RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 RASSF10A6NK89 507 aa17.84■□□□□ 0.45
SCAF11-203ENST00000395453 HSPA8P11142 646 aaKnown RBP17.84■□□□□ 0.45
SCAF11-203ENST00000395453 DEFB115Q30KQ5 88 aa17.84■□□□□ 0.45
SCAF11-203ENST00000395453 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
SCAF11-203ENST00000395453 CCDC93Q567U6 631 aa17.84■□□□□ 0.45
SCAF11-203ENST00000395453 LAMB4A4D0S4 1761 aa17.83■□□□□ 0.45
SCAF11-203ENST00000395453 PNMA8AQ86V59 439 aaPredicted RBP17.83■□□□□ 0.44
SCAF11-203ENST00000395453 C7orf43Q8WVR3 580 aa17.83■□□□□ 0.44
SCAF11-203ENST00000395453 ZNF652Q9Y2D9 606 aa17.83■□□□□ 0.44
SCAF11-203ENST00000395453 EPHX2P34913 555 aa17.82■□□□□ 0.44
SCAF11-203ENST00000395453 TMPOP42166 694 aaKnown RBP17.82■□□□□ 0.44
SCAF11-203ENST00000395453 RIPK4P57078 832 aa17.82■□□□□ 0.44
SCAF11-203ENST00000395453 CNTROBQ8N137 903 aa17.82■□□□□ 0.44
SCAF11-203ENST00000395453 FKBP4Q02790 459 aaKnown RBP eCLIP17.81■□□□□ 0.44
SCAF11-203ENST00000395453 BABAM1Q9NWV8 329 aa17.81■□□□□ 0.44
SCAF11-203ENST00000395453 WDR33Q9C0J8 1336 aaKnown RBP17.81■□□□□ 0.44
SCAF11-203ENST00000395453 ZNF541Q9H0D2 1346 aa17.81■□□□□ 0.44
SCAF11-203ENST00000395453 ARFGEF2Q9Y6D5 1785 aa17.81■□□□□ 0.44
SCAF11-203ENST00000395453 CACNA1SQ13698 1873 aa17.8■□□□□ 0.44
SCAF11-203ENST00000395453 NPR1P16066 1061 aa17.8■□□□□ 0.44
SCAF11-203ENST00000395453 KLRG2A4D1S0 409 aaPredicted RBP17.79■□□□□ 0.44
SCAF11-203ENST00000395453 ERVV-1B6SEH8 477 aa17.79■□□□□ 0.44
SCAF11-203ENST00000395453 HLFQ16534 295 aa17.79■□□□□ 0.44
SCAF11-203ENST00000395453 NBPF5PQ86XG9 351 aaPredicted RBP17.79■□□□□ 0.44
SCAF11-203ENST00000395453 ZNF277Q9NRM2 450 aaPredicted RBP17.79■□□□□ 0.44
SCAF11-203ENST00000395453 ABT1Q9ULW3 272 aaKnown RBP17.79■□□□□ 0.44
SCAF11-203ENST00000395453 MAP1SQ66K74 1059 aaPredicted RBP17.78■□□□□ 0.44
SCAF11-203ENST00000395453 TPTE2Q6XPS3 522 aa17.78■□□□□ 0.44
SCAF11-203ENST00000395453 RTKN2Q8IZC4 609 aa17.78■□□□□ 0.44
SCAF11-203ENST00000395453 PRKRIP1Q9H875 184 aaPredicted RBP17.78■□□□□ 0.44
SCAF11-203ENST00000395453 NIP7Q9Y221 180 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCAF11-203ENST00000395453 MLLT1Q03111 559 aaPredicted RBP17.77■□□□□ 0.44
SCAF11-203ENST00000395453 LMOD3Q0VAK6 560 aa17.77■□□□□ 0.44
SCAF11-203ENST00000395453 TSPYL4Q9UJ04 414 aa17.77■□□□□ 0.44
SCAF11-203ENST00000395453 RRP7AQ9Y3A4 280 aaKnown RBP17.77■□□□□ 0.44
SCAF11-203ENST00000395453 ADAMTSL1Q8N6G6 1762 aa17.77■□□□□ 0.44
SCAF11-203ENST00000395453 RNF123Q5XPI4 1314 aa17.77■□□□□ 0.44
SCAF11-203ENST00000395453 FZD9O00144 591 aa17.76■□□□□ 0.43
SCAF11-203ENST00000395453 GPC2Q8N158 579 aa17.76■□□□□ 0.43
SCAF11-203ENST00000395453 RUNDC1Q96C34 613 aa17.76■□□□□ 0.43
SCAF11-203ENST00000395453 BEGAINQ9BUH8 593 aa17.76■□□□□ 0.43
SCAF11-203ENST00000395453 ERBB4Q15303 1308 aa17.76■□□□□ 0.43
SCAF11-203ENST00000395453 MAP3K15Q6ZN16 1313 aa17.76■□□□□ 0.43
SCAF11-203ENST00000395453 NUP98P52948 1817 aa17.75■□□□□ 0.43
SCAF11-203ENST00000395453 CCDC85CA6NKD9 419 aa17.75■□□□□ 0.43
SCAF11-203ENST00000395453 IARSP41252 1262 aaKnown RBP17.75■□□□□ 0.43
SCAF11-203ENST00000395453 TTLL7Q6ZT98 887 aa17.75■□□□□ 0.43
SCAF11-203ENST00000395453 CCDC146Q8IYE0 955 aa17.75■□□□□ 0.43
SCAF11-203ENST00000395453 NGEFQ8N5V2 710 aa17.75■□□□□ 0.43
SCAF11-203ENST00000395453 DDX21Q9NR30 783 aaKnown RBP eCLIP17.75■□□□□ 0.43
SCAF11-203ENST00000395453 PCDH10Q9P2E7 1040 aa17.75■□□□□ 0.43
SCAF11-203ENST00000395453 ADAMTS8Q9UP79 889 aa17.75■□□□□ 0.43
SCAF11-203ENST00000395453 ECE1P42892 770 aa17.74■□□□□ 0.43
SCAF11-203ENST00000395453 RGS19P49795 217 aa17.74■□□□□ 0.43
SCAF11-203ENST00000395453 PDIA6Q15084 440 aa17.74■□□□□ 0.43
SCAF11-203ENST00000395453 LRP10Q7Z4F1 713 aa17.74■□□□□ 0.43
SCAF11-203ENST00000395453 PIP4P2Q8N4L2 257 aa17.74■□□□□ 0.43
SCAF11-203ENST00000395453 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
SCAF11-203ENST00000395453 CHL1O00533 1208 aa17.73■□□□□ 0.43
SCAF11-203ENST00000395453 MYL6BP14649 208 aa17.73■□□□□ 0.43
SCAF11-203ENST00000395453 ALDH1B1P30837 517 aa17.73■□□□□ 0.43
SCAF11-203ENST00000395453 WDR43Q15061 677 aaKnown RBP eCLIP17.73■□□□□ 0.43
SCAF11-203ENST00000395453 SYNE4Q8N205 404 aa17.73■□□□□ 0.43
SCAF11-203ENST00000395453 JDP2Q8WYK2 163 aa17.73■□□□□ 0.43
SCAF11-203ENST00000395453 NEUROD2Q15784 382 aa17.72■□□□□ 0.43
SCAF11-203ENST00000395453 OLFM4Q6UX06 510 aa17.72■□□□□ 0.43
SCAF11-203ENST00000395453 KIF6Q6ZMV9 814 aa17.72■□□□□ 0.43
SCAF11-203ENST00000395453 SP7Q8TDD2 431 aaPredicted RBP17.72■□□□□ 0.43
SCAF11-203ENST00000395453 CAPNS2Q96L46 248 aa17.72■□□□□ 0.43
SCAF11-203ENST00000395453 LMOD1P29536 600 aaPredicted RBP17.72■□□□□ 0.43
SCAF11-203ENST00000395453 PAXIP1Q6ZW49 1069 aaPredicted RBP17.72■□□□□ 0.43
SCAF11-203ENST00000395453 ZNF34Q8IZ26 560 aa17.72■□□□□ 0.43
SCAF11-203ENST00000395453 GPR101Q96P66 508 aaPredicted RBP17.72■□□□□ 0.43
SCAF11-203ENST00000395453 NYXQ9GZU5 481 aa17.72■□□□□ 0.43
SCAF11-203ENST00000395453 FAM177BA6PVY3 158 aa17.71■□□□□ 0.42
SCAF11-203ENST00000395453 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.42
SCAF11-203ENST00000395453 GIGYF2Q6Y7W6 1299 aaKnown RBP17.71■□□□□ 0.42
SCAF11-203ENST00000395453 PSMD1Q99460 953 aa17.71■□□□□ 0.42
SCAF11-203ENST00000395453 EIF2S2P20042 333 aaKnown RBP17.7■□□□□ 0.42
SCAF11-203ENST00000395453 ZBTB3Q9H5J0 574 aa17.7■□□□□ 0.42
SCAF11-203ENST00000395453 GJA3Q9Y6H8 435 aa17.7■□□□□ 0.42
SCAF11-203ENST00000395453 UBN2Q6ZU65 1347 aa17.69■□□□□ 0.42
SCAF11-203ENST00000395453 IBTKQ9P2D0 1353 aaPredicted RBP17.69■□□□□ 0.42
SCAF11-203ENST00000395453 GTF2E1P29083 439 aaPredicted RBP17.69■□□□□ 0.42
SCAF11-203ENST00000395453 GRM1Q13255 1194 aa17.69■□□□□ 0.42
SCAF11-203ENST00000395453 PROSER3Q2NL68 480 aa17.69■□□□□ 0.42
SCAF11-203ENST00000395453 CRY2Q49AN0 593 aa17.69■□□□□ 0.42
SCAF11-203ENST00000395453 CYP4F22Q6NT55 531 aa17.69■□□□□ 0.42
SCAF11-203ENST00000395453 THSD7BQ9C0I4 1608 aa17.68■□□□□ 0.42
SCAF11-203ENST00000395453 PITPNM1O00562 1244 aa17.68■□□□□ 0.42
SCAF11-203ENST00000395453 MAP2K2P36507 400 aa17.68■□□□□ 0.42
SCAF11-203ENST00000395453 SUSD4Q5VX71 490 aa17.68■□□□□ 0.42
SCAF11-203ENST00000395453 CC2D2BQ6DHV5 1058 aa17.68■□□□□ 0.42
SCAF11-203ENST00000395453 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
SCAF11-203ENST00000395453 GPTP24298 496 aa17.67■□□□□ 0.42
SCAF11-203ENST00000395453 RIC1Q4ADV7 1423 aa17.67■□□□□ 0.42
SCAF11-203ENST00000395453 USP50Q70EL3 339 aaPredicted RBP17.67■□□□□ 0.42
SCAF11-203ENST00000395453 ABCC12Q96J65 1359 aa17.67■□□□□ 0.42
SCAF11-203ENST00000395453 CA12O43570 354 aa17.66■□□□□ 0.42
SCAF11-203ENST00000395453 NTSR2O95665 410 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms