
SREBF1-204ENST00000395756 NUTM2AQ8IVF1 878 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-204ENST00000395756 RUFY2Q8WXA3 655 aa21.6■■□□□ 1.05
SREBF1-204ENST00000395756 GPTP24298 496 aa21.6■■□□□ 1.05
SREBF1-204ENST00000395756 SIPA1L3O60292 1781 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-204ENST00000395756 ANAPC15P60006 121 aa21.59■■□□□ 1.05
SREBF1-204ENST00000395756 NKX1-1Q15270 411 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-204ENST00000395756 ADCK5Q3MIX3 580 aa21.59■■□□□ 1.05
SREBF1-204ENST00000395756 TNNI3KQ59H18 835 aa21.59■■□□□ 1.05
SREBF1-204ENST00000395756 FPGT-TNNI3KV9GXZ4 949 aa21.59■■□□□ 1.05
SREBF1-204ENST00000395756 AK9Q5TCS8 1911 aa21.59■■□□□ 1.05
SREBF1-204ENST00000395756 GOLGA6L22H0YM25 854 aa21.59■■□□□ 1.05
SREBF1-204ENST00000395756 SYNE4Q8N205 404 aa21.59■■□□□ 1.05
SREBF1-204ENST00000395756 FAM89AQ96GI7 184 aa21.59■■□□□ 1.05
SREBF1-204ENST00000395756 COPRSQ9NQ92 184 aa21.59■■□□□ 1.05
SREBF1-204ENST00000395756 DDX49Q9Y6V7 483 aaKnown RBP21.59■■□□□ 1.05
SREBF1-204ENST00000395756 USP42Q9H9J4 1324 aaKnown RBP21.59■■□□□ 1.05
SREBF1-204ENST00000395756 A0A0D9SFI3 127 aa21.58■■□□□ 1.05
SREBF1-204ENST00000395756 GOLGA6L3A6NEY3 463 aa21.58■■□□□ 1.05
SREBF1-204ENST00000395756 ZDHHC9Q9Y397 364 aa21.58■■□□□ 1.05
SREBF1-204ENST00000395756 JAKMIP1Q96N16 626 aaKnown RBP21.58■■□□□ 1.05
SREBF1-204ENST00000395756 LRRC24Q50LG9 513 aa21.58■■□□□ 1.04
SREBF1-204ENST00000395756 DDX46Q7L014 1031 aaKnown RBP21.58■■□□□ 1.04
SREBF1-204ENST00000395756 TCEANC2Q96MN5 208 aa21.58■■□□□ 1.04
SREBF1-204ENST00000395756 CWC22Q9HCG8 908 aaKnown RBP21.58■■□□□ 1.04
SREBF1-204ENST00000395756 CASP7P55210 303 aa21.57■■□□□ 1.04
SREBF1-204ENST00000395756 FOXO4P98177 505 aa21.57■■□□□ 1.04
SREBF1-204ENST00000395756 SLFNL1Q499Z3 407 aa21.57■■□□□ 1.04
SREBF1-204ENST00000395756 PRPF40AO75400 957 aaKnown RBP21.57■■□□□ 1.04
SREBF1-204ENST00000395756 ATG3Q9NT62 314 aa21.57■■□□□ 1.04
SREBF1-204ENST00000395756 AK2P54819 239 aa21.56■■□□□ 1.04
SREBF1-204ENST00000395756 COL9A3Q14050 684 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-204ENST00000395756 H7C1W4 665 aa21.56■■□□□ 1.04
SREBF1-204ENST00000395756 PIP4K2BP78356 416 aa21.56■■□□□ 1.04
SREBF1-204ENST00000395756 PUS3Q9BZE2 481 aaKnown RBP21.56■■□□□ 1.04
SREBF1-204ENST00000395756 RBM10P98175 930 aaKnown RBP21.55■■□□□ 1.04
SREBF1-204ENST00000395756 EXOC5O00471 708 aa21.55■■□□□ 1.04
SREBF1-204ENST00000395756 RABL6Q3YEC7 729 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-204ENST00000395756 PANK2Q9BZ23 570 aa21.55■■□□□ 1.04
SREBF1-204ENST00000395756 ADAMTS7Q9UKP4 1686 aa21.55■■□□□ 1.04
SREBF1-204ENST00000395756 ACSBG1Q96GR2 724 aa21.55■■□□□ 1.04
SREBF1-204ENST00000395756 SEC62Q99442 399 aaKnown RBP21.55■■□□□ 1.04
SREBF1-204ENST00000395756 RBM8AQ9Y5S9 174 aaKnown RBP21.55■■□□□ 1.04
SREBF1-204ENST00000395756 MCM2P49736 904 aa21.54■■□□□ 1.04
SREBF1-204ENST00000395756 CCDC129Q6ZRS4 1044 aa21.54■■□□□ 1.04
SREBF1-204ENST00000395756 ZNF589Q86UQ0 364 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-204ENST00000395756 PRIM1P49642 420 aaKnown RBP21.54■■□□□ 1.04
SREBF1-204ENST00000395756 FAM177BA6PVY3 158 aa21.53■■□□□ 1.04
SREBF1-204ENST00000395756 TAF6LQ9Y6J9 622 aa21.53■■□□□ 1.04
SREBF1-204ENST00000395756 MRC1P22897 1456 aa21.53■■□□□ 1.04
SREBF1-204ENST00000395756 HLFQ16534 295 aa21.53■■□□□ 1.04
SREBF1-204ENST00000395756 TBC1D2BQ9UPU7 963 aa21.53■■□□□ 1.04
SREBF1-204ENST00000395756 XRCC6P12956 609 aaKnown RBP eCLIP21.52■■□□□ 1.042e-7■■■□□ 15.7
SREBF1-204ENST00000395756 CRYBG1Q9Y4K1 1723 aa21.52■■□□□ 1.04
SREBF1-204ENST00000395756 N4BP2Q86UW6 1770 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-204ENST00000395756 STARD3NLO95772 234 aa21.52■■□□□ 1.04
SREBF1-204ENST00000395756 HSP90AA2PQ14568 343 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-204ENST00000395756 KIF6Q6ZMV9 814 aa21.52■■□□□ 1.04
SREBF1-204ENST00000395756 CCDC191Q8NCU4 936 aa21.52■■□□□ 1.04
SREBF1-204ENST00000395756 CCDC171Q6TFL3 1326 aa21.52■■□□□ 1.03
SREBF1-204ENST00000395756 CYP2E1P05181 493 aaPredicted RBP21.51■■□□□ 1.03
SREBF1-204ENST00000395756 RUFY3Q7L099 469 aa21.51■■□□□ 1.03
SREBF1-204ENST00000395756 GDPD2Q9HCC8 539 aa21.51■■□□□ 1.03
SREBF1-204ENST00000395756 GOLIM4O00461 696 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 LARGE1O95461 756 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 ZKSCAN1P17029 563 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-204ENST00000395756 SLC4A9Q96Q91 983 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 TCIRG1Q13488 830 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 TAF7LQ5H9L4 462 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 CREB3L3Q68CJ9 461 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 ATG9AQ7Z3C6 839 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 PDRG1Q9NUG6 133 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 ERBB4Q15303 1308 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 CCDC57Q2TAC2 916 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 CAVIN1Q6NZI2 390 aaKnown RBP21.5■■□□□ 1.03
SREBF1-204ENST00000395756 GAS2L3Q86XJ1 694 aa21.5■■□□□ 1.03
SREBF1-204ENST00000395756 SNRKQ9NRH2 765 aa21.49■■□□□ 1.03
SREBF1-204ENST00000395756 CUL4AQ13619 759 aa21.49■■□□□ 1.03
SREBF1-204ENST00000395756 CCDC83Q8IWF9 413 aa21.49■■□□□ 1.03
SREBF1-204ENST00000395756 NECAB1Q8N987 351 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms